Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01990 TGTGGAGAAATTGCGCTGTTACGCGCAACACTTGATCGCAAGTTCCACAGAACTTCAGTCTACAAGGCTCCCTCTCTCCCATTCCATCTCATAAATTCATAATTTCCTCAATCAGAAACAATTCTTTCATTCGCCAATTCGATCCTTCGTCTTCGTTGAGATAACAAAAGAAGCAAAAACCCTACCTCCGACCTGCGATTTCCCACTGATCTCTGCTCTTCACCAATGGAGTTTTGGGGTGCTGAGGTTAAAGCTGGAGAACCTCTCTTGGTGAGTCCCGGAGAGGAGAAGTTATTGCATCTATCGCAGGCCTGTCTTGGAGAGTCCAAGAACAAAGGAAGTGAACAGGTTTTCCTATATGTCAAGGTCGGCAATCAGAAGCTTGTTCTGGGGATACTATCCTCAGAGAAATTCCCACAAGTGTCGTTTGATCTGGTGTTTGACAAAGAATTTGAGCTATCTCATAATTGGAAAAATGGAAGCGTGCACTTTACAGGATATACGAGTTTCCTTCCAGAAGAGGAGGAATCTTCTTATACTGATTCGGAAGAGGGTTTTCCTCTAGCTGCCATTGACAATGGAAAGCAAGAGCTAGAGACTAAGAAAGATGCAAAGCCTGATACTTCTGGAACCAAGAAAAAAGTGCAGATTGTAGAACCAAACAAAGGTGGCTCTAATTCAATTATTGACAGTAAGAAGAATAAAGACAGTTCTGATGAAGATGATGACGAGGATGAAGAGAGCACGGATGATGAGAATGCAAATGAAGGTGAAGAAGATGATACTGATGATGATGAAAATGAGTTTTCTGGAGTTGATAGTGAAGACTCTGATGAGGAATCGGACGACAGTTTGGAAGAGGACGAGCAGACGCCAAAAAAGGCTGAAGCAAGCAAGAAGAGACCTTTAGATTCTGCTAATAAAACGGCTGCTCCTGATAAGAAGGCAAAACTCGTCACTCCTCAGAAGACTGATGGCAAGAAAGGCGTTGCTCATGTAGCTACTCCTCATCCTTCAAAGAAGGCCGGGAAAATGCCCGCTGCTAATGACAAAAATAAACAGCAAACTCCCAAATCAGCTGGTGGCGCATTCCCTTGCAAAACTTGCAACAGGACATTTGGCTCAGAAACTGCGTTACATTCCCACACAAAAGCTAAGCACACAGCCGAGAAGTGACCGGATCAATATTTTAGGTGGAATATGCTGGTTTCATTACTGTGGGATTAACACAGCATGGATCCAGCTCAACCTGGCCAGTATATTAGATCAGAATTACGATACTGGATGGTTGTGAATTTTCTACCCCCCACCCTCTTGAAGTTCATTCTCTAAATATTCTGGTGTGATTTCAAATGTTATTATTATCATAAGCTTTAGTTCCTTGTGAAGGTTCCTTTCCGACATTGCGTGTGCTGTAGAATTTTTTTAGATCCAGTAGAATATTGTTTAATGTTACTTAGCTGGAGTTCTCTTTATTATTGCCTTCTCTCCTGTCCTTTTTTCTAATACAATAGTGGGATGAGGGGGATTGAACCTTCGATCTCTACGATGCAAGTTTATGTCAA 1565 42.24 MEFWGAEVKAGEPLLVSPGEEKLLHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGILSSEKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSFLPEEEESSYTDSEEGFPLAAIDNGKQELETKKDAKPDTSGTKKKVQIVEPNKGGSNSIIDSKKNKDSSDEDDDEDEESTDDENANEGEEDDTDDDENEFSGVDSEDSDEESDDSLEEDEQTPKKAEASKKRPLDSANKTAAPDKKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMPAANDKNKQQTPKSAGGAFPCKTCNRTFGSETALHSHTKAKHTAEK 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 56740838 56745114 + XM_039049597.1 Bhi11g01990 50702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01990 316 MobiDBLite consensus disorder prediction 212 236 - -
Bhi11g01990 316 ProSitePatterns Zinc finger C2H2 type domain signature. 291 312 IPR013087 -
Bhi11g01990 316 MobiDBLite consensus disorder prediction 120 137 - -
Bhi11g01990 316 MobiDBLite consensus disorder prediction 164 211 - -
Bhi11g01990 316 Gene3D Classic Zinc Finger 288 315 - -
Bhi11g01990 316 ProSiteProfiles Zinc finger C2H2 type domain profile. 289 316 IPR013087 -
Bhi11g01990 316 MobiDBLite consensus disorder prediction 120 289 - -
Bhi11g01990 316 Gene3D Nucleoplasmin core domain 1 96 - -
Bhi11g01990 316 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 1 311 - -
Bhi11g01990 316 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 1 311 - -
Bhi11g01990 316 Pfam C2H2-type zinc finger 288 312 - -
Bhi11g01990 316 Pfam Nucleoplasmin-like domain 3 92 IPR041232 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g00093 Bhi-Chr10:2110812 Bhi11g01990 Bhi-Chr11:56740838 1.39E-62 dispersed
Bhi10g00092 Bhi-Chr10:2099110 Bhi11g01990 Bhi-Chr11:56740838 7.63E-64 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2438 PF17800 NPL 4.20E-13 CL0055 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01990 - - csv:101207572 481.1