Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01838 TATAATAATTGAAAAAAAGAAGAAAAAACAAAATAAATAAAAGGAAAATGAATGGTAAACGATTCCCATCATATATATATATATATATATATATATATATAAAGGAAAAAGAAAAAGAAAAAGAAAAACAGAAGGGTTCCATTTCACAGAGCTTGATTGGGTTGGTGTGTGTTGATGGATTTTGAACCAGGAACGTCGATCTTGCAAAACGGCGCCGTCAAGGGCTCGCTAAGGCACGCTCGGACGGCTCATAACATGTCGTCGTCGTCGCTGCGTAAAAAGTCCGATTTGACCCTCGTCCCCAAGGTACGATTCGGTTGCCTCAGGCAGTTGCTTGTAAATCTTCAGGAGGTCATTTTTGGAACAAGGATTTGGATTCTTTTTCCGGCGGTGCCGTTGGCTGTTTTGGCTGACTCGTTCGGCTTCCCGAGACCGTGGGTTTTCGTTCTAAGCTTACTGGGCCTTGCTCCACTTGCTGAACGCCTCAGCTTTCTCACCGAACAAATCTCATACTTCACCGGCCATACAGTTGGTGGGTTGCTAAATGCGACATGTGGCAATGCCACGGAGCTAATCGTAGCAGTATTTGCACTAAGCAAGGATAAGATTAAGTTGGTGAAGTATTCTCTTTTGGGATCCGTTCTCTCAAACCTCCTTCTTGTTCTTGGAACCTCACTCTTCTTTGGTGGCATCGTCAATCTTAAGAAAGAACAAACCTACGACGGAAGACAAGCTGAAGTGAACTCGCACATGCTGTTGTTGGCGCTTTTGTGCCACTCTCTCCCGATGTTGTTCCCTTACGCTGGAGGATCGGCTGACGTGGCCGAAGGTAGTGTGCTGCGATTGTCTAGAGCTGGTAGTATAATAATGTTGCTGGCTTATGTCGCTTACTTGATCTTTCACCTCTGGAATCATCGCCGATTATTTGAAGAAGACAAGGAACTTGACGAATACGACGACGTTGTGGAAGAAGGTCCAGTGATAGGAAAATGGAGCGCAATGGCGTGGTTGGTGGTTGTTACCCTTCTCATTGCTTTGTTGTCTGAGTACGTGGTGACTACGATTGAGGATGCATCAGAAACTTGGGGTTTATCTGTTGCGTTCCTTAGCATAATCTTGCTACCAATGATTGGAAATGCAGCCGAGCATGCAGGAGCTGTCATTTTTGCTTACAAGAACAAGTTGGATATAACTTTAGGTGTTGCTTTAGGATCTGCAACTCAAATAGCAATGTTTGTGGTTCCTTTATGTGTAATTGTTGCTTGGGTTATGGGAATGAATATGGATCTTAATTTTAATATCCTCGAAACTGCCTCTCTTGCTCTTTCAATATTGGCTTCCTCATCCATTTTACAGATGAGGTTACTCTCAACAATTTTGGGTTGTCGAGATCCAACTAAAGTGACAATAGTAATTTTCAATATATTCCAAGGTTGGTATTTTCATAAAAATATTTTGTTTGGTCTTGGTGATTATCTCAAGTGAATGTAGTATATAGATGCATTTTGTATCTATTCTTTTTAAATAA 1528 41.75 MDFEPGTSILQNGAVKGSLRHARTAHNMSSSSLRKKSDLTLVPKVRFGCLRQLLVNLQEVIFGTRIWILFPAVPLAVLADSFGFPRPWVFVLSLLGLAPLAERLSFLTEQISYFTGHTVGGLLNATCGNATELIVAVFALSKDKIKLVKYSLLGSVLSNLLLVLGTSLFFGGIVNLKKEQTYDGRQAEVNSHMLLLALLCHSLPMLFPYAGGSADVAEGSVLRLSRAGSIIMLLAYVAYLIFHLWNHRRLFEEDKELDEYDDVVEEGPVIGKWSAMAWLVVVTLLIALLSEYVVTTIEDASETWGLSVAFLSIILLPMIGNAAEHAGAVIFAYKNKLDITLGVALGSATQIAMFVVPLCVIVAWVMGMNMDLNFNILETASLALSILASSSILQMRLLSTILGCRDPTKVTIVIFNIFQGWYFHKNILFGLGDYLK 436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 52627884 52645008 + XM_039048846.1 Bhi11g01838 50550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01838 436 Pfam Sodium/calcium exchanger protein 88 244 IPR004837 GO:0016021|GO:0055085
Bhi11g01838 436 Pfam Sodium/calcium exchanger protein 276 407 IPR004837 GO:0016021|GO:0055085
Bhi11g01838 436 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 18 397 IPR004713 GO:0006812|GO:0008324|GO:0016021
Bhi11g01838 436 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 18 397 - -
Bhi11g01838 436 Gene3D - 263 419 IPR044880 -
Bhi11g01838 436 Gene3D - 116 254 IPR044880 -
Bhi11g01838 436 TIGRFAM caca2: calcium/proton exchanger 52 393 - -
Bhi11g01838 436 TIGRFAM cax: calcium/proton exchanger 71 392 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g01838 Bhi-Chr11:52627884 Bhi11g01840 Bhi-Chr11:52627888 0 dispersed
Bhi11g01838 Bhi-Chr11:52627884 Bhi11g01839 Bhi-Chr11:52627887 0 tandem
Bhi11g01838 Bhi-Chr11:52627884 Bhi03g02143 Bhi-Chr3:46316948 1.11E-176 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01838 K07300 - csv:101213176 612.068