Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01648 TGGAAGAATCTTCGTTCACTCGCTTAAGAAAGGGGGTAATGCTGAGAAGTCAAGAATAATCATGGTGGGAGACACTTTAAAGAAGGCAAGCGATTCATCAGGCGTCAAGCTCACTGAGACTAAAGACTTTGGTGATACACATATTTGGTTTCTTCAGGATGATGCTGAAGGAGAAGGCAGGATCTTTTAGCCTGGTTCTTGAAAGACCTTTTTCTCCTTTTCCTATTCAACAGCTTCTGCTTTCAAACGATTTAGATATTTTATTTAACAGAGGTCGAGTGCCTATTGCTACTTGGAAGAAAGAAGTTTTGGCATCAAATTTACAAACATCTGATGCAAGCAGTGGGAACTCTGGCTTTGCAACTTTCTCCTCTAAGTTCTCAACAGCACAAGGTTGGAAACTTCTTAACGATCAAATTGAAGATGTAAAATCACATATACAGAGAAACATTCTCACACCTCAAATCAGCCAACTTGTTGGTATATTTACTGAAGAGGAGCCTGGAGATGGAGAATGGGCTCATGGGAGCTTCCCCCTAGATGAATATGTCAAGGCATTAGAACGGTCTAAAGGGGAGCTATATTATGATCACTCTCGTGGTATGAGCTATAGTAAGATCACGGAGCAAATCTATGTGGGGTCATGTATACAGACTGAAGCAGACGTAGAGGCTTTGTCAAACAACGTGGGAGTCACCGCTGTACTGAATTTTCAAAGTGCAACTGAGGCAGAAAACTGGGGGATTAATTCCAAGTTAATCAATGAGTCGTGCCAAAAATGTGATATTCTAATGATCAGCTATCCTATCAGGGAAGGAGATTCTTATGATTTGAGGAAAAAACTACCATTCTGTGTGGGTCTACTTTTACGACTGTTAAAAAAGAACCATCGAGTTTTTATAACTTGTACCTCTGGTTTCGATCGATCTCCAGCAAGTGTGATTGCATATCTACACTGGATGACCGATACTTCTCTTCATGCAGCTTATAATTTTATCACCAGTTTGCATTCCTGCAAACCTGACAGGCCTGCGATTGCTTGGGCAACCTGGGATCTCATAGCAATGGTGGAAAATGGAAGGCATGATGGACCGCCCACTCATGCCGTTACCTTCATATGGAATGGTCAAGAGGGGGAGGATGTAAATTTGGTTGGAGATTTTACTGGTAACTGGAAAGAACCGGTAAAGGCTAGTCACAAGGGTGGGCCTAGATATGAAGTAGAAATGAAACTTCCTCAGGGGAAGTATTACTATAAGTACATCACAAATGGTCAGTGGAGGCACTCAACATCTTCACCTGCTGAAAGAGACGATAGGGGGAATGTCAACAATGTAATAGTCATCGGCGACACTGCCAGTGTTAGGCCTTCGGTTCAACCGCAAAAAAAAGATGCAAATATCGTGAAGGTAATTGAAAGACCGCTGACAGAAAATGAGCGATTCATGTTGGCGAAAGCGGCTCGTTGTGTTGCCTTTTCAGTATGTCCAATTAGATTAACTCCCAAGTAGTTTGGACATAGTCAATTTTTAAAATCCTTTATTTTGTGTCTTAGTTATAATCCTACATCTACATATAGAAAAATAAATATTTCCATGAAAATCCTCATTTGCTCTAGGTTTCTTGTACTTAATAGTTAATACATGCAACATTAACACTGTAATATATAGATAAACTATATGGAAGCTTCCTCTCTCTCTCTCTCTCTCA 1710 40.53 MMLKEKAGSFSLVLERPFSPFPIQQLLLSNDLDILFNRGRVPIATWKKEVLASNLQTSDASSGNSGFATFSSKFSTAQGWKLLNDQIEDVKSHIQRNILTPQISQLVGIFTEEEPGDGEWAHGSFPLDEYVKALERSKGELYYDHSRGMSYSKITEQIYVGSCIQTEADVEALSNNVGVTAVLNFQSATEAENWGINSKLINESCQKCDILMISYPIREGDSYDLRKKLPFCVGLLLRLLKKNHRVFITCTSGFDRSPASVIAYLHWMTDTSLHAAYNFITSLHSCKPDRPAIAWATWDLIAMVENGRHDGPPTHAVTFIWNGQEGEDVNLVGDFTGNWKEPVKASHKGGPRYEVEMKLPQGKYYYKYITNGQWRHSTSSPAERDDRGNVNNVIVIGDTASVRPSVQPQKKDANIVKVIERPLTENERFMLAKAARCVAFSVCPIRLTPK 450
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 47295304 47300341 + XM_039047124.1 Bhi11g01648 50360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01648 450 CDD E_set_AMPKbeta_like_N 317 396 - -
Bhi11g01648 450 Pfam Glycogen recognition site of AMP-activated protein kinase 317 398 IPR032640 -
Bhi11g01648 450 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 1 449 IPR030066 GO:0005983
Bhi11g01648 450 Gene3D Protein tyrosine phosphatase superfamily 143 409 IPR029021 -
Bhi11g01648 450 CDD DSP_laforin-like 149 295 IPR045204 GO:0019203|GO:0046838
Bhi11g01648 450 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 1 449 - -
Bhi11g01648 450 Gene3D Immunoglobulins 304 400 IPR013783 -
Bhi11g01648 450 Pfam Dual specificity phosphatase, catalytic domain 159 282 IPR000340 GO:0008138|GO:0016311
Bhi11g01648 450 ProSiteProfiles Dual specificity protein phosphatase domain profile. 150 309 IPR020422 GO:0006470|GO:0008138
Bhi11g01648 450 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 142 288 IPR029021 -
Bhi11g01648 450 SUPERFAMILY E set domains 314 397 IPR014756 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g01646 Bhi-Chr11:47294927 Bhi11g01648 Bhi-Chr11:47295304 0 dispersed
Bhi11g01648 Bhi-Chr11:47295304 Bhi03g00680 Bhi-Chr3:12938450 6.10E-06 dispersed
Bhi11g01647 Bhi-Chr11:47294930 Bhi11g01648 Bhi-Chr11:47295304 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01648 - - csv:101214241 892.108