Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01299 TAGCCTCTTACGTAATGCATTAACTTTTTTCCCTTTTCTTCCTCGTTTCGCTGTCGATCAAATCATTTATCAGCCCTAATCTGCGGTTTTGTCTCCATCTCCATCTCTTCCTCTCGCCGTCTGTTACTCATCGGGAATTATCCGGTTGGTCGAATCCTCAGTCGCGATCTCGGCAACTACGTCAACGGACATGGCGGCTGCAGCTACAACGAGCGTTGTGCCGCCGAATCGTCGGCGGACGGTTAACGCGCCGGAAGACAAGTTGGAATTCGAGACGACGGAGGGGGTTGAGCCGATCTTGACTTTCGATCAGATGGGCATTAAGGATGACCTTCTCCGTGGAATATATGCATACGGTTTTGAAAAGCCCTCGGCCATTCAGCAGAGAGCCGTGAGGCCGATTATTGAGGGTCGAGATGTTATTGCTCAGGCCCAATCTGGAACTGGCAAGACCTCCATGATTGCCCTTACCGTTTGCCAGATGGTTGATACCTCCAGCAGAGAGGTGCAGGCCTTGATCTTGTCCCCTACGAGAGAATTGGCAACTCAGACAGCGAAGGTTATATTGGCAATTGGCGACTACATTAATATACAAGCACACGCATGTATTGGAGGCAAAAGTGTTGGTGAAGATATCAGAAAGCTCGAGTTTGGAGTTCAGGTTGTGTCGGGAACTCCTGGAAGAGTCTGTGACATGATCAAGAGAAGGACATTGCGTACCAGAGCCATTAAGTTATTAGTTCTGGACGAGTCTGATGAAATGCTGAGCAGAGGGTTTAAAGACCAAATTTATGATGTATATCGATACCTCCCACCAGAACTTCAGGTTGTCTTGATTTCTGCTACCCTTCCACATGAAATCCTGGAGATGACGAACAAATTTATGACAGATCCTGTGAGGATTCTTGTCAAGCGTGATGAGTTGACTTTAGAGGGTATTAAGCAATTCTTCGTTGCGGTTGAAAGGGAAGAGTGGAAATTTGATACCTTGTGTGATCTTTATGACACCTTGACCATCACTCAAGCTGTAATTTTCTGTAACACTAAGCGGAAGGTTGAATGGTTGACTGAGAAGATGCGAAGTAATAACTTCACAGTTTCACATATGCATGGGGACATGCCTCAAAGGGAAAGAGATGCGATCATGGGGGAGTTTCGATCAGGAACTACCCGTGTCCTAATTACTACTGATGTTTGGGCACGAGGGCTTGATGTTCAGCAGGTATCACTAGTGATCAATTATGACCTTCCAAACAATCGAGAACTTTACATCCACAGGATAGGAAGGTCGGGTCGGTTTGGGCGCAAGGGTGTTGCTATTAACTTTGTGAAAAGTGATGACATCAAGATCCTGAGAGATATTGAGCAATACTACAGTACCCAGATTGATGAAATGCCCATGAACGTTGCTGATTTGATTTAAACACTGCTTGATGATGCCTACTGTTGTATGCTGTGTGGAAGATTTGTGTTAATATTTGATGCTCGCACTGGAGGTTGTCTTTATAAGTGCCTTTTTTTAATGGGTGATATGATGTAGCGTAGGAAGAGATTAACACAGCAACCTTTTTCTGAGTGGCTTGGATGTGTCCATAAATTGTATAATACTTGCGATTGTTTTTCCATTTTTTCAATGGGGAAGGGACTCGAGATTATATTTTTGATTGACTTGAAATACATTTTTCTGATATTAGTTGTGTTA 1702 44.24 MAAAATTSVVPPNRRRTVNAPEDKLEFETTEGVEPILTFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQMVDTSSREVQALILSPTRELATQTAKVILAIGDYINIQAHACIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNNFTVSHMHGDMPQRERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 410
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 38366572 38371533 + XM_039049099.1 Bhi11g01299 50011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01299 410 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 37 65 IPR014014 GO:0003724
Bhi11g01299 410 PANTHER BNAC03G41130D PROTEIN 21 403 - -
Bhi11g01299 410 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 393 IPR027417 -
Bhi11g01299 410 Pfam Helicase conserved C-terminal domain 263 371 IPR001650 -
Bhi11g01299 410 Gene3D - 27 245 IPR027417 -
Bhi11g01299 410 SMART helicmild6 290 371 IPR001650 -
Bhi11g01299 410 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 249 410 IPR001650 -
Bhi11g01299 410 Pfam DEAD/DEAH box helicase 62 224 IPR011545 GO:0003676|GO:0005524
Bhi11g01299 410 CDD SF2_C_DEAD 250 380 - -
Bhi11g01299 410 CDD DEADc_EIF4AIII_DDX48 39 239 - -
Bhi11g01299 410 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 68 238 IPR014001 -
Bhi11g01299 410 SMART ultradead3 56 253 IPR014001 -
Bhi11g01299 410 Gene3D - 246 410 IPR027417 -
Bhi11g01299 410 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 21 403 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00374 Bhi-Chr1:6498017 Bhi11g01299 Bhi-Chr11:38366572 8.12E-93 dispersed
Bhi09g00364 Bhi-Chr9:7599653 Bhi11g01299 Bhi-Chr11:38366572 0 dispersed
Bhi11g01299 Bhi-Chr11:38366572 Bhi01g00894 Bhi-Chr1:16913944 1.05E-67 dispersed
Bhi12g01180 Bhi-Chr12:35064430 Bhi11g01299 Bhi-Chr11:38366572 1.26E-64 dispersed
Bhi11g01298 Bhi-Chr11:38348665 Bhi11g01299 Bhi-Chr11:38366572 9.88E-67 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01299 K13025 - csv:101222664 801.586