Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01063 AATTAAAAAAAAAAAAAAAAAAGGTCTTAGAGAGAGAGAGAGAGAGAGATAGATGAACTTGAATTGGAAATCTCTCTCCAGAAAAGCCACAAGAGAAGAAGCAAATCCACAGACCCTTAAGCAGTAAAAAGCCTACCTTTTTTCTCTTTTTTCTTGTATAATTTCAACTGTTTATTATTGTTTTGGTCGTTTTTGGATCTCCAATTTGGTTTTTTGAGTACCCTTTTTGGGTATTATTTGGGGGAATTAAGGGTTTCATATATAAAAAGAAAAAAAGTTGGGTTTTATTTGGAGATTTGAGTGAAATTTAGGGGTGAAAAGAGGGAAGAAAAATGGGAAGAGGGAAGATAGTGATAAGAAGAATAGACAATTCAACAAGCAGGCAAGTAACTTTTTCAAAGAGAAGAAGTGGATTATTGAAAAAAGCTAGAGAGCTTTCAATTCTTTGTGATGCTGAAGTTGGATTGATCATTTTTTCAAGTACTGGCAAACTCTATGATTATTCCAGTTCCAGCATAAGGTCGATTACTGATCGCTACAACAAGATGAAAGAGGAGCAAAATCAGCTGATGAACTCTGTTTCAGAACTCCAGTTTTGGAAAAGAGAGGCAGCTGCTTTGAAGCAACAGCTGCATTACATGCAAGAATGTCACAGACACCTGATGGGTGAGGAACTATCTGGCCTGAGTGTCAAAGATCTACAAAATCTGGAAAGCCAGTTGGAAATGAGTTTGAAAGGTGTCCGTGTGAAGAAGGTATAAACTATGAAGAGACCTCAATAAAAACATACACCTGATAAAGCATATTGTATGCGGATGTTTATGTGTTCTTGTATTTTTCTTGCAGGAAAAGATTTTAAGTGATGAAATTACTGAACTAAGACAGAAGGTTTTCCCCACTGTAAATATTCATGTATCTCATTATATGAAGAAGTGCTGAAACAACAGCTAATTTGCAATAATTATGTTGCAGGGGAATCATATGCATCAAGAAAATGTGGAACTCTACAAGAAATTAGATATGATTCGTAAGGAAAATGCAGAACTGCAAATGAAGGTAGAGATCCAAAACTTATGTTGAAATGCTTCATTTTTTACTTTATTTATTTTTGGGTAAAAAACCAAACTTTCATTTAAAAAAAAATTAAAGAGTATACAATGGCATACAAAGGAAACAAGTCCACCCACATTAAAAAATAATAATAATAAAAAAAAAAGGTCCAATCCCTAACTAAATTGTCCTCCTAGGATCTCTCGACTTCCGTATTCTGCTATTTCTCTCTAGTAAAATCCCCCACAACATTGAAAAGAAACAAGATTACCACATAACTTTTATTTTATCCCAAAATGGGGGATTCAAGTCCCCTCCTCAATCATGACTGCGTTTTTTGTGTACCAGGCCTAT 1404 34.47 MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSSSIRSITDRYNKMKEEQNQLMNSVSELQFWKREAAALKQQLHYMQECHRHLMGEELSGLSVKDLQNLESQLEMSLKGVRVKKV 142
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 31391637 31404506 + XM_039049635.1 Bhi11g01063 49775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01063 142 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bhi11g01063 142 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Bhi11g01063 142 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bhi11g01063 142 CDD MADS_MEF2_like 2 76 IPR033896 GO:0000977|GO:0045944
Bhi11g01063 142 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bhi11g01063 142 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bhi11g01063 142 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bhi11g01063 142 SUPERFAMILY SRF-like 2 90 IPR036879 GO:0003677|GO:0046983
Bhi11g01063 142 Coils Coil 62 99 - -
Bhi11g01063 142 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bhi11g01063 142 ProSiteProfiles K-box domain profile. 86 142 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bhi11g01063 142 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 141 - -
Bhi11g01063 142 Pfam K-box region 84 141 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bhi11g01063 142 PANTHER - 1 141 - -
Bhi11g01063 142 Gene3D - 13 99 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g01061 Bhi-Chr11:31391637 Bhi11g01063 Bhi-Chr11:31391637 1.55E-100 dispersed
Bhi11g01063 Bhi-Chr11:31391637 Bhi06g00235 Bhi-Chr6:5559278 6.75E-49 dispersed
Bhi11g01062 Bhi-Chr11:31391637 Bhi11g01063 Bhi-Chr11:31391637 6.08E-101 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2358 PF01486 K-box 2.60E-19 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01063 K09264 - csv:101203098 270.781