Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01130 TTGTTCATTACAGTGACCAAAAACAAACATTTGCTTCTCAAAGCCAACTTTGTTCTTCAGTTATTTTCTTCTCAAGATTTCTTTGGGTTATTTATTTATTTATTTATTTGTTCATCTCTTTGATTTCTGTGATTTCTGAAAGATATGAACATTTTCAAAGCTTTCAGACTCTTTTTGTTTCCTTTAATTTTGCTATTTTCAGGGAAATCCATTATTACCATCCAAGGTTTCTCCTATGATTATTCTGCCACAACTGAGTGTTTGGCAAAGCCAAGGAGGGTTCATAATGGGGGAGGGATCATAGTGAATCCAAAGTTCAACAATGGAATTGAAGGGTGGAAAGTGTTTGGAGAAGGAGAAATAAAGCAAGGGTGGTTGAAACAAGGGAATTACATCAATACCTTCATTATAGCTCATAAGAGGACTCACCCAAGGGATAGTTTCCATCAATTGGTTCACCTCCAACATGGAAACCTCTATAGTTTCTCCGCTTGGGTTCGATTAAGCGAGGGAAATGCACATGTGGCTGTTTTATTCAGAAATAGTAAAGGGGGTCAGATTCTTCATGGTGGTGAAACCATGGCCAAGCATGGGTGCTGGAGTTTGCTCAAAGGTGGCATTGTCTCTAATTTTACAGGCCAAGCTGAGCTTATTTTTGAGAGTACAAATACAGCAGTGGAAATCTGGGTTGATAATGTCTCACTACAGCCATTTACAAAGGAGCAATGGCGATCCCACCAAGAAAAAAGCATTAACAAGGTGAGGAAAAGCAAGGTGAGGCTGCAAATAACTCAAGCAGACAACAGTAAACTAGCAGGTGCAAAAGTCTTCATTGACCAGAAAAAACCAAACTTCCCATTTGGGGCAGGAATGAACTACCACATTCTCCTCAGCAAAGAATACCAACAGTGGTTTGCATCAAGATTTTCCTATGCCACTTTCACCAATGAACTTAAGTGGTATAGCACTGAGAAAGTAGAAGGCCAAGAGAACTACACCATCCCCGATGCAATGCTTGAGTTTTCCCAACAACACGGTATTTCAGTAAGAGGACACAACATTTTCTGGGACAATCCCAAATTCCAGCCACAATGGGTCAAGTCACTCTCCCCTAAAGATTTGAAGGTAGCAGCCGACAGAAGAATCAACTCCGTGGTTAAGAGATATTCTGGAAAGTTTATCCATTGGGACGTCGTGAATGAAAACGTGCACTTCAGATTCTTTGAGGACAAACTCGGTGAAAATGCCTCTGCAGAGTACTTCAACATAGCACATAAACTTGACAATAACACACTTCTTTTCATGAATGAATACAATACCATGGAACACGATTACGAAAAGACATCAACCCCAGCTAACTTCAGAAAGAAACTCCTCGAAATCCTGTCGTATCCCGGGAACGAAAACATCCTAGCAGGAATCGGCTTGCAGGGCAACTTCGGCCCTGCTGCACCCAACCTGCCATACATGAGATCCGCTTTGGACCTTCTAGGATCAACAGGCTACCCCATATGGATCACAGAGGTGTTTGTTCACAAAACTCCAAATCAGGCACAATACTATGAGGAAGTTCTAAGAGAAGGATACTCACATCCTGCAGTGAAGGGGATAATCACATTTGCAGGCCCAGAATCAGCTGGTTTCACTACTCTGCCGCTTGTGGATATGAATTTCAAGAACACCCCAGCAGGAGATGTTGTCGATAAACTTTTGGCTGAATGGAAATCTCCCATCTTTGAAATTACAGCCGATGATGAAGGTTTTGTTGATGCTTCGTTGTTCCATGGAGATTACAATGTCACAGTGCAACACCCTCGAACCAATTCCTCCATTTCTGTTAGTATTAGAGTGACTGAAGAGGCCGCTCATCGGACCTTGAATGTCCAACTCCGGGATAATTGACCAAATCCCATTTATAATTAAATAATAAATAACACATTGATGTTTCTTTT 1952 41.29 MNIFKAFRLFLFPLILLFSGKSIITIQGFSYDYSATTECLAKPRRVHNGGGIIVNPKFNNGIEGWKVFGEGEIKQGWLKQGNYINTFIIAHKRTHPRDSFHQLVHLQHGNLYSFSAWVRLSEGNAHVAVLFRNSKGGQILHGGETMAKHGCWSLLKGGIVSNFTGQAELIFESTNTAVEIWVDNVSLQPFTKEQWRSHQEKSINKVRKSKVRLQITQADNSKLAGAKVFIDQKKPNFPFGAGMNYHILLSKEYQQWFASRFSYATFTNELKWYSTEKVEGQENYTIPDAMLEFSQQHGISVRGHNIFWDNPKFQPQWVKSLSPKDLKVAADRRINSVVKRYSGKFIHWDVVNENVHFRFFEDKLGENASAEYFNIAHKLDNNTLLFMNEYNTMEHDYEKTSTPANFRKKLLEILSYPGNENILAGIGLQGNFGPAAPNLPYMRSALDLLGSTGYPIWITEVFVHKTPNQAQYYEEVLREGYSHPAVKGIITFAGPESAGFTTLPLVDMNFKNTPAGDVVDKLLAEWKSPIFEITADDEGFVDASLFHGDYNVTVQHPRTNSSISVSIRVTEEAAHRTLNVQLRDN 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 32993882 32998752 - XM_039047352.1 Bhi11g01130 49842

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01130 585 SMART glyco_10 270 523 IPR001000 GO:0004553|GO:0005975
Bhi11g01130 585 SUPERFAMILY (Trans)glycosidases 223 527 IPR017853 -
Bhi11g01130 585 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 224 522 IPR001000 GO:0004553|GO:0005975
Bhi11g01130 585 Pfam Glycosyl hydrolase family 10 234 489 IPR001000 GO:0004553|GO:0005975
Bhi11g01130 585 Gene3D Glycosidases 227 530 - -
Bhi11g01130 585 Gene3D - 42 190 - -
Bhi11g01130 585 SUPERFAMILY Galactose-binding domain-like 50 189 IPR008979 -
Bhi11g01130 585 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS, PUTATIVE-RELATED 37 581 - -
Bhi11g01130 585 PANTHER GLYCOSYL HYDROLASE 37 581 IPR044846 GO:0004553|GO:0005975
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01130 - - - csv:101222433 996.112
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01050 Bhi-Chr5:37502625 Bhi11g01130 Bhi-Chr11:32993882 0 dispersed
Bhi10g01867 Bhi-Chr10:46567320 Bhi11g01130 Bhi-Chr11:32993882 1.61E-122 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g710 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone3ag1030 Cone10ag1047 Lsi03g00578 . . . . . . . . . . . Sed07g1258 Cmo04g00478 . . . . . . Cpe01g00400 Bhi11g01130 Tan01g0624 Cmetu07g1354 . Hepe07g0408 Mch10g0421 . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002470 0 2 1 0 1 1 1 1 1 2 1 2 3 2 2 4 2 3 4 1 2 3 2 4 2 2 2 4 2 3 60
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi11g01130 Bhi_Chr11 FPKM 5.602211 5.352469 7.311037 8.217431 12.53857 12.491935 13.523683 5.099028 4.499403 4.313967