Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01849 GGCAAAGATAAGGCCCTGAGGCCTGAAACCTTTTTCCTCATCAGATGGATACGCTTTCTTCATCCAACGGCCACAATTATCCCCACCGATTAAACTCCCCAAACAGCAATCAAATTCCCCTCTCAACTCTATATAACACCTCCAAATTCCAACCACCGTTACAACCACCTACCATCTCTCCACCATGGCCGCCGCCGCATCCTCCTTCATCGGAACTCGTCTTCCCGTTGCCCCAGCCGGCTCGGGTAGGGTACAAGCCAGATTCTCATTCGGCAAACAAAAAAGCCCACCAAAGAAATCGTCAAAAAAGCCCGTTTCGGATCGGCCGCTGTGGTTCCCGGGGGCCGTGGCGCCGGAGTGGCTGGACGGGAGCTTGGTGGGGGATTATGGATTCGACCCATTTGGGCTGGGCAAACCGGCGGAGTACTTGCAGTTCGACTTGGACTCATTGGACCAGAACTTGGCTAAGAATGTGGCTGGTGATGTGATTGGTACTCGGTTCGAGAATGCGGATGTGAAATCGACACCGTTCCAGCCGTACAGTGAGGTGTTTGGGTTGCAGAGGTTTCGGGAGTGTGAGCTGATCCATGGAAGGTGGGCTATGTTGGCTACACTTGGTGCCCTCACTGTTGAGTGGCTCACCGGCGTCACTTGGCAAGATGCCGGAAAGGTAGAACTGGTGGAAGGATCCTCATATCTTGGACAGCCACTTCCATTCTCTATATCAACATTGATATGGATAGAAGTTCTGGTAATTGGGTACATTGAGTTTCAAAGAAACGGTGAGCTTGATCCAGAGAAGAGACTTTACCCGGGGGGCAAGTACTTTGATCCTCTTGGCTTAGCTGCCGATCCCGAGAAGAAGGTGACGCTACAACTGGCTGAGATCAAGCACGCTCGCCTCGCCATGGTTGCGTTTCTCGGTTTTGCCGTTCAAGCTGCTGCCACTGGCAAAGGCCCCCTCAATAACTGGGCAACCCATCTGAGTGACCCTCTCCACACTACCATTATTGACACACTCTTCTATTCATCTTGAAATGGTTGAGTTCTTTGTTCTAGCTCTGGTTTGTAATTTATATTTTTAGAGGGCAAAATTGCAATTCTCTTCCTGTCATATCATGTAAATTATTATATCTGAACCGTCTGTCAAAGGATCGATGGGGTGGGTTGGAGAAGATTTACAGATAGTAATACATAAATACATATTCCTTCGATTGAGATA 1222 49.35 MAAAASSFIGTRLPVAPAGSGRVQARFSFGKQKSPPKKSSKKPVSDRPLWFPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNGELDPEKRLYPGGKYFDPLGLAADPEKKVTLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTLFYSS 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 52691166 52693044 + XM_039048113.1 Bhi11g01849 50561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01849 283 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 278 IPR001344 GO:0009765|GO:0016020
Bhi11g01849 283 Gene3D Chlorophyll a/b binding protein domain 50 282 - -
Bhi11g01849 283 Pfam Chlorophyll A-B binding protein 56 252 IPR022796 -
Bhi11g01849 283 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.2, CHLOROPLASTIC 2 278 - -
Bhi11g01849 283 SUPERFAMILY Chlorophyll a-b binding protein 43 279 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02124 Bhi-Chr3:45980618 Bhi11g01849 Bhi-Chr11:52691166 1.64E-178 dispersed
Bhi06g00641 Bhi-Chr6:14959364 Bhi11g01849 Bhi-Chr11:52691166 3.55E-48 dispersed
Bhi11g01849 Bhi-Chr11:52691166 Bhi06g00098 Bhi-Chr6:2711474 6.95E-35 dispersed
Bhi11g01849 Bhi-Chr11:52691166 Bhi08g01147 Bhi-Chr8:36268098 9.01E-31 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01849 K08915 - egr:104426378 499.59