Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01860 ATAACTTCCTAAGAAAATTTGAACCTATAGCTACTGGGACCTACAATTCAATTGGGTTATCCTTGCAAGAAAGCTGATAGATTAGGTTTTGTTCATTATAGAACTGGTATTTCCCAGCAGGATGAGGCACAGTTGCTACGTTCCCAAGAAATTTCTTTGCAGTTTTTTATGTTATATATTTCTGATGTCCATGAACTCGGCTTTCAGGAATGCACCCACTTTTGGAAACGAATCAGATCGCTTGGCTCTACTTGACTTGAAAAGGAGAGTACTTAATGACCCACTCAAAATCATAAGCTCTTGGAACGATTCCATGCATTTTTGTGACTGGATCGGTGTTACTTGCAGTCCCACTATTAGAAGAGTAATGACGTTGAACTTGGAAGCTCGACAACTGACTGGTTCACTACCATCTTCATTAGGAAATCTTACTCATCTCACTGAAATCAGATTGGGAGACAACAACTTCCATGGCCCAATGCCCCAAGAGTTTGGTAAATTAATACGATTGCGCCATCTCAATTTATCCTTCAATAACTTTGACGGTGAAATTGCGGCGAATATAAGTCATTGTGTTGAGCTTCTTGTTTTGGAGCTGAGTCTTAATGAGTTTGTTGGTCAGATTCCACATCAGTTCTTCACGTTAAGCAAGTTGGAACGACTTGGGTTTGGCGGTAACAATCTAGTTGGAATCATCCCACCTTGGATGGGAAATTTTTCTTCACTATTTCGTTTGTCTTTTGCACTGAACGATTTTCATGGAAGTATTCCTAGTGAACTAGGACACCTATCTAGATTGAAACTCTTCACAGTTTATGGAAACTATTTGACGGGTATAGTGCCGCCATCGATCTATAATATAACTTCTCTTACTTACTTTTCTCTTACTCAAAATCGACTCCAAGGAACTCTGCCGTCAGATGTGGGATTTACTCTCCCCAATCTTGAGGTCTTTGCTGGTGGTGTCAATAATTTTGGAGGGCCTATTCCGATATCCTTGGCTAATATCTCCGGTCTCCAGGTCGTAGATTTTGCTGAGAACAGTCTTATTGGAACTCTTCCTCATGACTTGGGGAACTTAAAAGAATTGGTGAGGTTCAATTTTGATGACAACAGACTTGGAAGTGGGAAAGCTGATGACTTAAATTTAATCAGGTCTCTGACTAATTGTACTAGTCTACGCGTTTTGGGTCTTGCTGGGAATCACTTTGGAGGTACATTGCCTCTATCTATTAGCAACCTTTCAAACCAGCTGACAATATTAACCTTGGGTAGCAATTTGTTAAGTGGAGGCATTCCTGTGGGGATTGGAAACTTGATTAACTTACAAGTTCTTGGAGTAGAAGGGAACAATTTGAATGGTAGTGTCCCTTCCAATATTGGGAAGCTTCGTCAGTTGTCTGTTCTTAATTTGAATAATAACATGTTAACTGGGACAATTCCATCCTCCATTGGTAACTTATCTTCAGTGACCAAGCTTTTCATGGAGGATAATAGACTAGAGGGAATTATACCACCAAGCTTGGGACAATGCAAAAGGCTCCAAGCTCTTGACCTATCTGGTAACAACCTAAGTGGGACCATACCAAAAGAAGTTCTCAGTCTCTCTTCCCTTTCAATCTATTTGGCCTTAAATCACAACACACTTACTGGACCATTGCCACATGAAGTTGGTGATTTAGTTAGTTTAACACTGTTAGATGTATCACAGAATAAATTATCAGGTGATATTCCCAGTACCCTTGGTAAATGTATTGGCATGGTACAGTTGTATTTGGGAGGTAACCAATTTGAGGGAATGATTCCTCAGTCTTTGAAAGCTTTGAAAGGTCTAGAAGAACTAAATCTTTCAAGTAACAACTTCTCTGGGTCAATTCCTCAATTTCTTGACAATCTTTTTTCACTTAAATTTCTTGACCTATCCTATAATAATTTCGAGGGAAAAGTGCCCAAAGAAGGAATTTTTTCAAATTCAACCATGTTTTCTATACTTGGAAACAATAATCTATGTGATGGTTTGCAGGAATTACATCTACCTTCGTGCACATCTAACAGAACACATTTGTCCAACAAGCTCCTAACACCAAAAGTGTTAATTCCGTTGGTATCTACTCTCACATTCCTAGTTATTCTTTTGAGCATCCTATCTGTATATTTTATGCTGATAAAGTCAAGGGAAAATGTTTTATCTTCAGCTGGATCTGTGGATTTATTATCACAAATTTCTTACTTAGAGCTCAATAGATCAACAAATGGGTTTTCTATAGACAATTTGATTGGTTCGGGTAGTTTTGGTTCAGTGTATAAAGGTACTCTTTTGAATGATAAATCAGTTGTTGCTGTTAAGGTTCTTAACCTTCAACAACATGGTGCTTCCAAGAGTTTTGTTGATGAATGCAAAGCTCTCGCAAGCATACGACATCGAAATCTCCTTAAGATCGTAACTTCTTGCTCAAGTACAGATGAAAAAGGTAATGAGTTCAAAGCTATAGTATTTGACTTCATGTCCAATGGAAATCTGGACGGTTGGCTTTACCCTACACATATTGAGGAGAATAAAAGAAAATTGAGCTTTATTCAGAGATTGAACATTGCTATTGATGTTGCCAATGCATTAGATTATCTCCACAATCAATGTGAAACACCTATCGTTCATTGTGATCTAAAGCCTAGCAATGTGTTGTTGGATGATGATATGGTAGCCCATGTTGGGGACTTCGGGTTAGCTAGATTCATCCTTGAAAGATCAGATCAATCTTCTTTTAGACAAACCATGTCAATTGCGCTCAAGGGTTCTATTGGATATATTCCCCCAGAGTACGGAACTGGTGGCAACATTTCCGTTGAAGGAGATATCTTTAGCTTTGGGATTCTACTATTGGAAACATTCATTGGAAGACGGCCCACTGACAACTTGTTTGGCGATGGCGTGGATATTCATCTATTCACAGCAATGGCATTGCCTCATGGTGTCTTGGACATAATTGATCCTTTTTTGCTATCTGAAGTCTCATGCCAACAAGAAGAAGAGAATGAAGAAAAAATACAAACAGTAGCAATTATGAGCGGGGAAGATCGTAGAGAAATTGAGCAAAGAAGGATGGAAGAATACCTAGTCTCAGTAATGAGAATTGGGCTGTCATGCTCCTTAACAACACCTAGAGAAAGGATGTCCATGAATATAGTTGTTAACAAGTTGCAAACAATTAAAAGCTCCTATCTCAAGTAGAAGAAAACAAGCTAATATTGTCCAACAAGATTTTCAAGAACTTGCAGTATTGCTTAACCATTTTGGTTACATCTTGACATGTATGGTGAGAATAAATCTTGGAGGAATCAAAGTAAGGTATGTTGTTTCATCTACAAAAAATCAGTTTGTTCAAGTGATGAGTTATGAAGAAATATTATTCTGACTAAAGTAGAAAGAATATTGCTTATTTCAATTGTACAAAATATTATGTACCAAGGTAAATTTTTTTAGGAGATATTAGTGGATAGGATTGAATAAAAGAAAAAAAAAAATCTTCATAGCTTCTTTATATTAATTTTATCATGTCTATTACTTTATATTAATTCGGGTGCACCTACTGATCCGATGTTTTTATAATTGTGTTTCTTTTGCTCTTTTGATTCATTGTAATTTGAGGAATAGCCTCTTTTCATTACGAAAAATTATGTTTTAAAATAATAATGTTTATAACTTTATAGTTTTAACTAATGTTATTTATCATTTTCATTTGA 3741 36.92 MRHSCYVPKKFLCSFLCYIFLMSMNSAFRNAPTFGNESDRLALLDLKRRVLNDPLKIISSWNDSMHFCDWIGVTCSPTIRRVMTLNLEARQLTGSLPSSLGNLTHLTEIRLGDNNFHGPMPQEFGKLIRLRHLNLSFNNFDGEIAANISHCVELLVLELSLNEFVGQIPHQFFTLSKLERLGFGGNNLVGIIPPWMGNFSSLFRLSFALNDFHGSIPSELGHLSRLKLFTVYGNYLTGIVPPSIYNITSLTYFSLTQNRLQGTLPSDVGFTLPNLEVFAGGVNNFGGPIPISLANISGLQVVDFAENSLIGTLPHDLGNLKELVRFNFDDNRLGSGKADDLNLIRSLTNCTSLRVLGLAGNHFGGTLPLSISNLSNQLTILTLGSNLLSGGIPVGIGNLINLQVLGVEGNNLNGSVPSNIGKLRQLSVLNLNNNMLTGTIPSSIGNLSSVTKLFMEDNRLEGIIPPSLGQCKRLQALDLSGNNLSGTIPKEVLSLSSLSIYLALNHNTLTGPLPHEVGDLVSLTLLDVSQNKLSGDIPSTLGKCIGMVQLYLGGNQFEGMIPQSLKALKGLEELNLSSNNFSGSIPQFLDNLFSLKFLDLSYNNFEGKVPKEGIFSNSTMFSILGNNNLCDGLQELHLPSCTSNRTHLSNKLLTPKVLIPLVSTLTFLVILLSILSVYFMLIKSRENVLSSAGSVDLLSQISYLELNRSTNGFSIDNLIGSGSFGSVYKGTLLNDKSVVAVKVLNLQQHGASKSFVDECKALASIRHRNLLKIVTSCSSTDEKGNEFKAIVFDFMSNGNLDGWLYPTHIEENKRKLSFIQRLNIAIDVANALDYLHNQCETPIVHCDLKPSNVLLDDDMVAHVGDFGLARFILERSDQSSFRQTMSIALKGSIGYIPPEYGTGGNISVEGDIFSFGILLLETFIGRRPTDNLFGDGVDIHLFTAMALPHGVLDIIDPFLLSEVSCQQEEENEEKIQTVAIMSGEDRREIEQRRMEEYLVSVMRIGLSCSLTTPRERMSMNIVVNKLQTIKSSYLK 1035
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 52985620 52989536 - XM_039049143.1 Bhi11g01860 50572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01860 1035 Pfam Leucine rich repeat 549 605 IPR001611 GO:0005515
Bhi11g01860 1035 Pfam Leucine rich repeat 424 484 IPR001611 GO:0005515
Bhi11g01860 1035 Gene3D Transferase(Phosphotransferase) domain 1 795 1034 - -
Bhi11g01860 1035 SMART serkin_6 713 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi11g01860 1035 SUPERFAMILY Protein kinase-like (PK-like) 689 1026 IPR011009 -
Bhi11g01860 1035 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Bhi11g01860 1035 SMART LRR_typ_2 103 126 IPR003591 -
Bhi11g01860 1035 SMART LRR_typ_2 471 495 IPR003591 -
Bhi11g01860 1035 SMART LRR_typ_2 175 199 IPR003591 -
Bhi11g01860 1035 SMART LRR_typ_2 127 151 IPR003591 -
Bhi11g01860 1035 SMART LRR_typ_2 592 617 IPR003591 -
Bhi11g01860 1035 SMART LRR_typ_2 399 422 IPR003591 -
Bhi11g01860 1035 SMART LRR_typ_2 423 447 IPR003591 -
Bhi11g01860 1035 SMART LRR_typ_2 568 591 IPR003591 -
Bhi11g01860 1035 SMART LRR_typ_2 520 544 IPR003591 -
Bhi11g01860 1035 Gene3D Ribonuclease Inhibitor 157 268 IPR032675 -
Bhi11g01860 1035 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 33 1030 - -
Bhi11g01860 1035 Gene3D Ribonuclease Inhibitor 340 644 IPR032675 -
Bhi11g01860 1035 SUPERFAMILY L domain-like 36 333 - -
Bhi11g01860 1035 Gene3D Ribonuclease Inhibitor 38 155 IPR032675 -
Bhi11g01860 1035 PRINTS Leucine-rich repeat signature 474 487 - -
Bhi11g01860 1035 PRINTS Leucine-rich repeat signature 520 533 - -
Bhi11g01860 1035 Pfam Leucine Rich Repeat 129 151 IPR001611 GO:0005515
Bhi11g01860 1035 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE, PUTATIVE-RELATED 33 1030 - -
Bhi11g01860 1035 ProSitePatterns Protein kinases ATP-binding region signature. 719 742 IPR017441 GO:0005524
Bhi11g01860 1035 ProSitePatterns Serine/Threonine protein kinases active-site signature. 843 855 IPR008271 GO:0004672|GO:0006468
Bhi11g01860 1035 ProSiteProfiles Protein kinase domain profile. 713 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi11g01860 1035 Gene3D Ribonuclease Inhibitor 269 339 IPR032675 -
Bhi11g01860 1035 Gene3D Phosphorylase Kinase; domain 1 695 794 - -
Bhi11g01860 1035 SUPERFAMILY L domain-like 377 631 - -
Bhi11g01860 1035 Pfam Protein tyrosine and serine/threonine kinase 715 931 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g02312 Bhi-Chr4:63599184 Bhi11g01860 Bhi-Chr11:52985620 0 dispersed
Bhi04g02313 Bhi-Chr4:63609588 Bhi11g01860 Bhi-Chr11:52985620 0 dispersed
Bhi08g02170 Bhi-Chr8:62014858 Bhi11g01860 Bhi-Chr11:52985620 5.09E-16 dispersed
Bhi11g01854 Bhi-Chr11:52817494 Bhi11g01860 Bhi-Chr11:52985620 2.68E-44 dispersed
Bhi11g01857 Bhi-Chr11:52909207 Bhi11g01860 Bhi-Chr11:52985620 0 dispersed
Bhi11g01858 Bhi-Chr11:52937328 Bhi11g01860 Bhi-Chr11:52985620 0 dispersed
Bhi11g01859 Bhi-Chr11:52978266 Bhi11g01860 Bhi-Chr11:52985620 6.99E-06 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88422 PF07714 PK_Tyr_Ser-Thr 4.60E-37 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01860 - - csv:101219467 1756.88