Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01856 ATGAGCTCCTGGAACGATTCCACACATTTTTGTAATTGGGTCGGTGTTACTTGTAATACTACTCTCAAAAGAATAGTGGCTTTGCGCTTAGAAGCTCGAAAATTGGTTGGTTTGTTACCTCCTTCACTGGGAAATCTTACTTATCTCAGGGCAATCAACTTGGGGGACAACCATTTTCATGGCCCAATTCCACAAGAGTTTGGTAAGCTACAACAATTGCGTTATCTGAATTTGTCCTTCAATAATTTTAGTGGAGAGATTCCAAGTAATATGAGTCATTGCATCGAACTTGTTGTTCTACAAATTGGTAACAATGAGCTTATAGGTCAGATTCCACACCAATTCTTCATGTTGACCAAGTTGGAACAACTACGATGTCAATCCAACCAGTTGACTGGAGATATCCCATCTTGGATAGGAAATTTGTCTTCCATATTTGATCTGTGTTTTCCATATAACCATTTTGAAGGAAAAATTCCCAGTGAAGTTGGACGTTTATCTAGATTGAAATTTTTTGCAGTTGATGCAAACTATTTGACAGGTACAGTACCACTTTCTTTGTTTAATATTACTTCTCTAACTCAATTGTCTCTCACCCAAAACAAATTCCACGGAAATTTACCACAAAATATTGGATCCACTCTTCCAAACCTGCAGTTCTTCTATGGCGGTATCAATTATTTTAGAGGCCCTATTCCCACGTCCTTTGTCAACGCCTCCCGCCTTCGGGTATTAGATATTTCTCAAAACAATATCACCGGAATGATACCGGATGGATTGGGGAGCTTAAGAGACTTGGAGTTACTCAATTTTGTTAACAACAAACTTGGAACTGGGAAAGTTGGTGATTTGAATTTCATCAATTCCTTGACTAATTGTACTAGTTTAAAGATTTTGGGTCTTGCTGTGAATCGTTTTGGAGGACCATTGCCTTCCTCCATCGCCAACCTTTCAACCCAACTCATATATCTACTTTTAAGTGGAAATATTCTTCCTTCTAATATTGGGAATCTTCAGAATTTGGAAGAGATATTGTTGCAAGGGAACGAATTAACTGGGCCAATTCCATCGTCCATTGGTAACTTATCTTCACTCAACAAGCTCAACATGAGCTATAACAAAGTTGAAGGAAGTATACCACCAAGTTTAGGACGATGCAGAAGCTTGCAAGTGCTTGACCTATCTCATAACAACCTAAGTGGCAACATACCAAAGGAAGTTATCGGCCTCTCTTCCCTTTCCATCTACTTGGGCTTGGGTCATAACTCGCTTAATGGTTCTTTGCCATCTGAAGTGGGTGAGCTAAATAATTTAGCACAATTAGATGTGTCGGAGAACATATTATCAGGTGAAATTCCTATCAACCTCGGTAAATGTACAAGCATGGAGCGCTTGGATCTTGGGGGTAACCAATTTGAGGGAACAATTCCACAATCTTTGGCAGCTTTGAAAGGCCTAGAGAAATTAAACCTCTCCAACAACAACTTGTCTGGGTTAATTCCTCAATTTCTTGGCAAGCTTCACTCACTCAAGTATCTCGATCTGTCCTATAATAACTTTGAGGGGCAACTGCCCAAAGGAGGAGTTTTTTCCAATTCAACCATGGTTTTTGTCTTTGGGAATAAAAATCTATGTGATGGTTTACCAGAATTACATTTACCTCCGTGCGCATCTAACCAAACACATTTGCACTCCAATAAGCCATTTCTAAAATCAAATGTATTAATTCCCACGGCATTTGCAATCACCTTTGTTGGTATTTTGGTGATCATCATTTTTGTGTGTTTCGTGCTTAAGAAGTCAAGGAAGGATGCTTCAACTAATTCTTCTTCTGCAAAGGAGTTTCTACCACAAATTTCTTACTTGGAACTCAATAAATCAACGGAAGGATTCTCTATAGACAATTTGATTGGTTCTGGTAGTTTTGCCTCTGTCTATAAAGGTGTTTTCTCGAATGATGGGTCTATAGTTGCCATTAAAGTTTTTAATCTCCAACAACAAGGTGCTTCCAAGAGTTTTATTGATGAATGCAATGCTCTCTCCAAAATACGACATCGGAATCTCCTCAAGATCATAACTTCTTGTTCAAGTATTGATGGACAAGGCAATGAATTTAAAGCTCTAGTCTTCAATTTTATGTCCAATGGAAATCTTGATGTATGGCTTCATCCAACAAATGATGGGACCAATAAAAAAAGGTTGAGTATCATCCAAAGATTGAACGTTACTATTGATATTGCATGTGGATTAGACTATCTACACAATTATTGTGAAACTCCTATCATTCATTGTGATCTAAACCCCAATAATATATTGCTCGACGATGATATGGTGGCTCATGTAGGAGACTTCGGGTTAGCTAGATTTATGTTGAAAGAATCAAATTATCATATATCCTTTAGTCAAATCATGTCACTTGCACTCAAGGGTTCTATAGGATATATCCCTCCAGAGTATGGTAGTGGTAGCAAAATTTCTATTGAAGGAGATGTCTTCAGCTACGGGATACTATTATTAGAGATGATCATCGGAAAAAGACCCACTCACAGCACGTTTGACAATGGTGTGGATATTCACTTGTTCATTGCAAGAGCACTACCTCATGATGCTTTGAAAATAATCGACCCTTCTATAGTATTTGAAGAAACATGCAGAGAAGAAGAGATCGAAGAGGAAATGCAAGAAATAGCAATAATGAGCTAACAAGATCTTAAAGAAATTATGCCAAGATGGATGGAAGAATGTCTAGTCTCAATAATGAGAATTGGTCTATCATGCTCCTTGAAGGAACCAAGAGAGAGAACACCGATGAATGTTGTCCTAAATGAATTGCAAGCAATTAGAAGTTCCTACCTCAGGTTTAAGAAGGAACGTCGAAAGTTTCATAGGCATTTGCTTCACCAAGCTTAAGAGGCAATAAATGAAACTTTATTATTTGGTCACAAGCAATAGGTTTCGGTTTGAATATCCACCTTTCAGACTAGCAGTTCCCAAAGGAGGGTGCAATAATGTTATTTAAATATAATAATAGTAAGACTCTTTAACTTAAA 3050 37.8 MSSWNDSTHFCNWVGVTCNTTLKRIVALRLEARKLVGLLPPSLGNLTYLRAINLGDNHFHGPIPQEFGKLQQLRYLNLSFNNFSGEIPSNMSHCIELVVLQIGNNELIGQIPHQFFMLTKLEQLRCQSNQLTGDIPSWIGNLSSIFDLCFPYNHFEGKIPSEVGRLSRLKFFAVDANYLTGTVPLSLFNITSLTQLSLTQNKFHGNLPQNIGSTLPNLQFFYGGINYFRGPIPTSFVNASRLRVLDISQNNITGMIPDGLGSLRDLELLNFVNNKLGTGKVGDLNFINSLTNCTSLKILGLAVNRFGGPLPSSIANLSTQLIYLLLSGNILPSNIGNLQNLEEILLQGNELTGPIPSSIGNLSSLNKLNMSYNKVEGSIPPSLGRCRSLQVLDLSHNNLSGNIPKEVIGLSSLSIYLGLGHNSLNGSLPSEVGELNNLAQLDVSENILSGEIPINLGKCTSMERLDLGGNQFEGTIPQSLAALKGLEKLNLSNNNLSGLIPQFLGKLHSLKYLDLSYNNFEGQLPKGGVFSNSTMVFVFGNKNLCDGLPELHLPPCASNQTHLHSNKPFLKSNVLIPTAFAITFVGILVIIIFVCFVLKKSRKDASTNSSSAKEFLPQISYLELNKSTEGFSIDNLIGSGSFASVYKGVFSNDGSIVAIKVFNLQQQGASKSFIDECNALSKIRHRNLLKIITSCSSIDGQGNEFKALVFNFMSNGNLDVWLHPTNDGTNKKRLSIIQRLNVTIDIACGLDYLHNYCETPIIHCDLNPNNILLDDDMVAHVGDFGLARFMLKESNYHISFSQIMSLALKGSIGYIPPEYGSGSKISIEGDVFSYGILLLEMIIGKRPTHSTFDNGVDIHLFIARALPHDALKIIDPSIVFEETCREEEIEEEMQEIAIMS 900
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 52878596 52881828 - XM_039048462.1 Bhi11g01856 50568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01856 900 Pfam Leucine rich repeat 340 399 IPR001611 GO:0005515
Bhi11g01856 900 Pfam Leucine rich repeat 461 520 IPR001611 GO:0005515
Bhi11g01856 900 Gene3D Transferase(Phosphotransferase) domain 1 713 899 - -
Bhi11g01856 900 SUPERFAMILY RNI-like 214 546 - -
Bhi11g01856 900 Pfam Leucine Rich Repeat 72 94 IPR001611 GO:0005515
Bhi11g01856 900 Pfam Leucine Rich Repeat 241 263 IPR001611 GO:0005515
Bhi11g01856 900 ProSiteProfiles Protein kinase domain profile. 631 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi11g01856 900 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE, PUTATIVE-RELATED 331 893 - -
Bhi11g01856 900 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE, PUTATIVE-RELATED 1 331 - -
Bhi11g01856 900 Pfam Leucine rich repeat N-terminal domain 2 19 IPR013210 -
Bhi11g01856 900 Gene3D Phosphorylase Kinase; domain 1 593 712 - -
Bhi11g01856 900 SUPERFAMILY Protein kinase-like (PK-like) 611 869 IPR011009 -
Bhi11g01856 900 Gene3D Ribonuclease Inhibitor 282 559 IPR032675 -
Bhi11g01856 900 SUPERFAMILY L domain-like 4 276 - -
Bhi11g01856 900 Gene3D Ribonuclease Inhibitor 103 214 IPR032675 -
Bhi11g01856 900 Pfam Protein kinase domain 633 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi11g01856 900 ProSitePatterns Protein kinases ATP-binding region signature. 637 660 IPR017441 GO:0005524
Bhi11g01856 900 SMART LRR_typ_2 362 386 IPR003591 -
Bhi11g01856 900 SMART LRR_typ_2 387 410 IPR003591 -
Bhi11g01856 900 SMART LRR_typ_2 507 532 IPR003591 -
Bhi11g01856 900 SMART LRR_typ_2 70 94 IPR003591 -
Bhi11g01856 900 SMART LRR_typ_2 118 142 IPR003591 -
Bhi11g01856 900 SMART LRR_typ_2 240 263 IPR003591 -
Bhi11g01856 900 SMART LRR_typ_2 483 506 IPR003591 -
Bhi11g01856 900 PRINTS Leucine-rich repeat signature 389 402 - -
Bhi11g01856 900 PRINTS Leucine-rich repeat signature 483 496 - -
Bhi11g01856 900 Gene3D Ribonuclease Inhibitor 1 96 IPR032675 -
Bhi11g01856 900 Gene3D Ribonuclease Inhibitor 217 281 IPR032675 -
Bhi11g01856 900 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 331 893 - -
Bhi11g01856 900 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1 331 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00264 Bhi-Chr3:5699334 Bhi11g01856 Bhi-Chr11:52878596 2.61E-08 dispersed
Bhi08g02164 Bhi-Chr8:61980909 Bhi11g01856 Bhi-Chr11:52878596 3.13E-10 dispersed
Bhi11g01856 Bhi-Chr11:52878596 Bhi11g01858 Bhi-Chr11:52937328 0 dispersed
Bhi11g01854 Bhi-Chr11:52817494 Bhi11g01856 Bhi-Chr11:52878596 2.09E-31 proximal
Bhi11g01855 Bhi-Chr11:52820828 Bhi11g01856 Bhi-Chr11:52878596 5.47E-75 tandem
Bhi11g01856 Bhi-Chr11:52878596 Bhi11g01857 Bhi-Chr11:52909207 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88419 PF00069 Pkinase 9.30E-38 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01856 - - cpep:111791563 1157.51