Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01900 TAATCGAATGGTTAGGTGAGTATTCAATGTTAGCGACAAACTTAAAGACATTGGTAAGCGTCACTTGGTGATCTATTTCCATCAACAAGATGTTTGATGAAAGTGAAAGGGCATTTTGCATTACATAGAATGTCATCAAACGTATGGAATCAACTGAGAACATAGATTCTTGTGTATTGTAGCTAACAGATCTTCCAGAACCTTTTTCTTTTTCTTTTTCTCTTTTTCAATTTTCAATTTTTTTTTTCAATTTTTGTTTTGTAATTTGTGTCCCCCCCACCACCCCACTTCTTTCTTTTTCTTCCCAGTAATTTCCTCTGAATTCTCTGGTGACCATTGCACGTTTCTGTTCATCTTTACAGTCCTCACTTCCGTTCAAGCCCTCCAACATTAGCACAGACCTCTGTCTGTCGGACCATTGTTTTATTCTTTACCAAATCCTCTTGTTTTTAACAGAACCATGAGTTCTATTATAACTTCCTCTTCAATTCTATATTGCAAACTTTAATTAATGGAGTTGAAGGGGTGTTACCGAATCCAATAACCCACTTCTTTAAATGCCAAAGTTCGGAGAAATTAATTGGAGCCGTCGTTGGTTGGTTCTCTGATATGTGCTTGGTCTGTGGTGGAAGTGGTTGTGAAAGAGTTTTAGCTTGTGGGTTAAGAAAATGGGGCCGCAGGAAGTTTCCCAGTCCGACATTGATTTGGAACAGGGGAATCATCGGCGGTCTGTCAGCGGTAGTGACTTGAGCGCCGATTGTAGCGTCTATTTCTCTGACGCCGACGAGGGTTCGTGTTATTCTCAGTTTTTTTCGACCAACGGTGGCTCTTACGATGAGTATAGGTTTGCTTTCGTTTCTCAGCCGGAGGTTGGGGTTGTTTCGGATTCTCGGCGAGTTTCGTCGGTTTCGGATCGTTCGGTGGAGGTTGAAAATGAAAATGGGATTACTGAAATTAAGGTGCATTCAGCTAAAGTAGAGAGAGATTGTAGGATTTGTCATTTGGGTTTGGAGAGTAATAGCCAAGAATCTGGAATCCCAATCGAATTGGGTTGTTCATGCAAGGATGATTTGGCTGCTGCTCACAAGCATTGTGCTGAAACCTGGTTCAAAATCAAAGGAAATAAGACATGTGAGATTTGCCATTCCATTGCACGGAATATTCTCGGACCAAACGAGGTTGAGTTAACAGAGCAATCTAATGAATCCAACAACGCCTCCTCGACAACTACAGTTGCTGCATCAATTCCTTCATCAGACAGCCAAAGCTTCTGGCGTGGGCATCGGTTTCTGAATTTTCTACTTGCTTGCATGGTCTTTGCTTTTGTTATATCTTGGCTGTTTCACTTCAATGTGCCCTCGTAAACATATTGCCTAGAAGTAAGTAGTATCGAAGACGGGGGGAAATCCGATTAAGGAACTTGCAGAATTTGCAGCTGCAAAAGACCCTCCAGAGAATTGCCTACAGAGTGTCCATAACTTCATATAGATTATCATCCTATACACATGTACCTATCCCAACATTCCCCACAAAAGTTCTTTTTTTTTCCACTGCACTTCCATTCAATTCCAAGTTCTAGAGAAATGTGGTTCAGTCGAGAACATCCTTGATGATTCTGAGTTTTCCAACGAGCATCATCTCTCATTTTTCTTACTA 1656 41.06 MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRFAFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 231
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 54163095 54166262 + XM_039048712.1 Bhi11g01900 50612
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01900 231 PANTHER ZINC FINGER, RING-CH-TYPE 8 231 - -
Bhi11g01900 231 MobiDBLite consensus disorder prediction 1 25 - -
Bhi11g01900 231 Pfam RING-variant domain 107 158 IPR011016 GO:0008270
Bhi11g01900 231 PANTHER OS01G0850200 PROTEIN 8 231 - -
Bhi11g01900 231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 93 166 IPR013083 -
Bhi11g01900 231 CDD RING_CH-C4HC3_MARCH 107 159 - -
Bhi11g01900 231 SUPERFAMILY RING/U-box 104 161 - -
Bhi11g01900 231 SMART ringv_2 106 159 IPR011016 GO:0008270
Bhi11g01900 231 ProSiteProfiles Zinc finger RING-CH-type profile. 99 165 IPR011016 GO:0008270
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Bhi03g02093 Bhi11g01900 CCT
Bhi03g02093 Bhi11g01900 ECH
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g00549 Bhi-Chr8:18737601 Bhi11g01900 Bhi-Chr11:54163095 7.41E-49 dispersed
Bhi08g00550 Bhi-Chr8:18737602 Bhi11g01900 Bhi-Chr11:54163095 7.41E-49 dispersed
Bhi11g01900 Bhi-Chr11:54163095 Bhi08g00282 Bhi-Chr8:10758939 2.17E-12 dispersed
Bhi12g00064 Bhi-Chr12:1815464 Bhi11g01900 Bhi-Chr11:54163095 7.38E-12 dispersed
Bhi03g00267 Bhi-Chr3:5705307 Bhi11g01900 Bhi-Chr11:54163095 1.20E-31 transposed
Bhi05g01931 Bhi-Chr5:60177212 Bhi11g01900 Bhi-Chr11:54163095 3.34E-28 transposed
Bhi11g01900 Bhi-Chr11:54163095 Bhi03g02093 Bhi-Chr3:45200867 8.16E-60 wgd
Bhi11g01900 Bhi-Chr11:54163095 Bhi04g02349 Bhi-Chr4:64503502 4.36E-72 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01900 - - csv:101218915 431.409