Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01604 ATCTCTCTCTCACATGTAACATTATTTAGGGATATCCCATAAATAAAGTTTGTTCCTTTTTCTCTCTCTCTCTCTATGGCTTCAACTTCATTTTGCTTAAGGTTTTCATACAAGAGATGTTGAAACAACAGCTTACAGAAAGGAGAAAAAATTATTGGAAGATGTCGTCTTCCACCTACTCCAATTCTCCATGTGCAGCCTGCAAATTCCTACGTCGAAAATGCCTACCAGATTGCGTTTTCGCACCGTATTTCCCGCCCGAAGAGCCCCAAAAGTTTGCCAATGTCCACAAGATCTTTGGCGCCAGTAATGTCAGCAAACTGCTGAATGAAGTCCAGCCGCATCAGCGGGAGGACGCCGTGAACTCGCTCGCCTATGAGGCCGAGGCGAGGATGAAAGACCCTGTCTATGGTTGCGTCGGCGCCATCTCTATACTCCAAAGGCAAGTCATCAAGCTCCAGAAAGAGCTCGACGCTACTAACGCCGACCTCATTCGCTATGCCTGCAGCGAAATCCCTGCCCCATCTCCGTCCTCGTCATCACAATATGCTCGAAAGTCGTCGTCTACGAGCCATGAGGCAAGCTCATCTACCTCTAGCTATGGTCATTACTATTCTGGTCTCTACTTTTCTCCATGGAGTAACAACAATAATGGCCCTTGTGGAGATGGCCATGACAAAGGAGAATACAAGTAAATAATATTTTTCCATTGAAATATATCATATCTTTATAATTTTATCATCACAAGAAGGATAATATATTCTCTCATATGTTAATTATAGGGGTGTGAAAATTTATGCATTTTGATTCATAAAAATATAATGATAATTACAAATTATACCCCATAAATTCGTCTAATTTGTAAATTATATCTCTATGTTTCAAAAAATAGTTTCAAACATTCTTGTAATTTGCAAAATTTAAAAATCAGAAATACCCTTTTGTTGGATATTACATATCTGTGACATATATATAGAATAAGTCTTTATATGTGTATGATCAATTTTTGTTAAAGGTCACCAATAAAAGGGGGGTATGATTTGCAAATCATAAGAATCTTTGGAATTATTTTTAAAACTTAGAGATATGAGTTTTAAAATAGACAAAAGTATGAAGGTGTAATTTGCAATTATCTTGAAATATATAAATATATGTGTGTTGTATATTTTTTAAGGTTTGTCCATGCCCTTGTAGGGTTTCTCTATCTTAAATACCTCTTTGGAATGATGAGGGGAATTTAATGTAACTATTTCAATTATTAGTGGTTTTTATCTTGTCAACTTTTGTGTATAATATTATTAATTACTTTTTTCTTCTTGAATATTCAGAACTTTAAATTCTTATTTTATATAATTTTGAGGTTGGTTCTTTTTTTTCTTTTTTTTAAAAAAAAATTGAATATATGTTAATAGAACATTTTGTCCAATTCTGGAACTTTTGATTTTCTAGCATTATCTCATATTAATTTTGGAGATTTCATTTAATTCACAATATATATCTGATACTCAATG 1511 34.02 MLKQQLTERRKNYWKMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPAPSPSSSSQYARKSSSTSHEASSSTSSYGHYYSGLYFSPWSNNNNGPCGDGHDKGEYK 192
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 46239538 46242869 + XM_039049846.1 Bhi11g01604 50316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01604 192 MobiDBLite consensus disorder prediction 135 192 - -
Bhi11g01604 192 Pfam Lateral organ boundaries (LOB) domain 25 121 IPR004883 -
Bhi11g01604 192 Coils Coil 104 124 - -
Bhi11g01604 192 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 16 179 - -
Bhi11g01604 192 PANTHER LOB DOMAIN-CONTAINING PROTEIN 25 16 179 - -
Bhi11g01604 192 MobiDBLite consensus disorder prediction 135 182 - -
Bhi11g01604 192 ProSiteProfiles LOB domain profile. 24 125 IPR004883 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi06g00551 Bhi11g01604 CCT
Bhi06g00551 Bhi11g01604 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00500 Bhi-Chr2:9678665 Bhi11g01604 Bhi-Chr11:46239538 4.70E-73 dispersed
Bhi04g02291 Bhi-Chr4:62921926 Bhi11g01604 Bhi-Chr11:46239538 5.28E-50 dispersed
Bhi06g00552 Bhi-Chr6:12401588 Bhi11g01604 Bhi-Chr11:46239538 6.12E-78 dispersed
Bhi08g01650 Bhi-Chr8:46580059 Bhi11g01604 Bhi-Chr11:46239538 8.80E-61 dispersed
Bhi09g00376 Bhi-Chr9:7797823 Bhi11g01604 Bhi-Chr11:46239538 2.00E-28 dispersed
Bhi10g02237 Bhi-Chr10:58152963 Bhi11g01604 Bhi-Chr11:46239538 1.24E-50 dispersed
Bhi11g01604 Bhi-Chr11:46239538 Bhi10g00845 Bhi-Chr10:17099147 9.18E-50 dispersed
Bhi11g01604 Bhi-Chr11:46239538 Bhi06g00551 Bhi-Chr6:12401586 7.46E-82 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2404 PF03195 LOB 3.00E-42 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01604 - - csv:101219482 349.747