Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01337 TTGTATGATTTTGTATATTTCAGGAGGAGCTTGTGGTTATGGAAATTTGTTCACAAACGGCTACGGCGTGGACACGGTGGCTCTAAGCTCTACCCTCTTCAACAATGGCTACGCTTGTGGAACTTGCTTTCAAATCAAATGCGCCCAATCCAAAGCATGTTACCCTAATGTTGCTTTCACGACTGTGACGGCGACCAACCTTTGTCCTCCAAACTGGGCCAAACCGTCCAACAACGGCGGGTGGTGCAACCCTCCAAGGGTTCACTTCGACATGTCGAAGCCAGCCTTCATGAAGATTGCCAATTGGAAGGCCGGGATCATCCCCGTCGTGTATCGACGAGTCCCTTGTGGTAAAAAGGGCGGCCTTCGGTTCACATTACAGGGAAATGGTTACTGGCTTTTGGCGTACGTGATGAACGTTGGTGGTGGCGGAGACGTGTCTGGAATGTGGGTGAAAGGCAGCAAAACAGGGTGGATCAAAATGAGCCATAATTGGGGAGCTTCATATCAAGCATTTTCATCTTTGGTTGGCCAATCATTGTCTTTTAGAATCACTTCTTACTCAACCAAAGAGACTATCACAGCTTGGAACGTTGCTCCTTCTAATTGGAGGTTTGGATTAACCTATAATGCCAATGTCAACTTTCGCTGATCTCTACAAATTATTCGAAGAGGCTGATAAGATATAATATGAGCTACAATATAACAACCACGTTGAATAATTTACTAGTTGTGTGTGAGGTGTTCGAAATAATTTAAGTCAATCTGACTTAAATATTTCATAATGAATTCATTTTAGATTTTGAATTGAATTGAATTCATTATCTTTACGTGGACACCCCTACCTTTA 850 43.18 MILYISGGACGYGNLFTNGYGVDTVALSSTLFNNGYACGTCFQIKCAQSKACYPNVAFTTVTATNLCPPNWAKPSNNGGWCNPPRVHFDMSKPAFMKIANWKAGIIPVVYRRVPCGKKGGLRFTLQGNGYWLLAYVMNVGGGGDVSGMWVKGSKTGWIKMSHNWGASYQAFSSLVGQSLSFRITSYSTKETITAWNVAPSNWRFGLTYNANVNFR 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 39495196 39496045 + XM_039050003.1 Bhi11g01337 50049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01337 215 PRINTS Expansin/Lol pI family signature 6 24 IPR007118 GO:0005576
Bhi11g01337 215 PRINTS Expansin/Lol pI family signature 28 46 IPR007118 GO:0005576
Bhi11g01337 215 PRINTS Expansin/Lol pI family signature 103 119 IPR007118 GO:0005576
Bhi11g01337 215 PRINTS Expansin/Lol pI family signature 157 171 IPR007118 GO:0005576
Bhi11g01337 215 PRINTS Expansin/Lol pI family signature 196 210 IPR007118 GO:0005576
Bhi11g01337 215 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 7 120 IPR007112 -
Bhi11g01337 215 Pfam Expansin C-terminal domain 122 199 IPR007117 -
Bhi11g01337 215 SUPERFAMILY PHL pollen allergen 117 209 IPR036749 -
Bhi11g01337 215 Gene3D - 116 215 IPR036749 -
Bhi11g01337 215 PANTHER EXPANSIN-A7 7 215 - -
Bhi11g01337 215 SUPERFAMILY Barwin-like endoglucanases 6 138 IPR036908 -
Bhi11g01337 215 Pfam Lytic transglycolase 24 110 IPR009009 -
Bhi11g01337 215 PRINTS Expansin signature 19 33 IPR002963 GO:0009664
Bhi11g01337 215 PRINTS Expansin signature 59 69 IPR002963 GO:0009664
Bhi11g01337 215 PRINTS Expansin signature 78 95 IPR002963 GO:0009664
Bhi11g01337 215 PRINTS Expansin signature 95 108 IPR002963 GO:0009664
Bhi11g01337 215 PRINTS Expansin signature 119 131 IPR002963 GO:0009664
Bhi11g01337 215 PRINTS Expansin signature 131 152 IPR002963 GO:0009664
Bhi11g01337 215 PRINTS Expansin signature 196 212 IPR002963 GO:0009664
Bhi11g01337 215 SMART dpbb_1 24 110 IPR007112 -
Bhi11g01337 215 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 130 210 IPR007117 -
Bhi11g01337 215 Gene3D - 4 115 IPR036908 -
Bhi11g01337 215 PANTHER EXPANSIN-A15 7 215 IPR002963 GO:0009664
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g01337 Bhi-Chr11:39495196 Bhi12g00340 Bhi-Chr12:10448928 1.47E-132 dispersed
Bhi11g01337 Bhi-Chr11:39495196 Bhi06g00957 Bhi-Chr6:26359497 1.10E-85 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01337 - - bhj:120091854 466.077