Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01567 GCCCCAAACGCACTTTCACTTTAGCAAATTTGAGTAAAAAAAATATAATGATGCAGGCGGATCAAAGCTCTGAGCTTTACAGATTCCTGGCGCAGAACGGAGCCTTCAGCCTGGGCGGCGCCGCCGGATCTTGCCGCTTTCCGGCGACACAAAGCATGTCGAGCTCTTCCTCTTATTACCCTAATTTGGATAAGTCTCCGGCGGCGGCCGCCACTGAGGGAGCGGTGCCGTCGCCCCACGACAGAGCTCTGGCAGCCCTTAAGAATCACAAGGAAGCTGAGAAGCGGAGGAGAGAGAGAATCAACTCTCATCTTGATAAGCTTCGGACTCTTCTTCCTTGTAATTCTAAGACGGACAAGGCATCTCTTCTGGCAAAAGTGGTTGAGCGAGTGAAAGAGCTAAAGAACGAGACATCGGAGATCGCGGAGCTCGAGAGCTTCCCTTCGGAGACCGACGAGATCAGTGTCCTTTCCGGGGAGCAGTCAGAGGACGGAAGGCTTGTGTTCAAGGCATCATTGTGTTGCGAGGACCGCTCCGATCTCATCCCTGACCTCAACGACATACTTAATTCCCTCCACCTCAAAACCCTTAGGGCTGACATTGTCACGGTCGGTGGCCGGATTCGCAACGTCCTCCTTATCGCCGCTAACGACCACCACAGCGTCGAGTCCGTTCATTTCCTTCAAAATGCCTTGAAATCTCTTCTTGAACGCTCAAATTCTAGCCTTACATCCAAGAGGAGGCGTCTTGTACTTCACAAATGATCATAAATTCTCAATATCTATCCTTTTCTTTTCTCTCA 802 50.87 MMQADQSSELYRFLAQNGAFSLGGAAGSCRFPATQSMSSSSSYYPNLDKSPAAAATEGAVPSPHDRALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETSEIAELESFPSETDEISVLSGEQSEDGRLVFKASLCCEDRSDLIPDLNDILNSLHLKTLRADIVTVGGRIRNVLLIAANDHHSVESVHFLQNALKSLLERSNSSLTSKRRRLVLHK 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 45300299 45302164 - XM_039049374.1 Bhi11g01567 50279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01567 238 CDD bHLH_AtAIG1_like 65 140 - -
Bhi11g01567 238 SMART finulus 75 124 IPR011598 GO:0046983
Bhi11g01567 238 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 69 118 IPR011598 GO:0046983
Bhi11g01567 238 PANTHER TRANSCRIPTION FACTOR BHLH30 3 235 IPR045847 GO:0003700|GO:0006355
Bhi11g01567 238 Pfam Helix-loop-helix DNA-binding domain 73 118 IPR011598 GO:0046983
Bhi11g01567 238 Gene3D - 65 129 IPR036638 GO:0046983
Bhi11g01567 238 PANTHER TRANSCRIPTION FACTOR BHLH106-RELATED 3 235 - -
Bhi11g01567 238 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 69 125 IPR036638 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01142 Bhi-Chr3:22892386 Bhi11g01567 Bhi-Chr11:45300299 1.39E-19 dispersed
Bhi04g02292 Bhi-Chr4:63011984 Bhi11g01567 Bhi-Chr11:45300299 1.60E-36 dispersed
Bhi08g00529 Bhi-Chr8:17959657 Bhi11g01567 Bhi-Chr11:45300299 1.01E-54 dispersed
Bhi10g01086 Bhi-Chr10:22182583 Bhi11g01567 Bhi-Chr11:45300299 2.77E-37 dispersed
Bhi11g01567 Bhi-Chr11:45300299 Bhi08g01120 Bhi-Chr8:35682415 3.04E-08 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2403 PF00010 HLH 3.60E-12 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01567 - K22484 csv:101220675 376.326