Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01466 TGTGCCGATTGTGATTTGTGACAGCCCACTGCAACCAACACCAACAAAATTAAACCATTTTCTCTTCTCTTCTGTTCTTTTCTTCAATGGCTTTGGCTTGCCTGGATCTCTTTCAAATCTTCTCCTCTTTCTTTATAATCATCATTTCCATTATCCAATTCCCCTGTTTCTCCCCCACACCTCACTCTTACACCTACCCTTTTCTCCCCCTTCCTGTTTTCTCATCAAAATGTTAAAACCCCTTGTTGGAAACTCTGTTTTTAGCCTTCCTTGAAGTGAAATCGGAGATGGCGGGTGAGGCGCCGCCGCGGATGAATGTTCTGTTTGGGAAATACGAAATGGGTCGGCTATTGGGTAAAGGGACCTTTGCCAAGGTCTATTATGGAAGAAACTTGATGACCCACGAGAGTGTCGCCATTAAAGTGATCCTCAAGGACAGGGTGAAGAAAGAGGGGCTTCTTGAGCAAATCCGGCGAGAAATTTCTGTCATGGGGTTGGTTCGTCATCCCCATATTGTGGAATTGAAAGAAGTAATGGCTACGAAATCGAAGGTGTATTTTGTGATGGAGTATGTTAATGGAGGCGAACTGTTTGTGAAATTGTCTCAACAAGGAAAATTGACTGAAGATGGAGCAAGAAAGTATTTTCAACAACTTATCTCCGCCGTGGACTTTTGCCACAGCCGTGGTGTCTCTCACCGTGATTTGAAGCCTGAAAATCTCCTTCTTGACGAGAATGGGAATTTGAAGGTCTCTGATTTTGGCCTCTCTGCCCTGCCGGAGCAGCTCCGGATCGACGGTTTGCTTCACACACGGTGTGGAACTCCGGCATATGTGGCGCCTGAGGTGCTCAGAAAGAAGGGCTACGATGGCGCTAAGGCGGATATTTGGTCTTGTGGGGTGATTTTGTTTGTGTTGCTTGCTGGGACACTGCCATTTCGAGCTGATAATGTGATGAAGTTGTATAGAAAGATTTTCAAGGCGGAGTTTGAATTTCCTCCATGGTTTTCTTCAGAAGCCATGGAAATGGTGTCTAAGCTTCTAGTTGTTGATCCTCAAAAGAGAGCTTCAATGGTTGAGATAATGCAGAGTCCTTGGTTTCAAAAGGGCTTCACAAAACCAGTTTCATTCGCTGAGAAAGATGAATTCAGCAATGAATTCTCTGAATTAGCAAATCCCAAGTTTTTGTCATCTCCTCCTTTTTACAATGCCTTTGAGTTCATTTCCTCAATGTCCTCTGGTTTTGACTTATCTAGTTTGTTTGAAAGCAAGAAGAGACGAGGCTCCATTTTCACTTCAAAATGCTCTCCTTCAGCAATTATAGCCAAGCTTCAATCTCTAGCCGTGAAGCTCAACTTCAAGGCTACTAACCTGAGGGAGTTCAAGGTGAGACTGCAGGCCAAGGAGGAAGGGAGGAAAGGGAAATTGGCAGTCACCGCAGAGGTTTACGAGGTGGCACCGGAGCTGGCGGTGGTCGAGTTCTCGAAATCAACCGGCGACACTTTGGAGTACAATAAGTTTTGTGAGAAGGATGTGAGGCCTGCATTGAAAGACATAGTTTGGAGCTGGCAAGGAGAGAATGAGTGCCTATTAACAGTGGATTCTTTGCAAAATGACCATTGAGGGAGAAAAAGAAGCCATTTTTGTGCATGATGGACAGGAATTTCTCTTTGAAATTCCCTTTTTAATGTGTTTGGAGGAGGGAAGAATGTATAGACTAAAGTATGGCATTGAATGGTTCTGGTTTAGATTAGAAGACAGTGTGAGTTGATAGCTATGTGTTTGGAATTGGTCAACTTTGTGAATACTTAATAGGATTTGCTTGTAAAATACTTGGCTTTGTTAAAGAGTGATCAGTTTATTAGTTTTGATAAATTTCATATAACAAATTTATGTTATATGGGCTTTGACCATTTGTAATTTGTCTAATGTTTTTGGGGGTCTTGAATATAAATTTTTGACATATAATACAATTCTTA 1978 42.42 MAGEAPPRMNVLFGKYEMGRLLGKGTFAKVYYGRNLMTHESVAIKVILKDRVKKEGLLEQIRREISVMGLVRHPHIVELKEVMATKSKVYFVMEYVNGGELFVKLSQQGKLTEDGARKYFQQLISAVDFCHSRGVSHRDLKPENLLLDENGNLKVSDFGLSALPEQLRIDGLLHTRCGTPAYVAPEVLRKKGYDGAKADIWSCGVILFVLLAGTLPFRADNVMKLYRKIFKAEFEFPPWFSSEAMEMVSKLLVVDPQKRASMVEIMQSPWFQKGFTKPVSFAEKDEFSNEFSELANPKFLSSPPFYNAFEFISSMSSGFDLSSLFESKKRRGSIFTSKCSPSAIIAKLQSLAVKLNFKATNLREFKVRLQAKEEGRKGKLAVTAEVYEVAPELAVVEFSKSTGDTLEYNKFCEKDVRPALKDIVWSWQGENECLLTVDSLQNDH 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 42460622 42462599 + XM_039049087.1 Bhi11g01466 50178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01466 444 Gene3D Kinase associated domain 1, KA1 304 426 - -
Bhi11g01466 444 CDD CIPK_C 307 421 - -
Bhi11g01466 444 ProSiteProfiles NAF domain profile. 301 326 IPR018451 GO:0007165
Bhi11g01466 444 PANTHER - 9 434 - -
Bhi11g01466 444 CDD STKc_SnRK3 15 270 - -
Bhi11g01466 444 SUPERFAMILY Protein kinase-like (PK-like) 12 294 IPR011009 -
Bhi11g01466 444 ProSiteProfiles Protein kinase domain profile. 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi11g01466 444 Pfam Protein kinase domain 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi11g01466 444 ProSitePatterns Protein kinases ATP-binding region signature. 22 54 IPR017441 GO:0005524
Bhi11g01466 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Bhi11g01466 444 SMART serkin_6 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi11g01466 444 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 25-RELATED 9 434 - -
Bhi11g01466 444 Pfam NAF domain 303 359 IPR004041 GO:0007165
Bhi11g01466 444 Gene3D Transferase(Phosphotransferase) domain 1 7 303 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g01466 Bhi-Chr11:42460622 Bhi03g02208 Bhi-Chr3:48212829 3.20E-167 dispersed
Bhi11g01466 Bhi-Chr11:42460622 Bhi09g03001 Bhi-Chr9:77738172 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88381 PF00069 Pkinase 1.50E-76 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01466 - - csv:101218600 815.453