Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01177 GAACATATTTAAGAAACAACATTTTCCCTTTGTCCCCTCTCTCACTGGACTTTGAATAATCTACACAGCTTTTAACTTGGCAATAGTTGAGCTTCTTCTTCAATAGCTACACAAACAGGATGGAGCTTGAAATAGTGAGTAAAGAAACCATCAAGCCTTTATCTTCAACCCCACCAGAACTCAAGAATCTCCCCCTCAGCCTTTTCGATCAACAAGCCCCGAACATGTATATACGCCTTCTCTATTTCTACAATAGCTATAATATCAGCTCCAGCCATGGCCGGCAGCTTCTGAAAGACAGCCTCTCAAAAGCCTTGACTTTTTACTACCCTTTTGCCGGCCGTCTCCAGGACGGAGGCAATTCCATCGACTGCAATGACATGGGTGCGATCGTCTCGGAGGCAAAGCTCAGGTGTCCCATGTCAGAATTTATGAACAACTTCAATATGGAATGTGAGGAGATTTTGAAGTTGACTTTTTTCGATGAAATCAATGATGGAAATGACCAAAGATTAAACCCTTTGTTGTGTGTTCAGTTGACTCAATTTGAATGTGGAGGAGAAGTTATGTATGTGTTGTGCTCTCACAAAATTGCGGATTTCGCATCGTTGACCAACTTCATGAAGGATTGGGCTTTCATTGCTCGTAGCTCCGGTGACGGTGATCCACCGACGCTTAGTAGTCCTCCTCAGTTCAATGGGGCAAGTTTTTTCCCGCTGGAATTGGACGGCGGCGGCGGGGAAGATTCGAGAACAGAGAGACATGATGAAAATGTTGTTAGCTCAAAGAGATTTGTGTTTGAGGGTTCAAAAATTGCAGCTCTTAAAAGTATGGTATGTGAGAAAGTAGAGAATCCAACTAGAGTTCAGCTTCTCACTGCCTTCATCTACAAAGCTGCCCTTTCAGCAAAAAATTCAGTTACAGGTGTGTTAATTTTGGTTTGTATCATCTTTAAACTATATCATAGCTATGTGCCGGCAACAACTCTGCTTCAGCTCATCAACTTACGAAACAGAGTGGATCCGCCATTGCCGGCGACATTATCTGGAAACATAATCTCATCCTTCATAGCATCATTGACGATGCCGGAGCAGCAGGAAATGGAGCTATGGGACTTAGTGGGTGACATGAAGAGAAACTTTGAAGAGTTCTGCAAAACGTTCCCAACAAATTACAGAGCTGAACAATGGGGTTTACTTTACAAATTACATGCCAAAGAATCACTGGAGAAGGTGAGAAATCCAGGGGATTGTACACTGTATACATGTTCTAGCTGGTGCAAATTTCCAGTGTATGATGTGGATTTTGGATGGGGGAAGCCTGTATGGATCACTGTACCGGAGTTTCCATGGAAGAATATGATTTTGTTGATGGATTCCAAAGATGGTGAGGGGATTGAAGCTATGGTGAGCTTGGAGAAGAAGGAAATGGAGGTGTTTCTGCAAAATCAAGAGCTTCTCTCATTTTGTGAACTCAAAACTCCAGCTCATATAATTTAACTTGCGTGAAAGTAGAAACCGAAATTAAGATACGAAAATAGTTAATTAAAAGTCTGTACTAGGGAATCGGATTCCACCAAGTATTATGGTCGATCATGGAACTCTAAGATGCATTGCTTGCTTGTTTTTATCCTTAGCTTGTTTGTCCAAAAGACCAAAGCACGACATCCTAAATCATTAAT 1681 41.88 MELEIVSKETIKPLSSTPPELKNLPLSLFDQQAPNMYIRLLYFYNSYNISSSHGRQLLKDSLSKALTFYYPFAGRLQDGGNSIDCNDMGAIVSEAKLRCPMSEFMNNFNMECEEILKLTFFDEINDGNDQRLNPLLCVQLTQFECGGEVMYVLCSHKIADFASLTNFMKDWAFIARSSGDGDPPTLSSPPQFNGASFFPLELDGGGGEDSRTERHDENVVSSKRFVFEGSKIAALKSMVCEKVENPTRVQLLTAFIYKAALSAKNSVTGVLILVCIIFKLYHSYVPATTLLQLINLRNRVDPPLPATLSGNIISSFIASLTMPEQQEMELWDLVGDMKRNFEEFCKTFPTNYRAEQWGLLYKLHAKESLEKVRNPGDCTLYTCSSWCKFPVYDVDFGWGKPVWITVPEFPWKNMILLMDSKDGEGIEAMVSLEKKEMEVFLQNQELLSFCELKTPAHII 459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 34330002 34333413 - XM_039049828.1 Bhi11g01177 49889

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01177 459 Pfam Transferase family 1 446 - -
Bhi11g01177 459 Gene3D - 218 449 IPR023213 -
Bhi11g01177 459 Gene3D - 1 202 IPR023213 -
Bhi11g01177 459 PANTHER F21J9.9 3 452 - -
Bhi11g01177 459 PANTHER N-BENZOYLTRANSFERASE, PUTATIVE-RELATED 3 452 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01177 - - - csv:101216762 620.928
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00582 Bhi-Chr4:13949610 Bhi11g01177 Bhi-Chr11:34330002 3.59E-103 dispersed
Bhi11g01177 Bhi-Chr11:34330002 Bhi12g02369 Bhi-Chr12:74907168 2.75E-72 dispersed
Bhi11g01176 Bhi-Chr11:34310428 Bhi11g01177 Bhi-Chr11:34330002 6.59E-85 tandem
Bhi11g01177 Bhi-Chr11:34330002 Bhi11g01178 Bhi-Chr11:34365186 6.32E-179 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g614 . Blo03g00087 . . . Bpe12g00298 . . Cmo19g00600 Cmo11g01389 . . . . . Cpe04g00301 Cpe15g00471 . . . . . . . Cla02g00630 Cam02g0664 Cec02g0668 Cco02g0692 Clacu02g0672 Cmu02g0666 Cre02g0985 . Cone8ag1111 Cone3ag0994 Cone10ag1015 Lsi03g00527 Csa07g00728 . Cme01g00080 . . Bda15g00844 . . . . Bma08g00506 . . . Cma11g01726 . Car11g01115 . . . Bhi11g01177 . . . . . . . . . . . . . . . Chy01g00086 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002214 0 3 0 0 0 3 3 3 3 1 2 2 4 1 2 4 2 0 3 3 3 1 4 6 0 3 5 2 0 0 63
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi11g01177 Bhi_Chr11 FPKM 20.520597 22.422493 26.787062 28.352234 29.676197 27.507381 31.220087 35.161224 32.279259 35.02272