Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01865 TGTTTTTAAAATTTTGAGAGTGAAAATGGAGGTCGAGAGAGAAGAAGAAGATGTGAGAGTGGGAGCGAACAGGTTCGAAGAGAGGCAGGCGATGGGGACGGCAGCTCGGAAGGACTACCGAGAGCCAGCCCCGGCGCCACTGTTCGAGGGCGGAGAGTTAAGGTCATGGTCATTCTACAGGGCTGGGATTGCAGAGTTTGTAGGGAGTTTGTTGTTTCTTTATGTGAGTGTATTGACAATAATGGGTGTGGCCAGAGCTCCAAATAAGTGCTCTACTGTTGGAGCCCAAGGCATTGCTTGGGCCTTTGGTGGAATCATCTTTGTTCTTGTCTATTGCACTGCTGGTATTTCAGGTGGTCATATAAACCCAGCAGTCACATTCGGGCTACTACTGGGAAGGAAGCTATCGCTTACAAGGGCAGTGTTTTACATTATAATGCAGTGCCTTGGCGCCATCTGCGGCGCCGCCGTCGTCAAATCCTTCGAAAACGGCCCTTTCGAAAGGCTCGGTGGCGGCGCCAACACCGTTAATGGAGGCTATTCTACAACAGCTGCCCTTGGATCTGAGATCGTCGGTACATTTCTGCTTGTTTACACCGTCTTTTCAGCCACCGATGCCAAGCGAAATGCCCGAGATTCCCACGTTCCTATGTTGGCTCCTCTTCCGATTGGGTTTGCAGTGTTTTTGGTGCATTTAGCCACCATTCCGATCACCGGAACTGGCATTAATCCGGCGAGAAGCCTCGGTGCCGCCCTTATTTACAACCGCCACCAAGGCTGGCATGACCACTGGGTGTTCTGGGCAGGGCCGTTGATCGGGGCTGCACTTGCGGCTCTTTACCATCAGACGGTGATCAGAGCCATCCCATTCAAGTCCAAATGATATCATCTCAATCCTATGATTATGGACGCTTTTATTTATAAACTATGCTTCCAATTTCAAATTATGCGACT 954 50.21 MEVEREEEDVRVGANRFEERQAMGTAARKDYREPAPAPLFEGGELRSWSFYRAGIAEFVGSLLFLYVSVLTIMGVARAPNKCSTVGAQGIAWAFGGIIFVLVYCTAGISGGHINPAVTFGLLLGRKLSLTRAVFYIIMQCLGAICGAAVVKSFENGPFERLGGGANTVNGGYSTTAALGSEIVGTFLLVYTVFSATDAKRNARDSHVPMLAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNRHQGWHDHWVFWAGPLIGAALAALYHQTVIRAIPFKSK 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 53235998 53238211 + XM_039049403.1 Bhi11g01865 50577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01865 285 TIGRFAM MIP: MIP family channel proteins 56 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi11g01865 285 ProSitePatterns MIP family signature. 112 120 IPR022357 -
Bhi11g01865 285 PRINTS Major intrinsic protein family signature 52 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi11g01865 285 PRINTS Major intrinsic protein family signature 94 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi11g01865 285 PRINTS Major intrinsic protein family signature 131 150 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi11g01865 285 PRINTS Major intrinsic protein family signature 180 198 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi11g01865 285 PRINTS Major intrinsic protein family signature 216 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi11g01865 285 PRINTS Major intrinsic protein family signature 256 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi11g01865 285 Pfam Major intrinsic protein 44 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi11g01865 285 PANTHER AQUAPORIN PIP1-4-RELATED 5 285 - -
Bhi11g01865 285 CDD MIP 52 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi11g01865 285 Gene3D Glycerol uptake facilitator protein. 37 284 IPR023271 -
Bhi11g01865 285 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 5 285 IPR034294 -
Bhi11g01865 285 SUPERFAMILY Aquaporin-like 45 278 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g01865 Bhi-Chr11:53235998 Bhi12g00276 Bhi-Chr12:8092411 8.93E-164 dispersed
Bhi11g01865 Bhi-Chr11:53235998 Bhi05g01707 Bhi-Chr5:55341197 9.84E-127 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01865 K09872 - qsu:111983155 463.381