Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01465 CATGGACTTTCCTCTCAATCCTTTCTTCTATATATCTTCTCATTTCTCCCTTTTTCCACTCTTAAATCCCTTCTGGGTCGTCCTCAAACTCTCTCAAAATCATATCTTTCCTTCTTTTTTCACTTGGCTTTTCACTGCCTATGGCTGCCTTTTCCTCTTGGTTGTTGGATTCTGTTGATACTTCTTTAGATCTCAATACTCAGCCTCTCAGATTCTCCGGTGAAGCTCCGAAGGAGAGGAATTATATGGATGTTGAGAGGAAGGTTTCTGTGAAAGAAGAGACTGGGGCTTTAATGGAGGAATTGAAGAGGGTAAGTGCAGAGAACAAGAAATTGACTGAAATGTTGACTGTTGTGTGTGAAAACTACAACACTTTGAGAGGGCATTTGATGGAACAAATGAACAAAAATGGAGAAAAGGAGATTTCTTCTTCAAAGAAGAGGAAATCAGAAAGCAGCAATAACAATAATAATATGGTTGGAATGAATGGGAATTCTGAGAGTAGTTCAACTGATGAAGAATCTTATAAGAAACCAAAAGAAGAAACCATAAACAAATCTGCTAAAATCACTAGAGTTCAAGTCAAAATTGGAGCTTCTGATTCAAATCTGGTTGTTAGAGATGGATTTCAATGGAGGAAATATGGCCAAAAAGTCACTAGAGATAATCCTTGTCCTAGAGCTTATTTCAAATGCTCTTTTGCTCCTAGTTGCCCTGTTAAAAAGAAGGTTCAAAGAAGTGTAGAAGATCAATCAGTACTTGTAGCCACATATGAAGGTGAACACAATCATCCACACCCATCTCAGATTGAGGCAACTTCCGGTGGCTCCTCCGCCCGTAGCGTCAGCATAGCTCCAGCGGTGCTCACGGCAGCGCCGGGATCCTCGTCGGCGCCGGCAATTTCCCTTGACTTGGCGAAGCCGAAGCCGACCATGGAAGCTAAAACGATCCCCAACCCAAGATTTGACTCGCCGGAAATGCAACAATTTCTCGTTGAACAGATGGCCTCTTCCTTAACCAAAGATCCCAAATTCACGGCGGCGCTTGCGGCGGCGATTTCGGGAAAGATTTTCCCACATTGATTAAAGCCTTCGGAGTTTTGAAGTTTAAAAGTTCGGGATAAGATCTCTAATCCCAGTCAGATTAATCTGTAAATACACACCAGAGAAGATTTGAAGGATTTTAGGAGGTGGAAGATAGTTTTGATATTTTTAAAAAGAGAAAAAAAAACGTTGAAAAAAAGTACTAAAAATGGGTGAAAATGAAAATTCATTAGAAATTCAAATTGGGTACTTGGTTGACGTTTTTGGGTCGTCGAACAATTTCAATTTGTAATGCGAAATTCTTCAACATTCGAATTTTTTATCAATAAGAATTCTCTCAAGTTTATATGTAAACA 1399 39.74 MAAFSSWLLDSVDTSLDLNTQPLRFSGEAPKERNYMDVERKVSVKEETGALMEELKRVSAENKKLTEMLTVVCENYNTLRGHLMEQMNKNGEKEISSSKKRKSESSNNNNNMVGMNGNSESSSTDEESYKKPKEETINKSAKITRVQVKIGASDSNLVVRDGFQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPHPSQIEATSGGSSARSVSIAPAVLTAAPGSSSAPAISLDLAKPKPTMEAKTIPNPRFDSPEMQQFLVEQMASSLTKDPKFTAALAAAISGKIFPH 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 42394243 42396051 - XM_039047257.1 Bhi11g01465 50177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01465 313 Pfam WRKY DNA -binding domain 161 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi11g01465 313 SUPERFAMILY WRKY DNA-binding domain 157 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi11g01465 313 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 12 310 IPR044810 GO:0003700
Bhi11g01465 313 PANTHER TRANSCRIPTION FACTOR 12 310 - -
Bhi11g01465 313 MobiDBLite consensus disorder prediction 102 123 - -
Bhi11g01465 313 MobiDBLite consensus disorder prediction 90 136 - -
Bhi11g01465 313 SMART WRKY_cls 159 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi11g01465 313 ProSiteProfiles WRKY domain profile. 154 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi11g01465 313 Gene3D WRKY domain 143 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00045 Bhi-Chr4:1381863 Bhi11g01465 Bhi-Chr11:42394243 1.30E-60 dispersed
Bhi09g03003 Bhi-Chr9:77900820 Bhi11g01465 Bhi-Chr11:42394243 2.89E-56 dispersed
Bhi09g03004 Bhi-Chr9:77900910 Bhi11g01465 Bhi-Chr11:42394243 2.89E-56 dispersed
Bhi11g01465 Bhi-Chr11:42394243 Bhi09g03002 Bhi-Chr9:77900817 9.92E-67 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2390 PF03106 WRKY 6.90E-23 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01465 - - csv:101218366 524.242