Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi11g01063 | AATTAAAAAAAAAAAAAAAAAAGGTCTTAGAGAGAGAGAGAGAGAGAGATAGATGAACTTGAATTGGAAATCTCTCTCCAGAAAAGCCACAAGAGAAGAAGCAAATCCACAGACCCTTAAGCAGTAAAAAGCCTACCTTTTTTCTCTTTTTTCTTGTATAATTTCAACTGTTTATTATTGTTTTGGTCGTTTTTGGATCTCCAATTTGGTTTTTTGAGTACCCTTTTTGGGTATTATTTGGGGGAATTAAGGGTTTCATATATAAAAAGAAAAAAAGTTGGGTTTTATTTGGAGATTTGAGTGAAATTTAGGGGTGAAAAGAGGGAAGAAAAATGGGAAGAGGGAAGATAGTGATAAGAAGAATAGACAATTCAACAAGCAGGCAAGTAACTTTTTCAAAGAGAAGAAGTGGATTATTGAAAAAAGCTAGAGAGCTTTCAATTCTTTGTGATGCTGAAGTTGGATTGATCATTTTTTCAAGTACTGGCAAACTCTATGATTATTCCAGTTCCAGCATAAGGTCGATTACTGATCGCTACAACAAGATGAAAGAGGAGCAAAATCAGCTGATGAACTCTGTTTCAGAACTCCAGTTTTGGAAAAGAGAGGCAGCTGCTTTGAAGCAACAGCTGCATTACATGCAAGAATGTCACAGACACCTGATGGGTGAGGAACTATCTGGCCTGAGTGTCAAAGATCTACAAAATCTGGAAAGCCAGTTGGAAATGAGTTTGAAAGGTGTCCGTGTGAAGAAGGTATAAACTATGAAGAGACCTCAATAAAAACATACACCTGATAAAGCATATTGTATGCGGATGTTTATGTGTTCTTGTATTTTTCTTGCAGGAAAAGATTTTAAGTGATGAAATTACTGAACTAAGACAGAAGGTTTTCCCCACTGTAAATATTCATGTATCTCATTATATGAAGAAGTGCTGAAACAACAGCTAATTTGCAATAATTATGTTGCAGGGGAATCATATGCATCAAGAAAATGTGGAACTCTACAAGAAATTAGATATGATTCGTAAGGAAAATGCAGAACTGCAAATGAAGGTAGAGATCCAAAACTTATGTTGAAATGCTTCATTTTTTACTTTATTTATTTTTGGGTAAAAAACCAAACTTTCATTTAAAAAAAAATTAAAGAGTATACAATGGCATACAAAGGAAACAAGTCCACCCACATTAAAAAATAATAATAATAAAAAAAAAAGGTCCAATCCCTAACTAAATTGTCCTCCTAGGATCTCTCGACTTCCGTATTCTGCTATTTCTCTCTAGTAAAATCCCCCACAACATTGAAAAGAAACAAGATTACCACATAACTTTTATTTTATCCCAAAATGGGGGATTCAAGTCCCCTCCTCAATCATGACTGCGTTTTTTGTGTACCAGGCCTAT | 1404 | 34.47 | MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSSSIRSITDRYNKMKEEQNQLMNSVSELQFWKREAAALKQQLHYMQECHRHLMGEELSGLSVKDLQNLESQLEMSLKGVRVKKV | 142 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 31391637 | 31404506 | + | XM_039049635.1 | Bhi11g01063 | 49775 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi11g01063 | 142 | Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) | 10 | 57 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi11g01063 | 142 | ProSitePatterns | MADS-box domain signature. | 3 | 57 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi11g01063 | 142 | ProSiteProfiles | MADS-box domain profile. | 1 | 61 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi11g01063 | 142 | CDD | MADS_MEF2_like | 2 | 76 | IPR033896 | GO:0000977|GO:0045944 | |
Bhi11g01063 | 142 | PRINTS | MADS domain signature | 3 | 23 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi11g01063 | 142 | PRINTS | MADS domain signature | 23 | 38 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi11g01063 | 142 | PRINTS | MADS domain signature | 38 | 59 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi11g01063 | 142 | SUPERFAMILY | SRF-like | 2 | 90 | IPR036879 | GO:0003677|GO:0046983 | |
Bhi11g01063 | 142 | Coils | Coil | 62 | 99 | - | - | |
Bhi11g01063 | 142 | SMART | madsneu2 | 1 | 60 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi11g01063 | 142 | ProSiteProfiles | K-box domain profile. | 86 | 142 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Bhi11g01063 | 142 | PANTHER | SERUM RESPONSE FACTOR HOMOLOG | 1 | 141 | - | - | |
Bhi11g01063 | 142 | Pfam | K-box region | 84 | 141 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Bhi11g01063 | 142 | PANTHER | - | 1 | 141 | - | - | |
Bhi11g01063 | 142 | Gene3D | - | 13 | 99 | IPR036879 | GO:0003677|GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi11g01061 | Bhi-Chr11:31391637 | Bhi11g01063 | Bhi-Chr11:31391637 | 1.55E-100 | dispersed | |
Bhi11g01063 | Bhi-Chr11:31391637 | Bhi06g00235 | Bhi-Chr6:5559278 | 6.75E-49 | dispersed | |
Bhi11g01062 | Bhi-Chr11:31391637 | Bhi11g01063 | Bhi-Chr11:31391637 | 6.08E-101 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
2358 | PF01486 | K-box | 2.60E-19 | No_clan | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi11g01063 | K09264 | - | csv:101203098 | 270.781 |