Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01759 TGAGAAAAGGCCTGACCAGTCCAGTCAAACCCACAAGCTTTGACCGAAAAGGAGAAAATTCCACAGTCAAACTTCCATCTCAGCTTCGAAGAAAGTAGCTCAGCTCCACGAAACCTTAATTGCCAACAAAACAAAAATCACTCCTCTGTTCCTCTTCCCTCCTCCTTCTTTTCTGCTCCTCCTTTTTTTTTTTTCTGTTAATATAAATAAGCCTTCATTCTGTAACTTCTTTCCAACACACACCTTCCTTCTTCTTCCAGTGACTTCCTTTTTCCCAAAAAAGGAAAAGGAAAAGAAAATACTAACATGAATAACATAAACCAAACGATAAATACACTCTCTGGCGGATCTTCTGACAACAAAACCAATAATTTCGCTATGGAAGTTCCGAAATTCAAGTCTCTTCAACCTCCTCCATTTCCAATGTCTCCTTCTTCTTACCTTTCCTCTTTCTCTTCTGGTTTAAGCCCCACTGAGTTTCTTAATTCCCCTCTCCTTTTCTCCTTCGGTGTTTTTCCTTCTCCTACCACTGGTGCCTTAAACTTGAGAAATGATTATGAGGAGATTGACCAGCAAGAAATGAAGGGAGATGTGAAAAATAATTACTCTGTTTCTTCGTTCAACCCACAAACAGGATCCTCTGTTTCGTCTTATTTTCAGTCCTCTTCTTCCAACGTGATCCAACTGAATCCAGGCGGTTTTTCGTGTGATGAAAATAGAGCGAAATCAGAATTTGTTACTACAGAAATGGTGGTAGCTGAATCAAAGCCAATTTCCCAGCTATCAATTTACAACAGAGAACAGCACAAATCAGAGAACGATGGATATAACTGGAGAAAATATGGTCAAAAACAAGTGAAAGGAAGCGAAAATCCACGAAGCTATTACAAGTGCACTTTTCCAAGTTGCCCAACAAAGAAGAAAGTTGAAAGATCTTTAGATGGGCAAATTACTGAGATTGTTTACAAGGGAAGCCATAATCACGCCAAGCCCCAGCCGACAAGACGTTCCGGTAACTCCGCTGTTTACGATCCATCGGCGGCGGATTCTGCCCTGCTGCAGGAGGATTCCTCCGTCTCGGTGGGGGACGAGGAATTCGAACCCAATTCGCCGTTTAGCAACTCGATGGACGACAATGAAAATGAACCGGAAGCTAAGAGATGGAAAGGGGAGAATGAAAATGAAGGATATTGTGGGGGTGGAAGCAGAACAGTGAAAGAGCCAAGAATTGTGGTTCAAACAACCAGCGAAATTGACATATTGCCGGATGGTTATAGATGGAGGAAATATGGACAAAAAGTTGTCAAAGGAAATCCAAATCCGAGGAGCTACTACAAATGCACATCTTTAGGCTGCCCGGTGAGGAAGCATATCGAGCGAGCGGCCAACGACATGAGGGCTGTGATCACCACCTACGAAGGCAAACACAACCATGAAGTTCCAGCAGCACGTGGCAGTGGTGGCGGTGGCTATAACGCCATCAACCGACCTATATCGACCAACATTCCAATGCCGGTGAGACCATCCGCCATCACCAGTAATTCTTTCACGGCAAATTTTCCTGCCGCGTTCCAGCCAGCAAATTTAGGGATGTCAGAAATAGGAGCAGAAGCATCATTGTTCCGATTTCAAACATCACAAGGACTGCCTCCAAGTTTCCAAGTTTCAGGATTTGGATCAGCAGCTAAGGAAGAAGCCAGAGATGATGACATATACTTCAATTCATTTCTATCTTAGAGTTTCTTTGTTTTTGTTTGTAGCATTGTAAAATTAGTAGGGGATGATGAGTAGAATAGAATAGATAATTGACTTGGAAGAGAGTGAATTTGTTGATTGGTTATTAGGTTAGAGATGAGTTTAGGAGATATGTGGGTTTGTTGTATCAATTAAATAATATAGTGGTTTAAATGACTGAGAAGTTTACACA 1927 42.03 MNNINQTINTLSGGSSDNKTNNFAMEVPKFKSLQPPPFPMSPSSYLSSFSSGLSPTEFLNSPLLFSFGVFPSPTTGALNLRNDYEEIDQQEMKGDVKNNYSVSSFNPQTGSSVSSYFQSSSSNVIQLNPGGFSCDENRAKSEFVTTEMVVAESKPISQLSIYNREQHKSENDGYNWRKYGQKQVKGSENPRSYYKCTFPSCPTKKKVERSLDGQITEIVYKGSHNHAKPQPTRRSGNSAVYDPSAADSALLQEDSSVSVGDEEFEPNSPFSNSMDDNENEPEAKRWKGENENEGYCGGGSRTVKEPRIVVQTTSEIDILPDGYRWRKYGQKVVKGNPNPRSYYKCTSLGCPVRKHIERAANDMRAVITTYEGKHNHEVPAARGSGGGGYNAINRPISTNIPMPVRPSAITSNSFTANFPAAFQPANLGMSEIGAEASLFRFQTSQGLPPSFQVSGFGSAAKEEARDDDIYFNSFLS 476
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 49879293 49882418 - XM_039047966.1 Bhi11g01759 50471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01759 476 ProSiteProfiles WRKY domain profile. 171 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi11g01759 476 Pfam WRKY DNA -binding domain 171 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi11g01759 476 Pfam WRKY DNA -binding domain 321 377 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi11g01759 476 SUPERFAMILY WRKY DNA-binding domain 166 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi11g01759 476 Gene3D WRKY domain 156 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi11g01759 476 SMART WRKY_cls 319 378 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi11g01759 476 SMART WRKY_cls 170 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi11g01759 476 Gene3D WRKY domain 306 372 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi11g01759 476 SUPERFAMILY WRKY DNA-binding domain 311 379 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi11g01759 476 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 19 434 IPR044810 GO:0003700
Bhi11g01759 476 MobiDBLite consensus disorder prediction 249 276 - -
Bhi11g01759 476 MobiDBLite consensus disorder prediction 277 291 - -
Bhi11g01759 476 MobiDBLite consensus disorder prediction 220 300 - -
Bhi11g01759 476 MobiDBLite consensus disorder prediction 1 22 - -
Bhi11g01759 476 ProSiteProfiles WRKY domain profile. 314 379 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi11g01759 476 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 19 434 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g00392 Bhi-Chr8:14951683 Bhi11g01759 Bhi-Chr11:49879293 1.81E-116 dispersed
Bhi11g01759 Bhi-Chr11:49879293 Bhi11g00404 Bhi-Chr11:9687859 4.45E-15 dispersed
Bhi11g01759 Bhi-Chr11:49879293 Bhi06g00364 Bhi-Chr6:7936850 7.18E-78 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2423 PF03106 WRKY 9.60E-25 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01759 K13424 - csv:101205651 763.837