Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01661 TCAATTGGACCTTTAGATAGCGAAAAGCACCTGAAAAGCGATCGGTTGGACAAAGAAAAGAAACAAAGTTGAGAGCCCTCGCCGGAAGTCGAATCTCCGGCCGCCGCTGTTTCCTATTTCCGATCGAACTGCCGTTCTTCTGGCTGTCTATTGCCGGAACTCCTATCTCCAAGAACCGATTCTCATCGGAAAGCAGTGAAACAAAAATTAGAAGGCATGGTGGGATTTTTTGCGATTCCGCTGGAGATTTCCGCTAGGTTACTGTGGACTACCAGCTTCTTCCGCCATAAGCGATCTTGATCCTCAATTTTTTTCTTTCTTTCTCTCTTTCCTTCTTGAGATTACTGTTCTGTTTTAGGTTAGTACTAAATCTTCGCCTTACACAAATTTGAAATTCCGTACAAATTTCACCTCTGCGCCGCCGTAATTGGAGTGAGATTTGAATGGAATCTGGTCGGTTCTTGTTTAATCCGCCGCCTGCCGGTGGCAATATGCTTTACCTTGGCGGAGCCGGTGGCGATCCTCTGCGAGGAGGAAGAACAATGATGAGCATGAACATGAATGTGAGTCCAAAGGGGAGGCCATTTTTCAGATCACTTGACGATCTATACGACGATGAATATTACGACGAGTTATACCCCGAGAAGAAGCGTCGTCTCACCCACGAACAGGTTCAAATGCTGGAGAAGAACTTTGAAGAAGAGAACAAACTGGAACCAGAGAGGAAGTCCCAACTAGCCAAGAAGCTAGGCCTGCAACCGAGGCAGGTCGCTGTGTGGTTCCAGAATCGTCGTGCTCGATGGAAGACGAAGCAGCTCGAAAGGGACTATGATGTTCTTAAAGCTTCATATGATTTGCTTTTGTCTAACTATGACTCAATAGTCAAAGAGAATGCAGTTCTTAAATCTGAGGTGGCTTCCTTAACTGAGAAATGTCTAGCCAAAGAACTGGATGGAGGAGAAGCACCAATTCCATATGTAACATCAGAGCTTCTTCTAGCAGACGTCGCCCATGTCTCCACCCCACACTCCGGCAGAAAGGCTGAAGATCGTCTCAGTTCAGGGAGTGATAGCAGTGCAGTGGTCGACGATAATTGTCCACAACTCATCGACAGCGGTGATTCTTACTTCCCTAGCAATGAGTATCCCCAATTGCCTAGCGGTTTGCAAATTGAACACGATGATACGAACGACAACAGCAACTACTTGTTCTCAGATATGTTTGCAGCAACAAACCAACAGAATCAGGAGGAAGGGCCTCCAGCTTGGTGGGCATGGCCTTAAGGTTGTTATTCAACTTATAACAGCCTGTTGCTTATACAAAATGTTATTGAAGCTTTTACTTGTTTGTAATCAATGAAGTTTAGATAATTATGGTGTCATTGTTTAAAGTATTGTTGTATTGTACTTGAAAGAAAAATGGACTTGACAATTTGAAGCCTGTGTTCACAATTAATCATAGAAGTGGAAAGAAGTTTGTCTCCATTCCACTA 1492 44.3 MESGRFLFNPPPAGGNMLYLGGAGGDPLRGGRTMMSMNMNVSPKGRPFFRSLDDLYDDEYYDELYPEKKRRLTHEQVQMLEKNFEEENKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKASYDLLLSNYDSIVKENAVLKSEVASLTEKCLAKELDGGEAPIPYVTSELLLADVAHVSTPHSGRKAEDRLSSGSDSSAVVDDNCPQLIDSGDSYFPSNEYPQLPSGLQIEHDDTNDNSNYLFSDMFAATNQQNQEEGPPAWWAWP 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 47828121 47833054 + XM_039047392.1 Bhi11g01661 50373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01661 279 MobiDBLite consensus disorder prediction 195 216 - -
Bhi11g01661 279 CDD homeodomain 68 124 IPR001356 GO:0003677
Bhi11g01661 279 Gene3D - 63 129 - -
Bhi11g01661 279 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 234 IPR045224 GO:0003700
Bhi11g01661 279 SUPERFAMILY Homeodomain-like 64 125 IPR009057 -
Bhi11g01661 279 ProSitePatterns 'Homeobox' domain signature. 98 121 IPR017970 GO:0000981|GO:0006355
Bhi11g01661 279 Pfam Homeodomain 68 121 IPR001356 GO:0003677
Bhi11g01661 279 ProSiteProfiles 'Homeobox' domain profile. 63 123 IPR001356 GO:0003677
Bhi11g01661 279 Pfam Homeobox associated leucine zipper 123 163 IPR003106 GO:0006355|GO:0043565
Bhi11g01661 279 PRINTS Lambda-repressor HTH signature 94 103 IPR000047 GO:0003677
Bhi11g01661 279 PRINTS Lambda-repressor HTH signature 103 119 IPR000047 GO:0003677
Bhi11g01661 279 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT5 1 234 - -
Bhi11g01661 279 SMART HOX_1 66 127 IPR001356 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi06g00499 Bhi11g01661 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g00500 Bhi-Chr6:11282328 Bhi11g01661 Bhi-Chr11:47828121 4.26E-81 dispersed
Bhi06g00501 Bhi-Chr6:11282328 Bhi11g01661 Bhi-Chr11:47828121 4.26E-81 dispersed
Bhi08g01417 Bhi-Chr8:41915462 Bhi11g01661 Bhi-Chr11:47828121 2.99E-40 dispersed
Bhi08g01418 Bhi-Chr8:41915467 Bhi11g01661 Bhi-Chr11:47828121 1.04E-41 dispersed
Bhi11g01661 Bhi-Chr11:47828121 Bhi03g01160 Bhi-Chr3:23516004 2.20E-36 dispersed
Bhi11g01661 Bhi-Chr11:47828121 Bhi06g00499 Bhi-Chr6:11282328 7.00E-80 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2406 PF00046 Homeodomain 4.50E-18 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01661 K09338 - csv:101212142 463.766