Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01646 TCGTTTTATCAAAAATTAAAATCAATATTCAATTTTGCAAAATTTCGAATTTCTCTGTGTAGTGTAGTTTGTAATTTGTATTTGTTAATTCGGAGTTCGAAAATGGCGGTTCTGCAGCTTCCTTGTGTGAGGATTATTGATTATTCATCTTCCCCATTGTTGAGAGGAAGTAAATCGTCGTTGTTTTGGGGAAGAGATTTGTGCTTTGGAAATGGAGGTATTAGGGATGGTCGGAGAGTGAAAGCTTCATTCAATGGTCGAGTTGTTAAGGTTTTCGCCATGTCCGATAGTTCTTCTTCTTCGTTTAAGATGAATCTCAATGAGTACATGGTTACTCTTGAGAAACCGCTCGGCATTCGGTTCGCGATTTCCGTCGATGGAAGAATCTTCGTTCACTCGCTTAAGAAAGGGGGTAATGCTGAGAAGTCAAGAATAATCATGGTGGGAGACACTTTAAAGAAGGCAAGCGATTCATCAGGCGTCAAGCTCACTGAGACTAAAGACTTTGGTGATACACAGATGATGCTGAAGGAGAAGGCAGGATCTTTTAGCCTGGTTCTTGAAAGACCTTTTTCTCCTTTTCCTATTCAACAGCTTCTGCTTTCAAACGATTTAGATATTTTATTTAACAGAGGTCGAGTGCCTATTGCTACTTGGAAGAAAGAAGTTTTGGCATCAAATTTACAAACATCTGATGCAAGCAGTGGGAACTCTGGCTTTGCAACTTTCTCCTCTAAGTTCTCAACAGCACAAGGTTGGAAACTTCTTAACGATCAAATTGAAGATGTAAAATCACATATACAGAGAAACATTCTCACACCTCAAATCAGCCAACTTGTTGGTATATTTACTGAAGAGGAGCCTGGAGATGGAGAATGGGCTCATGGGAGCTTCCCCCTAGATGAATATGTCAAGGCATTAGAACGGTCTAAAGGGGAGCTATATTATGATCACTCTCGTGGTATGAGCTATAGTAAGATCACGGAGCAAATCTATGTGGGGTCATGTATACAGACTGAAGCAGACGTAGAGGCTTTGTCAAACAACGTGGGAGTCACCGCTGTACTGAATTTTCAAAGTGCAACTGAGGCAGAAAACTGGGGGATTAATTCCAAGTTAATCAATGAGTCGTGCCAAAAATGTGATATTCTAATGATCAGCTATCCTATCAGGGAAGGAGATTCTTATGATTTGAGGAAAAAACTACCATTCTGTGTGGGTCTACTTTTACGACTGTTAAAAAAGAACCATCGAGTTTTTATAACTTGTACCTCTGGTTTCGATCGATCTCCAGCAAGTGTGATTGCATATCTACACTGGATGACCGATACTTCTCTTCATGCAGCTTATAATTTTATCACCAGTTTGCATTCCTGCAAACCTGACAGGCCTGCGATTGCTTGGGCAACCTGGGATCTCATAGCAATGGTGGAAAATGGAAGGCATGATGGACCGCCCACTCATGCCGTTACCTTCATATGGAATGGTCAAGAGGGGGAGGATGTAAATTTGGTTGGAGATTTTACTGGTAACTGGAAAGAACCGGTAAAGGCTAGTCACAAGGGTGGGCCTAGATATGAAGTAGAAATGAAACTTCCTCAGGGGAAGTATTACTATAAGTACATCACAAATGGTCAGTGGAGGCACTCAACATCTTCACCTGCTGAAAGAGACGATAGGGGGAATGTCAACAATGTAATAGTCATCGGCGACACTGCCAGTGTTAGGCCTTCGGTTCAACCGCAAAAAAAAGTAAGATGCAAATATCGTGAAGGTAATTGAAAGACCGCTGACAGAAAATGAGCGATTCATGTTGGCGAAAGCGGCTCGTTGTGTTGCCTTTTCAGTATGTCCAATTAGATTAACTCCCAAGTAGTTTGGACATAGTCAATTTTTAAAATCCTTTATTTTGTGTCTTAGTTATAATCCTACATCTACATATAGAAAAATAAATATTTCCATGAAAATCCTCATTTGCTCTAGGTTTCTTGTACTTAATAGTTAATACATGCAACATTAACACTGTAATATATAGATAAACTATATGGAAGCTTCCTCTCTCTCTCTCTCTCTCA 2075 40.19 MAVLQLPCVRIIDYSSSPLLRGSKSSLFWGRDLCFGNGGIRDGRRVKASFNGRVVKVFAMSDSSSSSFKMNLNEYMVTLEKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTLKKASDSSGVKLTETKDFGDTQMMLKEKAGSFSLVLERPFSPFPIQQLLLSNDLDILFNRGRVPIATWKKEVLASNLQTSDASSGNSGFATFSSKFSTAQGWKLLNDQIEDVKSHIQRNILTPQISQLVGIFTEEEPGDGEWAHGSFPLDEYVKALERSKGELYYDHSRGMSYSKITEQIYVGSCIQTEADVEALSNNVGVTAVLNFQSATEAENWGINSKLINESCQKCDILMISYPIREGDSYDLRKKLPFCVGLLLRLLKKNHRVFITCTSGFDRSPASVIAYLHWMTDTSLHAAYNFITSLHSCKPDRPAIAWATWDLIAMVENGRHDGPPTHAVTFIWNGQEGEDVNLVGDFTGNWKEPVKASHKGGPRYEVEMKLPQGKYYYKYITNGQWRHSTSSPAERDDRGNVNNVIVIGDTASVRPSVQPQKKVRCKYREGN 559
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 47294927 47300341 + XM_039047123.1 Bhi11g01646 50358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01646 559 Gene3D Protein tyrosine phosphatase superfamily 282 544 IPR029021 -
Bhi11g01646 559 CDD DSP_laforin-like 288 434 IPR045204 GO:0019203|GO:0046838
Bhi11g01646 559 Pfam Glycogen recognition site of AMP-activated protein kinase 456 537 IPR032640 -
Bhi11g01646 559 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 26 551 - -
Bhi11g01646 559 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 281 427 IPR029021 -
Bhi11g01646 559 Gene3D Immunoglobulins 443 539 IPR013783 -
Bhi11g01646 559 ProSiteProfiles Dual specificity protein phosphatase domain profile. 289 448 IPR020422 GO:0006470|GO:0008138
Bhi11g01646 559 Pfam Dual specificity phosphatase, catalytic domain 298 421 IPR000340 GO:0008138|GO:0016311
Bhi11g01646 559 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 26 551 IPR030066 GO:0005983
Bhi11g01646 559 CDD E_set_AMPKbeta_like_N 456 535 - -
Bhi11g01646 559 SUPERFAMILY E set domains 453 536 IPR014756 -
Bhi11g01646 559 ProSiteProfiles PDZ domain profile. 76 157 IPR001478 GO:0005515
Bhi11g01646 559 SUPERFAMILY PDZ domain-like 58 162 IPR036034 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00747 Bhi-Chr7:27785187 Bhi11g01646 Bhi-Chr11:47294927 2.35E-29 dispersed
Bhi11g01646 Bhi-Chr11:47294927 Bhi11g01648 Bhi-Chr11:47295304 0 dispersed
Bhi11g01646 Bhi-Chr11:47294927 Bhi11g01647 Bhi-Chr11:47294930 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01646 - - csv:101214241 1054.66