Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi11g01646 | TCGTTTTATCAAAAATTAAAATCAATATTCAATTTTGCAAAATTTCGAATTTCTCTGTGTAGTGTAGTTTGTAATTTGTATTTGTTAATTCGGAGTTCGAAAATGGCGGTTCTGCAGCTTCCTTGTGTGAGGATTATTGATTATTCATCTTCCCCATTGTTGAGAGGAAGTAAATCGTCGTTGTTTTGGGGAAGAGATTTGTGCTTTGGAAATGGAGGTATTAGGGATGGTCGGAGAGTGAAAGCTTCATTCAATGGTCGAGTTGTTAAGGTTTTCGCCATGTCCGATAGTTCTTCTTCTTCGTTTAAGATGAATCTCAATGAGTACATGGTTACTCTTGAGAAACCGCTCGGCATTCGGTTCGCGATTTCCGTCGATGGAAGAATCTTCGTTCACTCGCTTAAGAAAGGGGGTAATGCTGAGAAGTCAAGAATAATCATGGTGGGAGACACTTTAAAGAAGGCAAGCGATTCATCAGGCGTCAAGCTCACTGAGACTAAAGACTTTGGTGATACACAGATGATGCTGAAGGAGAAGGCAGGATCTTTTAGCCTGGTTCTTGAAAGACCTTTTTCTCCTTTTCCTATTCAACAGCTTCTGCTTTCAAACGATTTAGATATTTTATTTAACAGAGGTCGAGTGCCTATTGCTACTTGGAAGAAAGAAGTTTTGGCATCAAATTTACAAACATCTGATGCAAGCAGTGGGAACTCTGGCTTTGCAACTTTCTCCTCTAAGTTCTCAACAGCACAAGGTTGGAAACTTCTTAACGATCAAATTGAAGATGTAAAATCACATATACAGAGAAACATTCTCACACCTCAAATCAGCCAACTTGTTGGTATATTTACTGAAGAGGAGCCTGGAGATGGAGAATGGGCTCATGGGAGCTTCCCCCTAGATGAATATGTCAAGGCATTAGAACGGTCTAAAGGGGAGCTATATTATGATCACTCTCGTGGTATGAGCTATAGTAAGATCACGGAGCAAATCTATGTGGGGTCATGTATACAGACTGAAGCAGACGTAGAGGCTTTGTCAAACAACGTGGGAGTCACCGCTGTACTGAATTTTCAAAGTGCAACTGAGGCAGAAAACTGGGGGATTAATTCCAAGTTAATCAATGAGTCGTGCCAAAAATGTGATATTCTAATGATCAGCTATCCTATCAGGGAAGGAGATTCTTATGATTTGAGGAAAAAACTACCATTCTGTGTGGGTCTACTTTTACGACTGTTAAAAAAGAACCATCGAGTTTTTATAACTTGTACCTCTGGTTTCGATCGATCTCCAGCAAGTGTGATTGCATATCTACACTGGATGACCGATACTTCTCTTCATGCAGCTTATAATTTTATCACCAGTTTGCATTCCTGCAAACCTGACAGGCCTGCGATTGCTTGGGCAACCTGGGATCTCATAGCAATGGTGGAAAATGGAAGGCATGATGGACCGCCCACTCATGCCGTTACCTTCATATGGAATGGTCAAGAGGGGGAGGATGTAAATTTGGTTGGAGATTTTACTGGTAACTGGAAAGAACCGGTAAAGGCTAGTCACAAGGGTGGGCCTAGATATGAAGTAGAAATGAAACTTCCTCAGGGGAAGTATTACTATAAGTACATCACAAATGGTCAGTGGAGGCACTCAACATCTTCACCTGCTGAAAGAGACGATAGGGGGAATGTCAACAATGTAATAGTCATCGGCGACACTGCCAGTGTTAGGCCTTCGGTTCAACCGCAAAAAAAAGTAAGATGCAAATATCGTGAAGGTAATTGAAAGACCGCTGACAGAAAATGAGCGATTCATGTTGGCGAAAGCGGCTCGTTGTGTTGCCTTTTCAGTATGTCCAATTAGATTAACTCCCAAGTAGTTTGGACATAGTCAATTTTTAAAATCCTTTATTTTGTGTCTTAGTTATAATCCTACATCTACATATAGAAAAATAAATATTTCCATGAAAATCCTCATTTGCTCTAGGTTTCTTGTACTTAATAGTTAATACATGCAACATTAACACTGTAATATATAGATAAACTATATGGAAGCTTCCTCTCTCTCTCTCTCTCTCA | 2075 | 40.19 | MAVLQLPCVRIIDYSSSPLLRGSKSSLFWGRDLCFGNGGIRDGRRVKASFNGRVVKVFAMSDSSSSSFKMNLNEYMVTLEKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTLKKASDSSGVKLTETKDFGDTQMMLKEKAGSFSLVLERPFSPFPIQQLLLSNDLDILFNRGRVPIATWKKEVLASNLQTSDASSGNSGFATFSSKFSTAQGWKLLNDQIEDVKSHIQRNILTPQISQLVGIFTEEEPGDGEWAHGSFPLDEYVKALERSKGELYYDHSRGMSYSKITEQIYVGSCIQTEADVEALSNNVGVTAVLNFQSATEAENWGINSKLINESCQKCDILMISYPIREGDSYDLRKKLPFCVGLLLRLLKKNHRVFITCTSGFDRSPASVIAYLHWMTDTSLHAAYNFITSLHSCKPDRPAIAWATWDLIAMVENGRHDGPPTHAVTFIWNGQEGEDVNLVGDFTGNWKEPVKASHKGGPRYEVEMKLPQGKYYYKYITNGQWRHSTSSPAERDDRGNVNNVIVIGDTASVRPSVQPQKKVRCKYREGN | 559 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 47294927 | 47300341 | + | XM_039047123.1 | Bhi11g01646 | 50358 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi11g01646 | 559 | Gene3D | Protein tyrosine phosphatase superfamily | 282 | 544 | IPR029021 | - | |
Bhi11g01646 | 559 | CDD | DSP_laforin-like | 288 | 434 | IPR045204 | GO:0019203|GO:0046838 | |
Bhi11g01646 | 559 | Pfam | Glycogen recognition site of AMP-activated protein kinase | 456 | 537 | IPR032640 | - | |
Bhi11g01646 | 559 | PANTHER | PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC | 26 | 551 | - | - | |
Bhi11g01646 | 559 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 281 | 427 | IPR029021 | - | |
Bhi11g01646 | 559 | Gene3D | Immunoglobulins | 443 | 539 | IPR013783 | - | |
Bhi11g01646 | 559 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 289 | 448 | IPR020422 | GO:0006470|GO:0008138 | |
Bhi11g01646 | 559 | Pfam | Dual specificity phosphatase, catalytic domain | 298 | 421 | IPR000340 | GO:0008138|GO:0016311 | |
Bhi11g01646 | 559 | PANTHER | PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC | 26 | 551 | IPR030066 | GO:0005983 | |
Bhi11g01646 | 559 | CDD | E_set_AMPKbeta_like_N | 456 | 535 | - | - | |
Bhi11g01646 | 559 | SUPERFAMILY | E set domains | 453 | 536 | IPR014756 | - | |
Bhi11g01646 | 559 | ProSiteProfiles | PDZ domain profile. | 76 | 157 | IPR001478 | GO:0005515 | |
Bhi11g01646 | 559 | SUPERFAMILY | PDZ domain-like | 58 | 162 | IPR036034 | GO:0005515 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi07g00747 | Bhi-Chr7:27785187 | Bhi11g01646 | Bhi-Chr11:47294927 | 2.35E-29 | dispersed | |
Bhi11g01646 | Bhi-Chr11:47294927 | Bhi11g01648 | Bhi-Chr11:47295304 | 0 | dispersed | |
Bhi11g01646 | Bhi-Chr11:47294927 | Bhi11g01647 | Bhi-Chr11:47294930 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi11g01646 | - | - | csv:101214241 | 1054.66 |