Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01062 AATTAAAAAAAAAAAAAAAAAAGGTCTTAGAGAGAGAGAGAGAGAGAGATAGATGAACTTGAATTGGAAATCTCTCTCCAGAAAAGCCACAAGAGAAGAAGCAAATCCACAGACCCTTAAGCAGTAAAAAGCCTACCTTTTTTCTCTTTTTTCTTGTATAATTTCAACTGTTTATTATTGTTTTGGTCGTTTTTGGATCTCCAATTTGGTTTTTTGAGTACCCTTTTTGGGTATTATTTGGGGGAATTAAGGGTTTCATATATAAAAAGAAAAAAAGTTGGGTTTTATTTGGAGATTTGAGTGAAATTTAGGGGTGAAAAGAGGGAAGAAAAATGGGAAGAGGGAAGATAGTGATAAGAAGAATAGACAATTCAACAAGCAGGCAAGTAACTTTTTCAAAGAGAAGAAGTGGATTATTGAAAAAAGCTAGAGAGCTTTCAATTCTTTGTGATGCTGAAGTTGGATTGATCATTTTTTCAAGTACTGGCAAACTCTATGATTATTCCAGTTCCAGCATAAGGTCGATTACTGATCGCTACAACAAGATGAAAGAGGAGCAAAATCAGCTGATGAACTCTGTTTCAGAACTCCAGTTTTGGAAAAGAGAGGCAGCTGCTTTGAAGCAACAGCTGCATTACATGCAAGAATGTCACAGACACCTGATGGGTGAGGAACTATCTGGCCTGAGTGTCAAAGATCTACAAAATCTGGAAAGCCAGTTGGAAATGAGTTTGAAAGGTGTCCGTGTGAAGAAGGAAAAGATTTTAAGTGATGAAATTACTGAACTAAGACAGAAGGGGAATCATATGCATCAAGAAAATGTGGAACTCTACAAGAAATTAGATATGATTCGTAAGGAAAATGCAGAACTGCAAATGAAGGCCTATGGACCAATGGAAGTGGATAAAACGAGCAGTAGCTCAGTTCATCAATTCACTATCACCAATAGATACAGTATGCCTGCTCCCGTCCATCTACAGCTAAGACAGCCACAACCACAAAACAATGAAACACCAGTACCAGGGATAAAGCTGGGATTGCAACTGCAATAACAGCAGTTAGATCATGGATGATTTATCCATGGTCATTTCATCAACTTGTCATACAGTACGGTCATGTTCAACATGAAGGTGTCTCCTGCTTCAGTCACTAGTGCATTAATGTCACCAGATCCATCACATTTGGTATGCAATGTTCTTCAAACTCTATATATGAGATAAATTTAGCAGCAAGACCAGCTACATAAGTAAGTTTACCAATAATGACAATGCATCATATGTACCATGTGTTGTTCTAGCTGTTTTTAACGTTTGTTGTGTTAAGTAATTGACCAGACTCTAAAGTTGTGATGCCAATTAGTTGAATGAAAGTTAATGTTCATCCAATCTTATATATGGCAGTACCAAGCTGGTAGACACTTGATCGCATATGAGATGCCTGCAGTGTGGGCTTCCTTTTGTTGAGTTGCCAAAATTAACCATATTAAATAATCCCTTATCCTAAAAGAGTGAGCTGTTTTGGGATTAAAATAACCATTCATATACGTCACTAACACTCCACTTGTGTGTATTCTCAAACTTAACTTGGATGATTAATGAATGAGATCACCAATGTAAAGCAGCTGTTAGACTATGAAATTTTAAACCAGTAAAGGAATTTAAAACTAAAGGTTTCTCTCCATTCACTTTTATAATCACCAATCCTTAAAACTTGAGTTGTTAGCTTATGATTATTTTGTTTAAATACTTCAAGCACTCTGCAATATCTGCCCTGTCATACCCAACTTCAATTCATAATATATAGAAATGTCAATCTATGACTAATCCTTGAATTGATTTTCTTTTTCTATTTAAGGTGTTTCAAATATGGCTAGAATGGTTCATTGAGAACCAAAAATCTATGATAGTAACTAGAAAGTGTTGCTGGAGTAGCCAGTTTGCAATTTCCAAAAGAAAGGGGCACTTCTCCATTTCTTCTTTGTATTTTGTAATTTGGATATGTTATATACTTTTTCCACAATTATATTACGCTCTCAGGTTATGTTTACTTGTTTACGCTGGTGGTGGTATTCAATCTCCTTTCAATATCCCAAAGTTGGTTTGTATGGAAAAAGAAATTTTATTCCTCCAGCTCCATGGCAATGTGAAACCCAAAGGACCTCTGACTTTCCACAGACAGGAATAGGCATCATTTCAACTAACTTAAACCAATTTTTAGGATACAACTAAACTTTGTAATCCTATATCTTCGCAATATAAATGTATATCTTTGTGCACATAGGGGCGAGAAACAAGGTCCTTTTGGCTAAATGGCCTTGTGATTCCATCATGAATCTGACATCTTATGGCCCAAGGTCAATGTGGCAAGTATGACCCTCACCCTTTTGAATAGACCGTTGGTAGGGTTAAAGCACTTCCAGAAACCCATGAAACTTCTCTCTTTTTTCTATCCCAATTTGTTCTGCATGTGGTGGGAGATGGGAGGAATGCTTACTTTTGGGAGAATAAGTGAACGAGGGTAGAACCATTTGTTCCTTATCCCCAATTTATATTTGTTGTCCATTTTGAGAAATCATTTGATGGCTTTGATCCCCTCTCGCTCTGAGAACCTGCCTTCTTCTTGGGAGTTCTGTCACCTGTTGACATTTAAGGAAACAACAGATATTTTGCTCTATTATCTTTGCTTGGCAACTTTCGCTTTAGCCCTGGTAGGATGGATATTTGCCTTTCAAGTCCCTGTCTACCAGGCTTCTCCTCCAATCCTTTATTTCAATGTTCGGTTAGTTCCTCCTCCTCAAGTGATTCTATTTTTTCCTTTGTTCGAAAGATGAAAATTCTCAGGAAGGCTAAGTTCTTCAAATGACAAGCTATGCATGAAAGAGTTAACACCTTGGAACAGATCTCAGCTAGGAAGACCATTTTGGTCGGTTGTCTTTGTTGTATTATTTGCAGGAGGGCACAATATAGGACCTTGATCATAACGTCTGAAGATGTGATTTTTCTAATGCTATTTGGAGATGTTTTTGTGAGGTGTTCAATTTTTACTTAGCTCTCATTGTGTAGGAAGACAATCAAGGAGTTTCTTCTCTATTCGCATTTTCATGAGAAAATATTATTCTCGTGGTAGGTCAGGTGTGCTATTTTGTGGGATCTATGGAGTGAGGGAAATAATAAAATCTTTAGAGACAGGTCTTACAGTGAATGCTTGGTCCCTTGTTAGATTTAGATTCTATGTTTCTATTTGGGCTTCAGTGACATGGCCACTTTGTAATTACCCTATTGATCTTATGTTACTTGAGTTAAGTCCATTATTGTAGTTTGGCTCCCTTTGGGAGATTTATTTTTATAAATCTGTGAATTCTTTCATTTTTCTCATGAAAGTTTGGTTATTCATCAATAAATAAATAAACAAATAATATATTTATACATGCAAAAGAATATACATATGCATGATATAATTAGTATAAAGTAGAAGTCAGAAGTAATAGACATAAGGCTAAGTGGATTGAAAGAATGTATAGCATACC 3526 36.19 MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSSSIRSITDRYNKMKEEQNQLMNSVSELQFWKREAAALKQQLHYMQECHRHLMGEELSGLSVKDLQNLESQLEMSLKGVRVKKEKILSDEITELRQKGNHMHQENVELYKKLDMIRKENAELQMKAYGPMEVDKTSSSSVHQFTITNRYSMPAPVHLQLRQPQPQNNETPVPGIKLGLQLQ 239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 31391637 31407275 + XM_039049634.1 Bhi11g01062 49774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01062 239 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Bhi11g01062 239 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 239 - -
Bhi11g01062 239 SUPERFAMILY SRF-like 2 90 IPR036879 GO:0003677|GO:0046983
Bhi11g01062 239 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bhi11g01062 239 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bhi11g01062 239 Coils Coil 163 183 - -
Bhi11g01062 239 CDD MADS_MEF2_like 2 76 IPR033896 GO:0000977|GO:0045944
Bhi11g01062 239 Pfam K-box region 84 170 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bhi11g01062 239 ProSiteProfiles K-box domain profile. 86 176 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bhi11g01062 239 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bhi11g01062 239 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bhi11g01062 239 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bhi11g01062 239 PANTHER - 1 239 - -
Bhi11g01062 239 Coils Coil 62 99 - -
Bhi11g01062 239 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bhi11g01062 239 MobiDBLite consensus disorder prediction 219 239 - -
Bhi11g01062 239 Gene3D - 13 93 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02528 Bhi-Chr9:68307217 Bhi11g01062 Bhi-Chr11:31391637 4.17E-103 dispersed
Bhi11g01061 Bhi-Chr11:31391637 Bhi11g01062 Bhi-Chr11:31391637 6.45E-177 tandem
Bhi11g01062 Bhi-Chr11:31391637 Bhi11g01063 Bhi-Chr11:31391637 6.08E-101 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2357 PF01486 K-box 3.70E-27 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01062 K09264 - csv:101203098 423.32