Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01138 ATGGAACCTATAGGAGCCATTTCAGAAAGAGAATGGATATCTCTTAGTGGAGCTTATACTGCTGAAGAATCTGATTTCATGGCTAATTTGCTCAACAATTATTGTCTTCCAAATGAGCTAAATTCAGATTTAAGCTTGGAAATTCCTTCTGCTTATTGGGCTTCTAATGAACCACCTCCATCTTTGACCATGGCAGCCATGGATGAACCTTCTTATTATTCTTCAGATGCTTCTGATTCTTCCAATGTGTATAATCTTCCACCAGCCAACAACAATAATCATCCTTACACTTTCACTGATTCTCACCCTCTTTGGTTGCCTAATAATGGTGCCTCTTTGTCCTTGGATTTCTCCATGGAGGATGTCGGGAATGCCGATTGCTTGGCCGACGACAATGGTTCGAATGTTCGAAAAACAAGGCAATGCAGGCTGCAACATTCCTCTGCTGACCCTGTTCTCAATGGGAAAAGCTCACAACCGAAACGAAGAGCCGAGGAGGCAACAATGGAAGAAACTATGAGGGATGATAAAGTTGTGCCGGTTTCGGTTGAGAACGTCTCGAGGAAGCGATCCCAAAGTTTGCTTGATGTTGAAAAGACGAAAAGGAGCGTGAGGGCGCGGAAGAGCTCGAAGATCGCTTCGGCTAGCTGCAATGAAGATGATCATCACATTGTTAGTCCAAATGGGCAATGCACAAGCAGCTTCAGCTCTGAGGATGACTGTAATGAACCTCAAGAAATCAATGGTGGAATCACTTCTAGCTCAACCTCAAATGGAAAGCCAAGAGCCAGTAGAGGCTCAGCCACAGACCCTCAAAGCCTCTATGCCAGGAAAAGAAGAGAAAGAATCAATGAAAGGTTGAGAATCTTACAAAGCCTTGTCCCGAACGGCACAAAGGTTGATATCAGTACAATGCTTGAAGAAGCCGTTCAATATGTGAAGTTTTTGCAACTTCAAATCAAGTTGTTGAGCTCTGATGAGTTATGGATGTATGCACCTATTGCTTACAATGGAATGGACATTGGACTTAACTTGAAATTGATGAAGCAAGACAATGCATCACAATAG 1068 43.07 MEPIGAISEREWISLSGAYTAEESDFMANLLNNYCLPNELNSDLSLEIPSAYWASNEPPPSLTMAAMDEPSYYSSDASDSSNVYNLPPANNNNHPYTFTDSHPLWLPNNGASLSLDFSMEDVGNADCLADDNGSNVRKTRQCRLQHSSADPVLNGKSSQPKRRAEEATMEETMRDDKVVPVSVENVSRKRSQSLLDVEKTKRSVRARKSSKIASASCNEDDHHIVSPNGQCTSSFSSEDDCNEPQEINGGITSSSTSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDELWMYAPIAYNGMDIGLNLKLMKQDNASQ 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 33718223 33719828 - XM_039047078.1 Bhi11g01138 49850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01138 355 CDD bHLH_AtIND_like 268 330 - -
Bhi11g01138 355 MobiDBLite consensus disorder prediction 159 183 - -
Bhi11g01138 355 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 267 316 IPR011598 GO:0046983
Bhi11g01138 355 MobiDBLite consensus disorder prediction 143 278 - -
Bhi11g01138 355 PANTHER TRANSCRIPTION FACTOR BHLH84-LIKE 4 352 - -
Bhi11g01138 355 SMART finulus 273 322 IPR011598 GO:0046983
Bhi11g01138 355 MobiDBLite consensus disorder prediction 221 271 - -
Bhi11g01138 355 Pfam Helix-loop-helix DNA-binding domain 277 317 IPR011598 GO:0046983
Bhi11g01138 355 Gene3D - 269 325 IPR036638 GO:0046983
Bhi11g01138 355 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 267 333 IPR036638 GO:0046983
Bhi11g01138 355 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 4 352 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02167 Bhi-Chr3:47069768 Bhi11g01138 Bhi-Chr11:33718223 1.02E-18 dispersed
Bhi05g01043 Bhi-Chr5:37142172 Bhi11g01138 Bhi-Chr11:33718223 8.70E-63 dispersed
Bhi09g03235 Bhi-Chr9:83139325 Bhi11g01138 Bhi-Chr11:33718223 4.38E-52 dispersed
Bhi11g01138 Bhi-Chr11:33718223 Bhi12g01258 Bhi-Chr12:37466784 2.59E-24 dispersed
Bhi11g01138 Bhi-Chr11:33718223 Bhi04g00411 Bhi-Chr4:10618267 7.60E-59 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2364 PF00010 HLH 7.50E-09 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01138 - - csv:101217468 523.472