Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01061 AATTAAAAAAAAAAAAAAAAAAGGTCTTAGAGAGAGAGAGAGAGAGAGATAGATGAACTTGAATTGGAAATCTCTCTCCAGAAAAGCCACAAGAGAAGAAGCAAATCCACAGACCCTTAAGCAGTAAAAAGCCTACCTTTTTTCTCTTTTTTCTTGTATAATTTCAACTGTTTATTATTGTTTTGGTCGTTTTTGGATCTCCAATTTGGTTTTTTGAGTACCCTTTTTGGGTATTATTTGGGGGAATTAAGGGTTTCATATATAAAAAGAAAAAAAGTTGGGTTTTATTTGGAGATTTGAGTGAAATTTAGGGGTGAAAAGAGGGAAGAAAAATGGGAAGAGGGAAGATAGTGATAAGAAGAATAGACAATTCAACAAGCAGGCAAGTAACTTTTTCAAAGAGAAGAAGTGGATTATTGAAAAAAGCTAGAGAGCTTTCAATTCTTTGTGATGCTGAAGTTGGATTGATCATTTTTTCAAGTACTGGCAAACTCTATGATTATTCCAGTTCCAGCATAAGGTCGATTACTGATCGCTACAACAAGATGAAAGAGGAGCAAAATCAGCTGATGAACTCTGTTTCAGAACTCCAGTTTTGGAAAAGAGAGGCAGCTGCTTTGAAGCAACAGCTGCATTACATGCAAGAATGTCACAGACACCTGATGGGTGAGGAACTATCTGGCCTGAGTGTCAAAGATCTACAAAATCTGGAAAGCCAGTTGGAAATGAGTTTGAAAGGTGTCCGTGTGAAGAAGGAAAAGATTTTAAGTGATGAAATTACTGAACTAAGACAGAAGGGGAATCATATGCATCAAGAAAATGTGGAACTCTACAAGAAATTAGATATGATTCGTAAGGAAAATGCAGAACTGCAAATGAAGGCCTATGGACCAATGGAAGTGGATAAAACGAGCAGTAGCTCAGTTCATCAATTCACTATCACCAATAGATACAGTATGCCTGCTCCCGTCCATCTACAGCTAAGACAGCCACAACCACAAAACAATGAAACACCAGTACCAGGGATAAAGCTGGGGTATGTTCAAGCAATCTGTATTTATGACATGAAATAAATTCCCTATCAAATTCATCTGAATATCAATCTATACTACTCAACTTTTACTCCCAAGCCATACTGAAATAGATATAATTGAAACTTGCAACAGATTGCAACTGCAATAACAGCAGTTAGATCATGGATGATTTATCCATGGTCATTTCATCAACTTGTCATACAGTACGGTCATGTTCAACATGAAGGTGTCTCCTGCTTCAGTCACTAGTGCATTAATGTCACCAGATCCATCACATTTGGTATGCAATGTTCTTCAAACTCTATATATGAGATAAATTTAGCAGCAAGACCAGCTACATAAGTAAGTTTACCAATAATGACAATGCATCATATGTACCATGTGTTGTTCTAGCTGTTTTTAACGTTTGTTGTGTTAAGTAATTGACCAGACTCTAAAGTTGTGATGCCAATTAGTTGAATGAAAGTTAATGTTCATCCAATCTTATATATGGCAGTACCAAGCTGGTAGACACTTGATCGCATATGAGATGCCTGCAGTGTGGGCTTCCTTTTGTTGAGTTGCCAAAATTAACCATATTAAATAATCCCTTATCCTAAAAGAGTGAGCTGTTTTGGGATTAAAATAACCATTCATATACGTCACTAACACTCCACTTGTGTGTATTCTCAAACTTAACTTGGATGATTAATGAATGAGATCACCAATGTAAAGCAGCTGTTAGACTATGAAATTTTAAACCAGTAAAGGAATTTAAAACTAAAGGTTTCTCTCCATTCACTTTTATAATCACCAATCCTTAAAACTTGAGTTGTTAGCTTATGATTATTTTGTTTAAATACTTCAAGCACTCTGCAATATCTGCCCTGTCATACCCAACTTCAATTCATAATATATAGAAATGTCAATCTATGACTAATCCTTGAATTGATTTTCTTTTTCTATTTAAGGTGTTTCAAATATGGCTAGAATGGTTCATTGAGAACCAAAAATCTATGATAGTAACTAGAAAGTGTTGCTGGAGTAGCCAGTTTGCAATTTCCAAAAGAAAGGGGCACTTCTCCATTTCTTCTTTGTATTTTGTAATTTGGATATGTTATATACTTTTTCCACAATTATATTACGCTCTCAGGTTATGTTTACTTGTTTACGCTGGTGGTGGTATTCAATCTCCTTTCAATATCCCAAAGTTGGTTTGTATGGAAAAAGAAATTTTATTCCTCCAGCTCCATGGCAATGTGAAACCCAAAGGACCTCTGACTTTCCACAGACAGGAATAGGCATCATTTCAACTAACTTAAACCAATTTTTAGGATACAACTAAACTTTGTAATCCTATATCTTCGCAATATAAATGTATATCTTTGTGCACATAGGGGCGAGAAACAAGGTCCTTTTGGCTAAATGGCCTTGTGATTCCATCATGAATCTGACATCTTATGGCCCAAGGTCAATGTGGCAAGTATGACCCTCACCCTTTTGAATAGACCGTTGGTAGGGTTAAAGCACTTCCAGAAACCCATGAAACTTCTCTCTTTTTTCTATCCCAATTTGTTCTGCATGTGGTGGGAGATGGGAGGAATGCTTACTTTTGGGAGAATAAGTGAACGAGGGTAGAACCATTTGTTCCTTATCCCCAATTTATATTTGTTGTCCATTTTGAGAAATCATTTGATGGCTTTGATCCCCTCTCGCTCTGAGAACCTGCCTTCTTCTTGGGAGTTCTGTCACCTGTTGACATTTAAGGAAACAACAGATATTTTGCTCTATTATCTTTGCTTGGCAACTTTCGCTTTAGCCCTGGTAGGATGGATATTTGCCTTTCAAGTCCCTGTCTACCAGGCTTCTCCTCCAATCCTTTATTTCAATGTTCGGTTAGTTCCTCCTCCTCAAGTGATTCTATTTTTTCCTTTGTTCGAAAGATGAAAATTCTCAGGAAGGCTAAGTTCTTCAAATGACAAGCTATGCATGAAAGAGTTAACACCTTGGAACAGATCTCAGCTAGGAAGACCATTTTGGTCGGTTGTCTTTGTTGTATTATTTGCAGGAGGGCACAATATAGGACCTTGATCATAACGTCTGAAGATGTGATTTTTCTAATGCTATTTGGAGATGTTTTTGTGAGGTGTTCAATTTTTACTTAGCTCTCATTGTGTAGGAAGACAATCAAGGAGTTTCTTCTCTATTCGCATTTTCATGAGAAAATATTATTCTCGTGGTAGGTCAGGTGTGCTATTTTGTGGGATCTATGGAGTGAGGGAAATAATAAAATCTTTAGAGACAGGTCTTACAGTGAATGCTTGGTCCCTTGTTAGATTTAGATTCTATGTTTCTATTTGGGCTTCAGTGACATGGCCACTTTGTAATTACCCTATTGATCTTATGTTACTTGAGTTAAGTCCATTATTGTAGTTTGGCTCCCTTTGGGAGATTTATTTTTATAAATCTGTGAATTCTTTCATTTTTCTCATGAAAGTTTGGTTATTCATCAATAAATAAATAAACAAATAATATATTTATACATGCAAAAGAATATACATATGCATGATATAATTAGTATAAAGTAGAAGTCAGAAGTAATAGACATAAGGCTAAGTGGATTGAAAGAATGTATAGCATACC 3656 35.97 MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSSSIRSITDRYNKMKEEQNQLMNSVSELQFWKREAAALKQQLHYMQECHRHLMGEELSGLSVKDLQNLESQLEMSLKGVRVKKEKILSDEITELRQKGNHMHQENVELYKKLDMIRKENAELQMKAYGPMEVDKTSSSSVHQFTITNRYSMPAPVHLQLRQPQPQNNETPVPGIKLGYVQAICIYDMK 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 31391637 31407275 + XM_039049633.1 Bhi11g01061 49773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01061 246 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Bhi11g01061 246 Pfam K-box region 84 170 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bhi11g01061 246 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 235 - -
Bhi11g01061 246 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bhi11g01061 246 Gene3D - 13 93 IPR036879 GO:0003677|GO:0046983
Bhi11g01061 246 SUPERFAMILY SRF-like 2 90 IPR036879 GO:0003677|GO:0046983
Bhi11g01061 246 Coils Coil 163 183 - -
Bhi11g01061 246 CDD MADS_MEF2_like 2 76 IPR033896 GO:0000977|GO:0045944
Bhi11g01061 246 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bhi11g01061 246 ProSiteProfiles K-box domain profile. 86 176 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bhi11g01061 246 Coils Coil 62 99 - -
Bhi11g01061 246 PANTHER - 1 235 - -
Bhi11g01061 246 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bhi11g01061 246 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bhi11g01061 246 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bhi11g01061 246 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02527 Bhi-Chr9:68307216 Bhi11g01061 Bhi-Chr11:31391637 1.45E-101 dispersed
Bhi10g01008 Bhi-Chr10:20345473 Bhi11g01061 Bhi-Chr11:31391637 1.18E-48 dispersed
Bhi10g01009 Bhi-Chr10:20345473 Bhi11g01061 Bhi-Chr11:31391637 1.18E-48 dispersed
Bhi11g01061 Bhi-Chr11:31391637 Bhi11g01063 Bhi-Chr11:31391637 1.55E-100 dispersed
Bhi11g01061 Bhi-Chr11:31391637 Bhi11g01062 Bhi-Chr11:31391637 6.45E-177 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2356 PF01486 K-box 4.00E-27 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01061 K09264 - csv:101203098 416.387