Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01128 TATACTTCCTTCTGCTTTGGCTTAAACGGAGATAGATTTCTTATCATCTAAGAAGTTCTCTTTTTAGTTCAACTACTTTTCCGGGTGGGGATTTGAACCTGACCCTTTTGGTGGAGAAAAAAACTAGTTGGCCGTGGGAGTGAGCCTTCTTTCTGCTGCCTTTAATGGGTGCTCCGAAGCAGAAATGGACTAGTGAAGAAGAAGCAGCCCTGAAGGCTGGAGTTGTTAAGCATGGAGCAGGAAAGTGGCGAACGATACTTAAGGATCCTGAATTCAGCAGTGTACTGTATCTTCGTTCAAATGTTGATCTCAAGGACAAATGGAGGAATATGAGTGTCATGGCCAATGGCTGGGGATCCCGAGAGAAGGCCAGGTTGGCTCTTAAGAGATTACATGCTCCTAAAAAGGATGAGAACACTGTGGCTCAAAGTGTTGCTGTCCAAAGTGAAGACGAATTGCCAGAAGCTAAGTCTGTTTCTCTTTCCTTGGATATCAAGCAGATAACTGGTCCAAAGCGATCTAATGTAAGAAAGGAAGAGGAGGAGGAAGAAGAAGAAGAAGAAAAAGAAGTAGAAAGAATAGAAAGAGATGCAAGATATGATTGTCATAGGTGGGAAAAAAGGTTAGACAATCTTATAATTGAGGCGATTACTTCCCTCAGGGAGCCTGGTGGTTCTAATAAGACAAAGATTACCTCATATATAGAGGATCAATACTGGGCACCTCCCGACTTCAAGAGGTTGTTATCATCAAAATTGAAGTTCTTAACAGCTAGTCGTAAACTGGTCAAGGTTAAACGAAAATATAGGCTTCCTCCAGCGGGGCCTTCAGAGAGGAGGAGCTCTATGTTATTGTTGGACGACCAGCAAAGAGCTTCTACAAGAGCTGACAAGGATGAAATGTGTATTCTTTCGAAAGCTCAGATCGATCTCGAATTAGCCAAGATGAGGACCATGACTTCCCAAGAGGCAGCGGCAGCTGCTGCTCGAGCAGTTGCAGAAGCAGAAGTAGCAATAGCGGAAGCCGAAGAGGCAGCAAGGGAAGCCGAGGCAGCTGAGGCTGATGCAGAAGCAGCCCAATCATTTGCAGAAGCTGCAATGAAGACACTGAAAGGAAGAAATCTCCCGAAGATGATGATTCGGGTTTGATGGAAAGCAAAAACTGATTTAGAAGAGTTATGGAGCTGTTCTTAAATGGATCAACGTGTTCCACGCTCACTATCGATTAGCATTATAAGCAACCTCTCCCCCACCATCTTCAATTGGTTTTTGGGCAACTCGAGGAACAGGGTCATATCTGACTAGAAGAAGAATAGGAAAATTCTGTGGGTTTATAGTTAGTTGTATGTAAAAATGTTCATTGCTTGTAGTGTAGGAAATATGTGGGCATTTTATCTATGCTCTCTGATGTTAATGAATTATTGCCATTGTTTATTTCTATTAGTCTGAAACTTTGGAGTTGTATTAATGTAAACAAGGAAAAAAGATAGAGAAATAGATGGGGTTTTGACAAAAAAAAAAAAAAAAAAGACCAAAGTTTCAAGGGGGGTCCCAATTTCATTTTAATTTCACGTTTTGGCAACCACAAA 1588 41.81 MGAPKQKWTSEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLKDKWRNMSVMANGWGSREKARLALKRLHAPKKDENTVAQSVAVQSEDELPEAKSVSLSLDIKQITGPKRSNVRKEEEEEEEEEEKEVERIERDARYDCHRWEKRLDNLIIEAITSLREPGGSNKTKITSYIEDQYWAPPDFKRLLSSKLKFLTASRKLVKVKRKYRLPPAGPSERRSSMLLLDDQQRASTRADKDEMCILSKAQIDLELAKMRTMTSQEAAAAAARAVAEAEVAIAEAEEAAREAEAAEADAEAAQSFAEAAMKTLKGRNLPKMMIRV 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 32920314 32927793 + XM_039049921.1 Bhi11g01128 49840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01128 327 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 146 218 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bhi11g01128 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 33 IPR017930 -
Bhi11g01128 327 Gene3D - 2 59 - -
Bhi11g01128 327 PANTHER SINGLE MYB HISTONE 4 1 324 IPR044597 GO:0003691
Bhi11g01128 327 Pfam linker histone H1 and H5 family 154 212 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bhi11g01128 327 Coils Coil 270 307 - -
Bhi11g01128 327 Pfam Myb-like DNA-binding domain 5 55 IPR001005 -
Bhi11g01128 327 PANTHER TELOMERE REPEAT-BINDING FACTOR 1 1 324 - -
Bhi11g01128 327 SUPERFAMILY Homeodomain-like 2 70 IPR009057 -
Bhi11g01128 327 Coils Coil 118 142 - -
Bhi11g01128 327 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Bhi11g01128 327 SMART sant 4 59 IPR001005 -
Bhi11g01128 327 SMART h15plus2 148 213 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bhi11g01128 327 Gene3D - 151 226 IPR036388 -
Bhi11g01128 327 SUPERFAMILY Winged helix DNA-binding domain 153 224 IPR036390 -
Bhi11g01128 327 CDD SANT_TRF 6 56 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g01125 Bhi-Chr11:32919601 Bhi11g01128 Bhi-Chr11:32920314 0 dispersed
Bhi11g01126 Bhi-Chr11:32919601 Bhi11g01128 Bhi-Chr11:32920314 0 dispersed
Bhi11g01127 Bhi-Chr11:32919601 Bhi11g01128 Bhi-Chr11:32920314 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2363 PF00538 Linker_histone 8.40E-08 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01128 K09422 - csv:101218411 493.426