Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi11g01095 | ATGAGAAAAAGTAGAGAAAGACAAAAGGTGGAGATGGTGAAGATGCCAAATGAGAGCAACCTTCAAGTCACCTTCTCGAAGCGCCGGTCTGGCCTCTTTAAGAAAGCTAGTGAGCTCTGCACGCTGTGCGGCGCTGAGATTGCCATTATCGTCTTTTCGCCTGGGAAGAAAGTATTCTCTTTTGGCCACCCTTGTGTTGAAGCCCTCATCGAGAGATTTGTGACTCGAAATCCTCCACCGAGCTTTGGTACGCTACAACTAATTGAAGCTCACCGAAATGTCAATGTTCGAGAATTGAATGCACAACTTACTCAAGTGTTGAACCGAGTAGAAATGGAGAAGAAGCACGGTGAAGAGTTGAACAAACTGCGAAAGGCAAATCAGGTATTATTTTGGTGGGAGCTTCCCATAGGAGAAATGGAAATGAATCAATTAGAACAACTCAAAGCATCCTTGAATGAGTTAAAGAAGAATGTCACACAACAAGCTGATCAGATTTTGATTCAGACTTCTAATGACAATCTGCCGCCGCAGTTCTTCCCAACTCCAACTCCGACACCGACACCCATAAATTCTAACTAA | 582 | 43.99 | MRKSRERQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSFGHPCVEALIERFVTRNPPPSFGTLQLIEAHRNVNVRELNAQLTQVLNRVEMEKKHGEELNKLRKANQVLFWWELPIGEMEMNQLEQLKASLNELKKNVTQQADQILIQTSNDNLPPQFFPTPTPTPTPINSN | 193 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 32317641 | 32321367 | + | XM_039048387.1 | Bhi11g01095 | 49807 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi11g01095 | 193 | MobiDBLite | consensus disorder prediction | 172 | 193 | - | - | |
Bhi11g01095 | 193 | PANTHER | AGAMOUS-LIKE MADS-BOX PROTEIN AGL62 | 5 | 177 | - | - | |
Bhi11g01095 | 193 | MobiDBLite | consensus disorder prediction | 178 | 193 | - | - | |
Bhi11g01095 | 193 | Gene3D | - | 83 | 176 | - | - | |
Bhi11g01095 | 193 | PANTHER | MADS BOX PROTEIN | 5 | 177 | - | - | |
Bhi11g01095 | 193 | Coils | Coil | 138 | 165 | - | - | |
Bhi11g01095 | 193 | PRINTS | MADS domain signature | 7 | 27 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi11g01095 | 193 | PRINTS | MADS domain signature | 27 | 42 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi11g01095 | 193 | PRINTS | MADS domain signature | 42 | 63 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi11g01095 | 193 | Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) | 16 | 61 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi11g01095 | 193 | SMART | madsneu2 | 5 | 64 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi11g01095 | 193 | SUPERFAMILY | SRF-like | 6 | 78 | IPR036879 | GO:0003677|GO:0046983 | |
Bhi11g01095 | 193 | Gene3D | - | 17 | 81 | IPR036879 | GO:0003677|GO:0046983 | |
Bhi11g01095 | 193 | ProSiteProfiles | MADS-box domain profile. | 5 | 65 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi11g01095 | 193 | CDD | MADS_MEF2_like | 7 | 73 | IPR033896 | GO:0000977|GO:0045944 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi08g02086 | Bhi-Chr8:60328866 | Bhi11g01095 | Bhi-Chr11:32317641 | 8.71E-35 | dispersed | |
Bhi11g01095 | Bhi-Chr11:32317641 | Bhi12g01461 | Bhi-Chr12:47324506 | 9.40E-34 | dispersed | |
Bhi11g01095 | Bhi-Chr11:32317641 | Bhi03g00058 | Bhi-Chr3:1432325 | 4.02E-38 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
2359 | PF00319 | SRF-TF | 2.80E-24 | No_clan | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi11g01095 | - | - | bhj:120090669 | 348.591 |