Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01474 GTGGAGTGTTCCACGTCCATTTTCACTCCTTCCGCTCCCTTTCCCTCAGAAATGGCTGGAGAAACTCCCGATGGCCATTCCTCCGGCAATCCGCCTTCGACGCCTGATTCCCCCACCACCTCCGCCGGTTTCGAAACAGACCAGCTCCCTCATCTCAGCCAAACTTCCGACACCTACCCTGATGAGGACGAAGCCGCCGTCGATCCTCATATCCTTCCCGACGAGCCTGACCCCGATGAAGAGGAGGAAGGAGAGGATCTCTACCACGACAATTTCTTGGATGATTATCGGAGAATGGATGAGCATGACCAGTACGAGTCCTTGGGCCTCGACGATTCTTTAGAGGACGAGAGGGATTTGGATCAGATTATGGAGGACAGACGAGCTGCCGAGATGGAACTGGAAACTCGAGATGCTCAGTTAACCCGTCGGAAGCTTCCTGAGCTATTACATGATCATGACTCCGAGGATGACAACTACAGGCCTTCAAAAAGATCAAGAGCTGATTTTCGGCCTCCAGCTGCAGCAAGAAGCTACGATGACATTGATGGTATGCAAAGTTCTCCGGGTAGATCCCAAAGGGAAAACTCACGAGATGATGTGCCCATGACAGATCATTCTGTTGATGACCAATATGAGGATGAAGACGATGATGAAAATGAGCATGAGATGTATCGTGTTCAAGGGCCACTTAGAGAACATGTTACCATGGATGCGGTTCGGCGCTTTATAGGCAAAAAATTTAAGAAATTCTTGGAAACATATGTGAATCCAAAGAGTGGAAATGGTGAGCTTGAGTACATGCGATTGATAAATGAGATGGTGCTAGCCAATAGGTGCAGTTTGGAGATTGATTACAAACAGTTCATCTTTGTTCATCCAAATATTGCAATCTGGTTGGCTGATGCACCCCAGCCCGTCTTAGAAGTTATGGAAGATGTTGCAAAGAAGGTTGTCTTTGACATACATCCAAACTACAAAAATATCCACCAAAAGATCTATGTTCGCATCAATAATTTACCAGTCTATGATCAGATTCGAAATATTAGGCAAATTCATTTAAATACCATGATTCGCATCGGAGGCGTAGTGACCCGACGCTCTGGTGTCTTCCCCCAGTTGCAGCAGGTGAAGTATGATTGTAATAAATGTGGCACAATATTGGGACCATTTTTTCAGAATTCCTATTCAGAGGTCAAGGTTGGTTCTTGTCCTGAATGCCAATCGAAAGGGCCATTCACAGTAAATGTCGAGCAGACTGTATATAGGAATTATCAAAAGCTAACCCTCCAAGAAAGTCCTGGAATTGTGCCAGCTGGTAGACTTCCAAGGTACAAGGAAGTGATACTATTGAATGATCTAATTGATTGTGCCCGTCCTGGGGAAGAAATTGAAGTCACGGGCATTTATACAAATAATTTTGACTTATCATTGAATACAAAGAACGGGTTTCCTGTATTTTCCACCGTTGTTGAAGCAAATTATATTACCAAAAAGCAAGATTTATTTTCTGCTTACAAGCTTACCCAGGAAGACAAGGAAGAGATTGAGAAGTTGGCTAAAGACCCTAGAATTGGAGAAAGGATAATCAAGTCCATTGCACCATCAATCTATGGTCACGAGGACATAAAAACAGCAATTGCTCTTGCAATGTTTGGAGGTCAAGAAAAAAATGTTGAAGGGAAACACAGGTTACGAGGTGATATCAATGTTCTTCTACTAGGTGATCCTGGCACAGCCAAATCTCAGTTTCTCAAATATGTTGAGAAAACTGGGCATAGAGCAGTGTACACCACAGGGAAAGGAGCTTCAGCTGTAGGACTAACAGCAGCAGTGCATAAGGATCCCGTCACAAGGGAGTGGACCCTTGAAGGAGGTGCCCTTGTATTAGCTGATAGAGGAATCTGTCTTATTGATGAGTTTGACAAAATGAATGATCAGGACAGGGTGAGTATCCATGAAGCAATGGAGCAGCAGAGCATTAGCATATCAAAAGCTGGAATAGTCACTTCTCTTCAAGCCAGATGTTCGGTCATCGCTGCTGCCAATCCCATTGGAGGAAGGTATGACTCCTCGAAAACATTTTCACAAAATGTTGAGCTGACCGATCCTATCATTTCTCGTTTTGACATCCTCTGCGTTGTTAAGGATGTGGTAGACTCTGTAACAGACGAGATGCTTGCTAGGTTTGTAGTTGATAGTCATTTCAAATCACAGCCAAAGGGAGTCAATCTTGACGACAAGTCTATAAATGAATCCCAGGAGGACAGTCAAGACTCTGCAAGGCCACTGGATCCGGAGGTGCTCCCCCAAGATCTGCTGAGGAAATACATAACTTATTCTAAGTTGAATGTTTTTCCAAGGTTGCATGATGCTGATTTGGATAAGTTGACACATGTCTATGCAGAATTACGAAGGGAATCTTCTCATGGGCAAGGAGTTCCTATTGCAGTTAGGCACATAGAGTCAATGATACGCATGTCTGAAGCGCATGCAAGAATGCACCTTAGACAGCATGTCACGCAAGAAGATGTTGATATGGCAATTCGTGTGTTACTTGATTCTTTCATTTCGACCCAGAAATTTGGAGTGCAGAAAGCTCTGCAAAAGAGCTTCAGAAAGTATATGACTTTCAAGAAGGATTACAATGAACTGCTGCTATATCTTCTCCGAGAACTTGTGAAGAATGCACTTCACTTTGAGGAAATTGTTCGTGGATCTACATCGGAGCTTACCCAAATCAATGTGAAACTGGAAGACCTACAAAGCAAGGCACAAGATCATGAAATTTATGATCTGAAACCCTTCTTCAACAGCTCTCATTTTTCAAATGCTAAATTTGTGCTGGATGAAGAGCATGGACTAATCAGGCATCACCTTGCCAGATGATTTAAGGATTATGATTGGAAATGGATTAGATAGGTAGTTATCTTACTGAATTGATGATATTCGTAATGGGATTCAAAGGACTACCCTGTTTTGAGAATTTAGAGGTGTATTGTTTTCGGATCTTCATTTAATCCAATTAAGAACAAGTTAAAGAACTTCTATTC 3053 42.94 MAGETPDGHSSGNPPSTPDSPTTSAGFETDQLPHLSQTSDTYPDEDEAAVDPHILPDEPDPDEEEEGEDLYHDNFLDDYRRMDEHDQYESLGLDDSLEDERDLDQIMEDRRAAEMELETRDAQLTRRKLPELLHDHDSEDDNYRPSKRSRADFRPPAAARSYDDIDGMQSSPGRSQRENSRDDVPMTDHSVDDQYEDEDDDENEHEMYRVQGPLREHVTMDAVRRFIGKKFKKFLETYVNPKSGNGELEYMRLINEMVLANRCSLEIDYKQFIFVHPNIAIWLADAPQPVLEVMEDVAKKVVFDIHPNYKNIHQKIYVRINNLPVYDQIRNIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCNKCGTILGPFFQNSYSEVKVGSCPECQSKGPFTVNVEQTVYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIYTNNFDLSLNTKNGFPVFSTVVEANYITKKQDLFSAYKLTQEDKEEIEKLAKDPRIGERIIKSIAPSIYGHEDIKTAIALAMFGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGHRAVYTTGKGASAVGLTAAVHKDPVTREWTLEGGALVLADRGICLIDEFDKMNDQDRVSIHEAMEQQSISISKAGIVTSLQARCSVIAAANPIGGRYDSSKTFSQNVELTDPIISRFDILCVVKDVVDSVTDEMLARFVVDSHFKSQPKGVNLDDKSINESQEDSQDSARPLDPEVLPQDLLRKYITYSKLNVFPRLHDADLDKLTHVYAELRRESSHGQGVPIAVRHIESMIRMSEAHARMHLRQHVTQEDVDMAIRVLLDSFISTQKFGVQKALQKSFRKYMTFKKDYNELLLYLLRELVKNALHFEEIVRGSTSELTQINVKLEDLQSKAQDHEIYDLKPFFNSSHFSNAKFVLDEEHGLIRHHLAR 945
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 42860460 42866756 + XM_039047209.1 Bhi11g01474 50186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01474 945 Gene3D - 221 325 - -
Bhi11g01474 945 PRINTS Mini-chromosome maintenance (MCM) protein family signature 549 564 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bhi11g01474 945 PRINTS Mini-chromosome maintenance (MCM) protein family signature 609 623 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bhi11g01474 945 PRINTS Mini-chromosome maintenance (MCM) protein family signature 637 650 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bhi11g01474 945 PRINTS Mini-chromosome maintenance (MCM) protein family signature 661 673 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bhi11g01474 945 PRINTS Mini-chromosome maintenance (MCM) protein family signature 688 696 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bhi11g01474 945 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 518 842 IPR027417 -
Bhi11g01474 945 Gene3D - 488 862 IPR027417 -
Bhi11g01474 945 Pfam MCM OB domain 328 455 IPR033762 -
Bhi11g01474 945 ProSitePatterns MCM family signature. 617 625 IPR018525 GO:0003677|GO:0005524|GO:0006260
Bhi11g01474 945 MobiDBLite consensus disorder prediction 73 94 - -
Bhi11g01474 945 MobiDBLite consensus disorder prediction 731 745 - -
Bhi11g01474 945 MobiDBLite consensus disorder prediction 1 204 - -
Bhi11g01474 945 CDD MCM2 511 838 - -
Bhi11g01474 945 MobiDBLite consensus disorder prediction 9 43 - -
Bhi11g01474 945 SUPERFAMILY Nucleic acid-binding proteins 230 477 IPR012340 -
Bhi11g01474 945 Pfam Mini-chromosome maintenance protein 2 45 200 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Bhi11g01474 945 ProSiteProfiles MCM family domain profile. 508 714 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bhi11g01474 945 PANTHER DNA HELICASE 145 938 - -
Bhi11g01474 945 MobiDBLite consensus disorder prediction 57 72 - -
Bhi11g01474 945 Gene3D - 329 454 IPR012340 -
Bhi11g01474 945 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 338 355 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Bhi11g01474 945 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 361 373 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Bhi11g01474 945 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 396 410 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Bhi11g01474 945 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 457 468 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Bhi11g01474 945 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 472 483 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Bhi11g01474 945 Pfam MCM N-terminal domain 229 322 IPR027925 -
Bhi11g01474 945 Gene3D - 356 406 - -
Bhi11g01474 945 Pfam MCM P-loop domain 496 718 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bhi11g01474 945 MobiDBLite consensus disorder prediction 176 191 - -
Bhi11g01474 945 MobiDBLite consensus disorder prediction 103 159 - -
Bhi11g01474 945 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 145 938 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bhi11g01474 945 Pfam MCM AAA-lid domain 755 839 IPR041562 -
Bhi11g01474 945 SMART mcm 325 840 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bhi11g01474 945 MobiDBLite consensus disorder prediction 725 748 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00891 Bhi-Chr5:30690288 Bhi11g01474 Bhi-Chr11:42860460 2.88E-74 dispersed
Bhi05g00892 Bhi-Chr5:30690289 Bhi11g01474 Bhi-Chr11:42860460 1.60E-80 dispersed
Bhi06g01859 Bhi-Chr6:52174903 Bhi11g01474 Bhi-Chr11:42860460 2.47E-107 dispersed
Bhi09g00842 Bhi-Chr9:18490675 Bhi11g01474 Bhi-Chr11:42860460 1.22E-103 dispersed
Bhi11g01474 Bhi-Chr11:42860460 Bhi11g02141 Bhi-Chr11:60070667 2.90E-93 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01474 K02540 - csv:101219546 1765.36