Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01427 ATGGAGTTGGGTTTGAGATTAGGAAATGATCAAAACCCTCCTCCTCCTCCTTCTTCTTCTTCACACCCAACACCTCTTCATTTTTCCCTTTCTTTTTCCTCCATTCTTCAACCATGTAATGAACATCAACCCCACAATCACAAACACCAAAACCACCTCCTTCCCCTTTCTCTTAATTCTTCTCCGCCGCCCGCCGCCACCTCCCGTCGATCTTCTCAAACCGAAGGATCAGAAGGAGCAGGTGTCTTTACAGAGGTGATAAGCGGAGCAGCGGCGGACGACGAGGGTGGAGGAGAATTGGGAAGATCAAATGGAATAGTTTGGTCAATAAGAAATAATAGGGAAGAAAGAGAGGAGGAAGAAGATGAAGAAGAAGAAGAAACGAATTTGGGTAGCAGAAAAAAATTGAGGCTTACAAGACAACAATCGGCGTTTCTTGAAGAAAGCTTCAAACAACACCATACGCTTTACCCTAAGCAAAAGCTAGAAGTTGCAAGAAGACTGAATCTTCGTCCTCGTCAAGTAGAAGTTTGGTTTCAAAACAGACGAGCAAGAACGAAGCTGAAGCAAACAGAAGTAGAGTGTGAATACTTGAAGAAATATTGCGCAACATTGACCCAACAAAACACAAAGCTTCAAAAGGAACTTCAAGATTTGAGAGCTTTAAAAACTACCCATTCTCTCTTCATGCACTCTCCCGCCACCACTCTCACCTTGTGCGCGTCTTGTGAACGCGCCGCCGCAACCCCAAACTCCCGCTGAATAACACTTCCACCCCCTTC 782 45.14 MELGLRLGNDQNPPPPPSSSSHPTPLHFSLSFSSILQPCNEHQPHNHKHQNHLLPLSLNSSPPPAATSRRSSQTEGSEGAGVFTEVISGAAADDEGGGELGRSNGIVWSIRNNREEREEEEDEEEEETNLGSRKKLRLTRQQSAFLEESFKQHHTLYPKQKLEVARRLNLRPRQVEVWFQNRRARTKLKQTEVECEYLKKYCATLTQQNTKLQKELQDLRALKTTHSLFMHSPATTLTLCASCERAAATPNSR 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 41371496 41373465 - XM_039049743.1 Bhi11g01427 50139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01427 253 MobiDBLite consensus disorder prediction 23 41 - -
Bhi11g01427 253 ProSiteProfiles 'Homeobox' domain profile. 129 189 IPR001356 GO:0003677
Bhi11g01427 253 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HOX11-LIKE 1 249 - -
Bhi11g01427 253 Coils Coil 202 222 - -
Bhi11g01427 253 Gene3D - 131 195 - -
Bhi11g01427 253 Coils Coil 107 130 - -
Bhi11g01427 253 MobiDBLite consensus disorder prediction 1 80 - -
Bhi11g01427 253 CDD homeodomain 133 190 IPR001356 GO:0003677
Bhi11g01427 253 Pfam Homeobox associated leucine zipper 189 223 IPR003106 GO:0006355|GO:0043565
Bhi11g01427 253 MobiDBLite consensus disorder prediction 113 133 - -
Bhi11g01427 253 SMART HOX_1 131 193 IPR001356 GO:0003677
Bhi11g01427 253 PANTHER - 1 249 - -
Bhi11g01427 253 SUPERFAMILY Homeodomain-like 130 198 IPR009057 -
Bhi11g01427 253 MobiDBLite consensus disorder prediction 50 79 - -
Bhi11g01427 253 Pfam Homeodomain 133 187 IPR001356 GO:0003677
Bhi11g01427 253 ProSitePatterns 'Homeobox' domain signature. 164 187 IPR017970 GO:0000981|GO:0006355
Bhi11g01427 253 SMART halz 189 232 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g01427 Bhi-Chr11:41371496 Bhi11g02524 Bhi-Chr11:68248543 2.19E-54 dispersed
Bhi11g01427 Bhi-Chr11:41371496 Bhi09g00593 Bhi-Chr9:12705345 9.75E-59 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2386 PF00046 Homeodomain 2.60E-14 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01427 K09338 - csv:101208907 324.324