Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01968 CCTGTGACTTCCACCCAAACCCTCTTCAGAACTCCGTTCATCTCCAACTGGTCTGCACTCTCTTCCTCCTCCCTTTCCCCATTTTCCCTTCTCCATAAATGGCTTCCCTTCCCTCCACCACCATCTTCAATCCCACTTATGGCTTCTTCTTCCGGCCGCCACCCCGTCTACCGAGGCGTTCGCCGTCGCAACACCGGCAAATGGGTCTCCGAAATTCGCGAGCCGAGGAAGCCCAACCGTATTTGGTTGGGAACTTTCCCGACCGCCGAAATGGCTGCTGTCGCTTATGACGTTGCCGCCCTTGCTCTCAAGGGCCAAGACGCCGAGCTTAATTTCCCTAATTCTGCCTCGTCTCTCCCCGTCCCTGCATCTCGGTCACCGTCTGATATTCAGGCAGCGGCTGCATCTGCTGCCGCTGCTCTTGGAGCCGCTGCGGCAGCCATTGAGGCACGGAATAATAGCGGTTCTTATCGTGGAACTAATTCGAGCGACATCGTGTATGGAGGAAGATATGGTCAAGATGGATTGGGAAATCAGTTCATGGATGAGGACTTGATATTTGATATGCCTAATGTTCTAATGAATATGGCGGAAGGAATGCTTCTTAGCCCTCCTCGTTTCAACATCCATGGCGGAGACGACGACCACGATGACGGCGCTGACCAAAATCTTTGGAATTTTCCCTAA 687 53.13 MASSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDAELNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARNNSGSYRGTNSSDIVYGGRYGQDGLGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNIHGGDDDHDDGADQNLWNFP 182
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 56332683 56333369 - XM_039050346.1 Bhi11g01968 50680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01968 182 CDD AP2 11 69 IPR001471 GO:0003700|GO:0006355
Bhi11g01968 182 ProSiteProfiles AP2/ERF domain profile. 10 67 IPR001471 GO:0003700|GO:0006355
Bhi11g01968 182 PRINTS Ethylene responsive element binding protein signature 11 22 IPR001471 GO:0003700|GO:0006355
Bhi11g01968 182 PRINTS Ethylene responsive element binding protein signature 33 49 IPR001471 GO:0003700|GO:0006355
Bhi11g01968 182 Pfam AP2 domain 9 59 IPR001471 GO:0003700|GO:0006355
Bhi11g01968 182 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 3 182 - -
Bhi11g01968 182 SMART rav1_2 10 73 IPR001471 GO:0003700|GO:0006355
Bhi11g01968 182 SUPERFAMILY DNA-binding domain 10 69 IPR016177 GO:0003677
Bhi11g01968 182 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF024 3 182 - -
Bhi11g01968 182 Gene3D AP2/ERF domain 10 69 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01464 Bhi-Chr3:31171016 Bhi11g01968 Bhi-Chr11:56332683 4.90E-57 dispersed
Bhi11g01968 Bhi-Chr11:56332683 Bhi12g00800 Bhi-Chr12:24081018 9.57E-45 dispersed
Bhi11g01967 Bhi-Chr11:56298105 Bhi11g01968 Bhi-Chr11:56332683 1.11E-32 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2435 PF00847 AP2 8.70E-13 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01968 - - csv:101203380 294.278