Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01095 ATGAGAAAAAGTAGAGAAAGACAAAAGGTGGAGATGGTGAAGATGCCAAATGAGAGCAACCTTCAAGTCACCTTCTCGAAGCGCCGGTCTGGCCTCTTTAAGAAAGCTAGTGAGCTCTGCACGCTGTGCGGCGCTGAGATTGCCATTATCGTCTTTTCGCCTGGGAAGAAAGTATTCTCTTTTGGCCACCCTTGTGTTGAAGCCCTCATCGAGAGATTTGTGACTCGAAATCCTCCACCGAGCTTTGGTACGCTACAACTAATTGAAGCTCACCGAAATGTCAATGTTCGAGAATTGAATGCACAACTTACTCAAGTGTTGAACCGAGTAGAAATGGAGAAGAAGCACGGTGAAGAGTTGAACAAACTGCGAAAGGCAAATCAGGTATTATTTTGGTGGGAGCTTCCCATAGGAGAAATGGAAATGAATCAATTAGAACAACTCAAAGCATCCTTGAATGAGTTAAAGAAGAATGTCACACAACAAGCTGATCAGATTTTGATTCAGACTTCTAATGACAATCTGCCGCCGCAGTTCTTCCCAACTCCAACTCCGACACCGACACCCATAAATTCTAACTAA 582 43.99 MRKSRERQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSFGHPCVEALIERFVTRNPPPSFGTLQLIEAHRNVNVRELNAQLTQVLNRVEMEKKHGEELNKLRKANQVLFWWELPIGEMEMNQLEQLKASLNELKKNVTQQADQILIQTSNDNLPPQFFPTPTPTPTPINSN 193
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 32317641 32321367 + XM_039048387.1 Bhi11g01095 49807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01095 193 MobiDBLite consensus disorder prediction 172 193 - -
Bhi11g01095 193 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL62 5 177 - -
Bhi11g01095 193 MobiDBLite consensus disorder prediction 178 193 - -
Bhi11g01095 193 Gene3D - 83 176 - -
Bhi11g01095 193 PANTHER MADS BOX PROTEIN 5 177 - -
Bhi11g01095 193 Coils Coil 138 165 - -
Bhi11g01095 193 PRINTS MADS domain signature 7 27 IPR002100 GO:0003677|GO:0046983
Bhi11g01095 193 PRINTS MADS domain signature 27 42 IPR002100 GO:0003677|GO:0046983
Bhi11g01095 193 PRINTS MADS domain signature 42 63 IPR002100 GO:0003677|GO:0046983
Bhi11g01095 193 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 16 61 IPR002100 GO:0003677|GO:0046983
Bhi11g01095 193 SMART madsneu2 5 64 IPR002100 GO:0003677|GO:0046983
Bhi11g01095 193 SUPERFAMILY SRF-like 6 78 IPR036879 GO:0003677|GO:0046983
Bhi11g01095 193 Gene3D - 17 81 IPR036879 GO:0003677|GO:0046983
Bhi11g01095 193 ProSiteProfiles MADS-box domain profile. 5 65 IPR002100 GO:0003677|GO:0046983
Bhi11g01095 193 CDD MADS_MEF2_like 7 73 IPR033896 GO:0000977|GO:0045944
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g02086 Bhi-Chr8:60328866 Bhi11g01095 Bhi-Chr11:32317641 8.71E-35 dispersed
Bhi11g01095 Bhi-Chr11:32317641 Bhi12g01461 Bhi-Chr12:47324506 9.40E-34 dispersed
Bhi11g01095 Bhi-Chr11:32317641 Bhi03g00058 Bhi-Chr3:1432325 4.02E-38 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2359 PF00319 SRF-TF 2.80E-24 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01095 - - bhj:120090669 348.591