Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01126 GAAGACCAAGACAACGATTCCGGCTGGCAGCTGAATCCGTGCCTGATAAAATTGGTTTTCCTGGAAAAATATTAAGGAGCCTCAGGAAAAATATATAAATGTATAAATCTCAACGAGCGATAGAGAGAATCAGTATTCAGAGAGGGCGAATTTTTCCACCTATGCTTCAATTTTCAACGGAATTTTGAATGTTCCAGCCTCCAAAAACCTAACTCATTCCACTATTCCCTTTGCATAACTGAGAAAAAAACTAGTTGGCCGTGGGAGTGAGCCTTCTTTCTGCTGCCTTTAATGGGTGCTCCGAAGCAGAAATGGACTAGTGAAGAAGAAGCAGCCCTGAAGGCTGGAGTTGTTAAGCATGGAGCAGGAAAGTGGCGAACGATACTTAAGGATCCTGAATTCAGCAGTGTACTGTATCTTCGTTCAAATGTTGATCTCAAGGACAAATGGAGGAATATGAGTGTCATGGCCAATGGCTGGGGATCCCGAGAGAAGGCCAGGTTGGCTCTTAAGAGATTACATGCTCCTAAAAAGGATGAGAACACTGTGGCTCAAAGTGTTGCTGTCCAAAGTGAAGACGAATTGCCAGAAGCTAAGTCTGTTTCTCTTTCCTTGGATATCAAGCAGATAACTGGTCCAAAGCGATCTAATGTAAGAAAGGAAGAGGAGGAGGAAGAAGAAGAAGAAGAAAAAGAAGTAGAAAGAATAGAAAGAGATGCAAGATATGATTGTCATAGGTTAGACAATCTTATAATTGAGGCGATTACTTCCCTCAGGGAGCCTGGTGGTTCTAATAAGACAAAGATTACCTCATATATAGAGGATCAATACTGGGCACCTCCCGACTTCAAGAGGTTGTTATCATCAAAATTGAAGTTCTTAACAGCTAGTCGTAAACTGGTCAAGGTTAAACGAAAATATAGGCTTCCTCCAGCGGGGCCTTCAGAGAGGAGGAGCTCTATGTTATTGTTGGACGACCAGCAAAGAGCTTCTACAAGAGCTGACAAGGATGAAATGTGTATTCTTTCGAAAGCTCAGATCGATCTCGAATTAGCCAAGATGAGGACCATGACTTCCCAAGAGGCAGCGGCAGCTGCTGCTCGAGCAGTTGCAGAAGCAGAAGTAGCAATAGCGGAAGCCGAAGAGGCAGCAAGGGAAGCCGAGGCAGCTGAGGCTGATGCAGAAGCAGCCCAATCATTTGCAGAAGCTGCAATGAAGACACTGAAAGGAAGAAATCTCCCGAAGATGATGATTCGGGTTTGATGGAAAGCAAAAACTGATTTAGAAGAGTTATGGAGCTGTTCTTAAATGGATCAACGTGTTCCACGCTCACTATCGATTAGCATTATAAGCAACCTCTCCCCCACCATCTTCAATTGGTTTTTGGGCAACTCGAGGAACAGGGTCATATCTGACTAGAAGAAGAATAGGAAAATTCTGTGGGTTTATAGTTAGTTGTATGTAAAAATGTTCATTGCTTGTAGTGTAGGAAATATGTGGGCATTTTATCTATGCTCTCTGATGTTAATGAATTATTGCCATTGTTTATTTCTATTAGTCTGAAACTTTGGAGTTGTATTAATGTAAACAAGGAAAAAAGATAGAGAAATAGATGGGGTTTTGACAAAAAAAAAAAAAAAAAAGACCAAAGTTTCAAGGGGGGTCCCAATTTCATTTTAATTTCACGTTTTGGCAACCACAAA 1703 41.63 MGAPKQKWTSEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLKDKWRNMSVMANGWGSREKARLALKRLHAPKKDENTVAQSVAVQSEDELPEAKSVSLSLDIKQITGPKRSNVRKEEEEEEEEEEKEVERIERDARYDCHRLDNLIIEAITSLREPGGSNKTKITSYIEDQYWAPPDFKRLLSSKLKFLTASRKLVKVKRKYRLPPAGPSERRSSMLLLDDQQRASTRADKDEMCILSKAQIDLELAKMRTMTSQEAAAAAARAVAEAEVAIAEAEEAAREAEAAEADAEAAQSFAEAAMKTLKGRNLPKMMIRV 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 32919601 32927793 + XM_039049922.1 Bhi11g01126 49838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01126 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 33 IPR017930 -
Bhi11g01126 323 MobiDBLite consensus disorder prediction 116 137 - -
Bhi11g01126 323 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 146 214 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bhi11g01126 323 Pfam Myb-like DNA-binding domain 5 55 IPR001005 -
Bhi11g01126 323 PANTHER TELOMERE REPEAT-BINDING FACTOR 1 1 320 - -
Bhi11g01126 323 Coils Coil 266 303 - -
Bhi11g01126 323 SUPERFAMILY Homeodomain-like 2 70 IPR009057 -
Bhi11g01126 323 Coils Coil 118 142 - -
Bhi11g01126 323 Gene3D - 2 59 - -
Bhi11g01126 323 PANTHER SINGLE MYB HISTONE 4 1 320 IPR044597 GO:0003691
Bhi11g01126 323 SUPERFAMILY Winged helix DNA-binding domain 146 220 IPR036390 -
Bhi11g01126 323 Pfam linker histone H1 and H5 family 151 208 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bhi11g01126 323 Gene3D - 146 222 IPR036388 -
Bhi11g01126 323 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Bhi11g01126 323 SMART sant 4 59 IPR001005 -
Bhi11g01126 323 SMART h15plus2 143 209 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bhi11g01126 323 CDD SANT_TRF 6 56 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g01126 Bhi-Chr11:32919601 Bhi11g01128 Bhi-Chr11:32920314 0 dispersed
Bhi11g01125 Bhi-Chr11:32919601 Bhi11g01126 Bhi-Chr11:32919601 0 tandem
Bhi11g01126 Bhi-Chr11:32919601 Bhi11g01127 Bhi-Chr11:32919601 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2361 PF00538 Linker_histone 1.10E-07 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01126 K09422 - csv:101218411 477.633