Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi11g01567 | GCCCCAAACGCACTTTCACTTTAGCAAATTTGAGTAAAAAAAATATAATGATGCAGGCGGATCAAAGCTCTGAGCTTTACAGATTCCTGGCGCAGAACGGAGCCTTCAGCCTGGGCGGCGCCGCCGGATCTTGCCGCTTTCCGGCGACACAAAGCATGTCGAGCTCTTCCTCTTATTACCCTAATTTGGATAAGTCTCCGGCGGCGGCCGCCACTGAGGGAGCGGTGCCGTCGCCCCACGACAGAGCTCTGGCAGCCCTTAAGAATCACAAGGAAGCTGAGAAGCGGAGGAGAGAGAGAATCAACTCTCATCTTGATAAGCTTCGGACTCTTCTTCCTTGTAATTCTAAGACGGACAAGGCATCTCTTCTGGCAAAAGTGGTTGAGCGAGTGAAAGAGCTAAAGAACGAGACATCGGAGATCGCGGAGCTCGAGAGCTTCCCTTCGGAGACCGACGAGATCAGTGTCCTTTCCGGGGAGCAGTCAGAGGACGGAAGGCTTGTGTTCAAGGCATCATTGTGTTGCGAGGACCGCTCCGATCTCATCCCTGACCTCAACGACATACTTAATTCCCTCCACCTCAAAACCCTTAGGGCTGACATTGTCACGGTCGGTGGCCGGATTCGCAACGTCCTCCTTATCGCCGCTAACGACCACCACAGCGTCGAGTCCGTTCATTTCCTTCAAAATGCCTTGAAATCTCTTCTTGAACGCTCAAATTCTAGCCTTACATCCAAGAGGAGGCGTCTTGTACTTCACAAATGATCATAAATTCTCAATATCTATCCTTTTCTTTTCTCTCA | 802 | 50.87 | MMQADQSSELYRFLAQNGAFSLGGAAGSCRFPATQSMSSSSSYYPNLDKSPAAAATEGAVPSPHDRALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETSEIAELESFPSETDEISVLSGEQSEDGRLVFKASLCCEDRSDLIPDLNDILNSLHLKTLRADIVTVGGRIRNVLLIAANDHHSVESVHFLQNALKSLLERSNSSLTSKRRRLVLHK | 238 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 45300299 | 45302164 | - | XM_039049374.1 | Bhi11g01567 | 50279 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi11g01567 | 238 | CDD | bHLH_AtAIG1_like | 65 | 140 | - | - | |
Bhi11g01567 | 238 | SMART | finulus | 75 | 124 | IPR011598 | GO:0046983 | |
Bhi11g01567 | 238 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 69 | 118 | IPR011598 | GO:0046983 | |
Bhi11g01567 | 238 | PANTHER | TRANSCRIPTION FACTOR BHLH30 | 3 | 235 | IPR045847 | GO:0003700|GO:0006355 | |
Bhi11g01567 | 238 | Pfam | Helix-loop-helix DNA-binding domain | 73 | 118 | IPR011598 | GO:0046983 | |
Bhi11g01567 | 238 | Gene3D | - | 65 | 129 | IPR036638 | GO:0046983 | |
Bhi11g01567 | 238 | PANTHER | TRANSCRIPTION FACTOR BHLH106-RELATED | 3 | 235 | - | - | |
Bhi11g01567 | 238 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 69 | 125 | IPR036638 | GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi03g01142 | Bhi-Chr3:22892386 | Bhi11g01567 | Bhi-Chr11:45300299 | 1.39E-19 | dispersed | |
Bhi04g02292 | Bhi-Chr4:63011984 | Bhi11g01567 | Bhi-Chr11:45300299 | 1.60E-36 | dispersed | |
Bhi08g00529 | Bhi-Chr8:17959657 | Bhi11g01567 | Bhi-Chr11:45300299 | 1.01E-54 | dispersed | |
Bhi10g01086 | Bhi-Chr10:22182583 | Bhi11g01567 | Bhi-Chr11:45300299 | 2.77E-37 | dispersed | |
Bhi11g01567 | Bhi-Chr11:45300299 | Bhi08g01120 | Bhi-Chr8:35682415 | 3.04E-08 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
2403 | PF00010 | HLH | 3.60E-12 | No_clan | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi11g01567 | - | K22484 | csv:101220675 | 376.326 |