Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01840 ATAATTGAAAAAAAGAAGAAAAAACAAAATAAATAAAAGGAAAATGAATGGTAAACGATTCCCATCATATATATATATATATATATATATATATATAAAGGAAAAAGAAAAAGAAAAAGAAAAACAGAAGGGTTCCATTTCACAGAGCTTGATTGGGTTGGTGTGTGTTGATGGATTTTGAACCAGGAACGTCGATCTTGCAAAACGGCGCCGTCAAGGGCTCGCTAAGGCACGCTCGGACGGCTCATAACATGTCGTCGTCGTCGCTGCGTAAAAAGTCCGATTTGACCCTCGTCCCCAAGGTACGATTCGGTTGCCTCAGGCAGTTGCTTGTAAATCTTCAGGAGGTCATTTTTGGAACAAGGATTTGGATTCTTTTTCCGGCGGTGCCGTTGGCTGTTTTGGCTGACTCGTTCGGCTTCCCGAGACCGTGGGTTTTCGTTCTAAGCTTACTGGGCCTTGCTCCACTTGCTGAACGCCTCAGCTTTCTCACCGAACAAATCTCATACTTCACCGGCCATACAGTTGGTGGGTTGCTAAATGCGACATGTGGCAATGCCACGGAGCTAATCGTAGCAGTATTTGCACTAAGCAAGGATAAGATTAAGTTGGTGAAGTATTCTCTTTTGGGATCCGTTCTCTCAAACCTCCTTCTTGTTCTTGGAACCTCACTCTTCTTTGGTGGCATCGTCAATCTTAAGAAAGAACAAACCTACGACGGAAGACAAGCTGAAGTGAACTCGCACATGCTGTTGTTGGCGCTTTTGTGCCACTCTCTCCCGATGTTGTTCCCTTACGCTGGAGGATCGGCTGACGTGGCCGAAGGTAGTGTGCTGCGATTGTCTAGAGCTGGTAGTATAATAATGTTGCTGGCTTATGTCGCTTACTTGATCTTTCACCTCTGGAATCATCGCCGATTATTTGAAGAAGACAAGGAACTTGACGAATACGACGACGTTGTGGAAGAAGGTCCAGTGATAGGAAAATGGAGCGCAATGGCGTGGTTGGTGGTTGTTACCCTTCTCATTGCTTTGTTGTCTGAGTACGTGGTGACTACGATTGAGGATGCATCAGAAACTTGGGGTTTATCTGTTGCGTTCCTTAGCATAATCTTGCTACCAATGATTGGAAATGCAGCCGAGCATGCAGGAGCTGTCATTTTTGCTTACAAGAACAAGTTGGATATAACTTTAGGTGTTGCTTTAGGATCTGCAACTCAAATAGCAATGTTTGTGGTTCCTTTATGTGTAATTGTTGCTTGGGTTATGGGAATGAATATGGATCTTAATTTTAATATCCTCGAAACTGCCTCTCTTGCTCTTTCAATATTGGCTTCCTCATCCATTTTACAGGATGGCACTTCTCACTATATGAAGGGATTGATTCTCCTCCTCTTCTATATTGTTATTGCAACATGTTTCTTCTTAACTAATGATGAGGTTACTCTCAACAATTTTGGGTTGTCGAGATCCAACTAAAGTGACAATAGTAATTTTCAATATATTCCAAGGTTGGTATTTTCATAAAAATATTTTGTTTGGTCTTGGTGATTATCTCAAGTGAATGTAGTATATAGATGCATTTTGTATCTATTCTTTTTAAATAA 1606 41.53 MDFEPGTSILQNGAVKGSLRHARTAHNMSSSSLRKKSDLTLVPKVRFGCLRQLLVNLQEVIFGTRIWILFPAVPLAVLADSFGFPRPWVFVLSLLGLAPLAERLSFLTEQISYFTGHTVGGLLNATCGNATELIVAVFALSKDKIKLVKYSLLGSVLSNLLLVLGTSLFFGGIVNLKKEQTYDGRQAEVNSHMLLLALLCHSLPMLFPYAGGSADVAEGSVLRLSRAGSIIMLLAYVAYLIFHLWNHRRLFEEDKELDEYDDVVEEGPVIGKWSAMAWLVVVTLLIALLSEYVVTTIEDASETWGLSVAFLSIILLPMIGNAAEHAGAVIFAYKNKLDITLGVALGSATQIAMFVVPLCVIVAWVMGMNMDLNFNILETASLALSILASSSILQDGTSHYMKGLILLLFYIVIATCFFLTNDEVTLNNFGLSRSN 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 52627888 52645008 + XM_039048847.1 Bhi11g01840 50552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01840 435 Gene3D - 263 419 IPR044880 -
Bhi11g01840 435 Gene3D - 116 254 IPR044880 -
Bhi11g01840 435 TIGRFAM cax: calcium/proton exchanger 71 418 IPR004798 GO:0006816|GO:0015369
Bhi11g01840 435 Pfam Sodium/calcium exchanger protein 276 416 IPR004837 GO:0016021|GO:0055085
Bhi11g01840 435 Pfam Sodium/calcium exchanger protein 88 244 IPR004837 GO:0016021|GO:0055085
Bhi11g01840 435 TIGRFAM caca2: calcium/proton exchanger 52 418 - -
Bhi11g01840 435 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 18 429 - -
Bhi11g01840 435 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 18 429 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g01838 Bhi-Chr11:52627884 Bhi11g01840 Bhi-Chr11:52627888 0 dispersed
Bhi11g01839 Bhi-Chr11:52627887 Bhi11g01840 Bhi-Chr11:52627888 0 tandem
Bhi11g01840 Bhi-Chr11:52627888 Bhi11g01841 Bhi-Chr11:52627891 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01840 K07300 - csv:101213176 672.159