Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01922 CCGGCATTACCCGGTCTCCCTCCGGTTTCCTCAAACCCTATGCTCCTCTTCCCTCCTTCCCCTCAAACCCACACAGATTAACAATCCCAAACCATTTTTTCCCCCTTCCTTTTCTTTTTTTTTTCTTCCTCTCCTTCTTTTAAAGAGGGAGAGATTAAAAAAAAAAAAAAAAAAAAAAAAAGTTGCAGAGAAAGAAAATCTTTATTTTTGTGCAGAACACACACCAACACTTGTGAAAGAAAAGAAAAGAAAAGAAAAAACAGTTTTTGATGGCTGAGGGTATTGAATCCTACGACCATGTCCCTCAACAGAGCCGCCGCGACAAGCTCCGGGAGCTTCCCGACCACCACCACCGTTCCAATTTCCTCCCTTTTTACGACCCTTCTTCTTCCGATTCCTCTAATCGCTTCCAATTTCACCACCACCCTTTTTTCGACCCCCAATTCCAATCCCCTCTTCTACCCGAAATCCATTCTTTCCCAGCTGAGCCTCTTTCCCTTTCCCTTTCCCCTCACCCCTTTCTCGCTTCCCCTATTCCCGCTCCTCTCCCTCTCGGCCCTTTCACCGGCTACGCTTCCATTTTGAAAGGCTCCAGGTTCCTCAAGCCCGCCCATCACTTGCTACAGGACCTCTGTGATTCTGTCCATTCCTCTTCTTCTTCTTCTGCTTTCCTCCACGATCCTTCCTCTGATTCCTTCACCGATTCCCCAATTCTCGACCATCATCACCCCCTTCCTTCTGATTCTTCTGCCCCTCCTCATAAATCCACCCTTCTTTCCATGCTTGATGAGGTTTACAGGAAATATAAGCAGTACTATCAACAAATCCAGGAAGTAATGACATCGTTCGAGTACATCTCCGGGCTCGGGAATGCGGCGCCGTATGCCAACCAGGCTATAAAAGCCATGTACAAGCATTTCAAGTGCTTGAAAAATGCTATTCTAGACCAACTTCAATTCAATAAAAAGACTCATGGTGACTACAATCAAAGATCCGTTCAGAACCCGGGATTTCTTGACCATCAGCCTGTTTGGCGACCACAGCGAGGGCTTCCTGAACGAGCAGTAACTGTTCTTCGTGCTTGGTTGTTTGAACATTTTTTGCATCCTTATCCTTCTGATACAGACAAGCTTATGTTAGCAAAACAGACTGGTCTGTCTCGTAGTCAGGTATCTAACTGGTTCATTAATGCAAGAGTGAGGCTTTGGAAACCAATGGTTGAAGAAATATACATGCTGGAAACCAAGCAGCAACAAACACAGAAGAATTTACATAGAGAAGATCGAAACGCCAACAGGACGAACGATCATCATCATCCATCGAACTCATTGGCAATGGATAACCCCTCTACATCCACTCAACAAATTCAAGATACTCCTCCCAAACGCACCTGGAACGAACCTCATGATGTGCCAATGGGAAATCACAATGAACCCTTGAACGTATCTTACAACTTGTCAACCCATCCCCATGTAGCCACAAACACAAACATGGCGGGCAACAACGGTGGAGTTTCCTTAACTCTTGGTCTTCACCAGAACAATGTCATAGGTGGCTTTTCCGAACCCTTCCCTGTAGGGTTCCCTGTAGCAGCCACTCGACGTTTTGGCCTCGGAATCCTAGGCAACAACGATGGGTACGTAATGGGTGGACATTTTAGTAGAGATGTTCTTGGAGGTCAGATGTTACATGACTTTGTAGGGTGAAATCAATGTGGTGTTTTGGAAGTTAATATGATAGGAAAACAAGAGGTTCCATATTATTTGGTACTGATGTTGTATTATATACCATATAAAATGTGGGGTTTAGATGAGTACTACATGAAGAAGAGCATAAGCAAAAATTCAAAACCTGTAAATGGCTTACCTCCAAAATCGTACCAGAAAAAGAGAGCAAAAACAAAAGGAGAATTGAAATGTGAAAAATGCCATTATTTGCCCTTGTGTAACAATTTGGAATGGAATGAGAGGAGAAAAGAAAAGAATAGAAAAGAAAGGAAAAGAAAAGAAAAGGAAAGGGTTGTGAAGTACTGTAGGTGGTGAGTTCCTTTGCTTCTTATTGGATCAAATATATTTTTATAAGAATAATGGTTGTTAGAAATTCAACCCTAATTTGCTGTTTGGGTTTCTATGTATTTATGATTGGGATTTGAAAGTTTCATATTTATGGTTTCTCGTGCACTTAAAACTA 2190 42.69 MAEGIESYDHVPQQSRRDKLRELPDHHHRSNFLPFYDPSSSDSSNRFQFHHHPFFDPQFQSPLLPEIHSFPAEPLSLSLSPHPFLASPIPAPLPLGPFTGYASILKGSRFLKPAHHLLQDLCDSVHSSSSSSAFLHDPSSDSFTDSPILDHHHPLPSDSSAPPHKSTLLSMLDEVYRKYKQYYQQIQEVMTSFEYISGLGNAAPYANQAIKAMYKHFKCLKNAILDQLQFNKKTHGDYNQRSVQNPGFLDHQPVWRPQRGLPERAVTVLRAWLFEHFLHPYPSDTDKLMLAKQTGLSRSQVSNWFINARVRLWKPMVEEIYMLETKQQQTQKNLHREDRNANRTNDHHHPSNSLAMDNPSTSTQQIQDTPPKRTWNEPHDVPMGNHNEPLNVSYNLSTHPHVATNTNMAGNNGGVSLTLGLHQNNVIGGFSEPFPVGFPVAATRRFGLGILGNNDGYVMGGHFSRDVLGGQMLHDFVG 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 54758166 54762266 + XM_039049472.1 Bhi11g01922 50634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01922 478 MobiDBLite consensus disorder prediction 327 376 - -
Bhi11g01922 478 MobiDBLite consensus disorder prediction 145 164 - -
Bhi11g01922 478 SMART prehox3 99 226 IPR006563 -
Bhi11g01922 478 Pfam Associated with HOX 104 224 IPR006563 -
Bhi11g01922 478 MobiDBLite consensus disorder prediction 330 346 - -
Bhi11g01922 478 CDD homeodomain 255 316 IPR001356 GO:0003677
Bhi11g01922 478 SUPERFAMILY Homeodomain-like 257 322 IPR009057 -
Bhi11g01922 478 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 73 439 - -
Bhi11g01922 478 ProSiteProfiles 'Homeobox' domain profile. 252 315 IPR001356 GO:0003677
Bhi11g01922 478 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 9 73 439 - -
Bhi11g01922 478 MobiDBLite consensus disorder prediction 347 372 - -
Bhi11g01922 478 Pfam Homeobox KN domain 272 311 IPR008422 GO:0003677|GO:0006355
Bhi11g01922 478 SMART HOX_1 255 319 IPR001356 GO:0003677
Bhi11g01922 478 Gene3D - 258 320 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi03g02053 Bhi11g01922 CCT
Bhi03g02053 Bhi11g01922 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g00196 Bhi-Chr8:7981189 Bhi11g01922 Bhi-Chr11:54758166 1.47E-76 dispersed
Bhi08g00197 Bhi-Chr8:7981189 Bhi11g01922 Bhi-Chr11:54758166 1.47E-76 dispersed
Bhi11g01922 Bhi-Chr11:54758166 Bhi10g00190 Bhi-Chr10:4078749 5.61E-66 dispersed
Bhi11g01922 Bhi-Chr11:54758166 Bhi03g02053 Bhi-Chr3:44246944 2.02E-107 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2429 PF07526 POX 3.70E-29 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01922 - - csv:101221128 862.833