Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01127 GAAGACCAAGACAACGATTCCGGCTGGCAGCTGAATCCGTGCCTGATAAAATTGGTTTTCCTGGAAAAATATTAAGGAGCCTCAGGAAAAATATATAAATGTATAAATCTCAACGAGCGATAGAGAGAATCAGTATTCAGAGAGGGCGAATTTTTCCACCTATGCTTCAATTTTCAACGGAATTTTGAATGTTCCAGCCTCCAAAAACCTAACTCATTCCACTATTCCCTTTGCATAACTGAGAAAAAAACTAGTTGGCCGTGGGAGTGAGCCTTCTTTCTGCTGCCTTTAATGGGTGCTCCGAAGCAGAAATGGACTAGTGAAGAAGAAGCAGCCCTGAAGGCTGGAGTTGTTAAGCATGGAGCAGGAAAGTGGCGAACGATACTTAAGGATCCTGAATTCAGCAGTGTACTGTATCTTCGTTCAAATGTTGATCTCAAGGACAAATGGAGGAATATGAGTGTCATGGCCAATGGCTGGGGATCCCGAGAGAAGGCCAGGTTGGCTCTTAAGAGATTACATGCTCCTAAAAAGGATGAGAACACTGTGGCTCAAAGTGTTGCTGTCCAAAGTGAAGACGAATTGCCAGAAGCTAAGTCTGTTTCTCTTTCCTTGGATATCAAGCAGATAACTGGTCCAAAGCGATCTAATGTAAGGTTAGACAATCTTATAATTGAGGCGATTACTTCCCTCAGGGAGCCTGGTGGTTCTAATAAGACAAAGATTACCTCATATATAGAGGATCAATACTGGGCACCTCCCGACTTCAAGAGGTTGTTATCATCAAAATTGAAGTTCTTAACAGCTAGTCGTAAACTGGTCAAGGTTAAACGAAAATATAGGCTTCCTCCAGCGGGGCCTTCAGAGAGGAGGAGCTCTATGTTATTGTTGGACGACCAGCAAAGAGCTTCTACAAGAGCTGACAAGGATGAAATGTGTATTCTTTCGAAAGCTCAGATCGATCTCGAATTAGCCAAGATGAGGACCATGACTTCCCAAGAGGCAGCGGCAGCTGCTGCTCGAGCAGTTGCAGAAGCAGAAGTAGCAATAGCGGAAGCCGAAGAGGCAGCAAGGGAAGCCGAGGCAGCTGAGGCTGATGCAGAAGCAGCCCAATCATTTGCAGAAGCTGCAATGAAGACACTGAAAGGAAGAAATCTCCCGAAGATGATGATTCGGGTTTGATGGAAAGCAAAAACTGATTTAGAAGAGTTATGGAGCTGTTCTTAAATGGATCAACGTGTTCCACGCTCACTATCGATTAGCATTATAAGCAACCTCTCCCCCACCATCTTCAATTGGTTTTTGGGCAACTCGAGGAACAGGGTCATATCTGACTAGAAGAAGAATAGGAAAATTCTGTGGGTTTATAGTTAGTTGTATGTAAAAATGTTCATTGCTTGTAGTGTAGGAAATATGTGGGCATTTTATCTATGCTCTCTGATGTTAATGAATTATTGCCATTGTTTATTTCTATTAGTCTGAAACTTTGGAGTTGTATTAATGTAAACAAGGAAAAAAGATAGAGAAATAGATGGGGTTTTGACAAAAAAAAAAAAAAAAAAGACCAAAGTTTCAAGGGGGGTCCCAATTTCATTTTAATTTCACGTTTTGGCAACCACAAA 1622 41.99 MGAPKQKWTSEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLKDKWRNMSVMANGWGSREKARLALKRLHAPKKDENTVAQSVAVQSEDELPEAKSVSLSLDIKQITGPKRSNVRLDNLIIEAITSLREPGGSNKTKITSYIEDQYWAPPDFKRLLSSKLKFLTASRKLVKVKRKYRLPPAGPSERRSSMLLLDDQQRASTRADKDEMCILSKAQIDLELAKMRTMTSQEAAAAAARAVAEAEVAIAEAEEAAREAEAAEADAEAAQSFAEAAMKTLKGRNLPKMMIRV 296
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 32919601 32927793 + XM_039049923.1 Bhi11g01127 49839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01127 296 PANTHER TELOMERE REPEAT-BINDING FACTOR 1 1 293 - -
Bhi11g01127 296 SUPERFAMILY Winged helix DNA-binding domain 117 193 IPR036390 -
Bhi11g01127 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 33 IPR017930 -
Bhi11g01127 296 SMART h15plus2 117 182 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bhi11g01127 296 PANTHER SINGLE MYB HISTONE 4 1 293 IPR044597 GO:0003691
Bhi11g01127 296 Coils Coil 239 276 - -
Bhi11g01127 296 Pfam Myb-like DNA-binding domain 5 55 IPR001005 -
Bhi11g01127 296 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 119 187 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bhi11g01127 296 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Bhi11g01127 296 SMART sant 4 59 IPR001005 -
Bhi11g01127 296 Gene3D - 2 59 - -
Bhi11g01127 296 Pfam linker histone H1 and H5 family 124 181 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bhi11g01127 296 SUPERFAMILY Homeodomain-like 2 70 IPR009057 -
Bhi11g01127 296 CDD SANT_TRF 6 56 - -
Bhi11g01127 296 Gene3D - 116 195 IPR036388 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02738 Bhi-Chr1:67414937 Bhi11g01127 Bhi-Chr11:32919601 2.44E-38 dispersed
Bhi03g01051 Bhi-Chr3:20905829 Bhi11g01127 Bhi-Chr11:32919601 1.72E-91 dispersed
Bhi03g01052 Bhi-Chr3:20905829 Bhi11g01127 Bhi-Chr11:32919601 1.57E-91 dispersed
Bhi11g01126 Bhi-Chr11:32919601 Bhi11g01127 Bhi-Chr11:32919601 0 tandem
Bhi11g01127 Bhi-Chr11:32919601 Bhi11g01128 Bhi-Chr11:32920314 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2362 PF00538 Linker_histone 9.80E-08 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01127 K09422 - csv:101218411 437.187