Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g02008 ACATTTTTGTTCTTTTCTGGATAAGCACAAATTTTCTCCAACTATTGGATATCCGGCGCGGGAGTTGTCGCCGGTGCGTATCGTTTCCGTCGGAAAAGTGGCAGATGCCGTATGGCGTAAACGTAAAGAGATCACTCATCGAGGAAACAAGTTCGCGACGGATTTTTCATCATCGGCAACAGATCAGAAATCTTTATAGCAAAGCAGTAATCTAAAAGTAGTTTCGTTGGTATTTGATGATCCATCGCTTTGTGATCTTTGAAAATACCAATTCAAGTTGCTGCTTGGGATGGGATTTGGTAAGCGCAATAACTAGCTTAGTAACTCGTCGTTGACGTGAGGCGAATGTGGATTTGAGCTCTGTTCCAACAATTGTCAGACGTCCATGGACAAAGGTTCCAAGCATCAGGTATCCTTGAGGGGAGCGAGTGCAAAAGAAATTTCGAGGGATGCTCTTGTTCAAAAGGTTATCCAGGAGAGAGAGCAACGTCAATATGCAAGAAAAGTGGCAGCTGCGGCTCTCTTTATTCAGAGAGTTTGGAGGCGCTTCAGAGTGACTAAGATAGCTGCTTTGCAGCTTCAAGTAGAATGGGAGGATTTGATGAATAGTCATTCTGGTGCACAGGGTGGCACATTCATTGCCTGTAATATTTTGAGACCATTTCTCTTCTTTATCTCGTCTTTACTGAAACGACCTCAAAATATCAAGACCAGAGATACAGACTGTATGAAAAATTGCTTTAAAATCTTGTTTGAAAGCATCAGTTCTACCGAATCGAAGAACAACTTTTGCTCCTTGGCCACTGGTACATCTGAAGAAAGAAGAATATGGACTTACCAATCAAAGAAGCTTATTTCCGTATGCTTATTTATTCTTGTGCATTTCGACAAGTTGCAAGTGAAGGAGCAAGAAATTATTGTTACGACCTCTTTAGCCATGCGGCTTATAGTTGTCTTAACTGATCTTCATGGGTGGAAGAGTGTTAATGAAAATAGTCGTGCTGTTGCTGATGCAGCATTAAAGAATTTAGTTCATTATCTGGGAACATCTGAAAGTGGTCTTTACATATCAGTCAGGCAATACTTGTATAAATTGAGTGTCCTCCAGTCTACGCAGACCAGCAGTACCATCCAGGCAAATGATTTATTAGTTATTACTGTGAGTGCTATAACTTTAGCATTACGACCATTTCATTTAATGATTTTCGATACAATTGGTACTACTTCGTGGGAAGGGCATCATGTTGCTGAACAGTTTTGCTTGTTCCTACTCACAATTCCTGGGCTTGTTCAACATCTGCCACAAGTTCTGGTGCCAGCTGTAAAGCACCGATCTATTTTGCTACCGTGCTTCTGGACTCTATTGGCCAAGAAAGAGACAATTTTGTTGGGAATGTCTGATCTGGATCAGTTATCAGTTGAATGTGGTTCTAAGGTTGTTCCGGCGGTTGGGTGGGCTCTTGCTAACATTATATGTTTTGTAGCAGGGAGTGAAATTAAGGCAAGGGATTCTGGTTGGTTCAGTCAGAGTTTAGACTATGTGTTGTATGTTCGTGTTGTTGTCACTTTGGCAGAAAGTTTTTTAGCTCTGAATGGGGATTCAGGATGTGGTAAAAAGGAGAAGCAAGATATCCAGAGCGTCAATGTAACTTCTTATGAACCCTCTGATGCAGCTGTTCTCAAGAATGAAATGACATCTATGTCCATAACCACATCGTTCATTGATATGCTTAGGCCTATTTGTGAACAGAGGCATCTCACAGATCTTTTGAAAATAGTAAATACAGATGTTTATTCAGAAGTTAGCACTGCACAATCAAATAATATGGAATGTATGAAAAGCTTGAAACTGCTCGATATATCATACTTCTACATGTATATGCTCAGAATATTTTCATTATTGAATCCCCCGGTCGGATCGTTACCTATTCTTAATATGTTATCTTTCACTCCTGGATTTCTTGTTGATTTGTGGGGAGTCTTAGAAAGTTCCCTTTTCCCCAATGATGCTGATGAAGCTGAAGATCACTTTCCTGGCTCAAGTAAACTATCAAGTAAAAAAAAAGATGAAGTTTTTGGCAAAAAGCAAAATCAAGTCGGTAAGGATGGAAGTAGTAGGTGGGTAACTGTCTTCCATAAGTTCACGAGCAAGTCACAACCAGATAGTGATCATTTGGACCCAATTGAAGTTCAATCTAGTTCTAGACAGGGGGATGACAACTTATGCGATTTGTGGGACATAAAATCTTTGAGTTGTGGTCCACAAGGTATTTCAAAAGATTTGTCATGTCTGCTCTATCTTTTCAGTGCCACTTATGCTCATCTGCTGTTAGTTCTAGATGACATAGAGTTCTATGAAAAACAGGTTCCATTCAGGCTGGAGCAGCAAAGGAAACTTGCATCAATGCTTAACACGCTTGTGTATAATGGCTTGTCCCATGGTACTGATCAGCAAAACACGTACCTTATGGAATCTGCAATCAGGTGCTTGCATCTGATGTATGAGAGGGATTGCAGACATCAGTTTTGTCCTCCTCCGCTATGGCTTTCACCTGCTAGAACAAGTAGACCACCTGTTGCAGTTGCTGCAAGAACTCACGAAGCTTTATCAGCCAACTTAGGGGCAGATGATCCTTTAACAGTTCCAAGTATAGGATCAATTATTACTACCACACCACATGTGTTCCCATTTGAGGAAAGAGTTGAAATGTTCAGAGAGTTTGTCAAGATGGACAAAGTCTCCCGAAAAATGGCAGGTGAAGTTGGTGGTCCTGGTTCACGATCATTTGAAATTGTAGTTCGTCGTAGCCATGTTGTTGAAGATGGATTCAGACAGTTAAATTCTCTTGGGTCAAGGCTGAAATCAGCTATCCATGTTTCATTTGTTAGTGAATGTGGTCTTCCTGAGGCTGGCCAAGACTGTGGTGGATTATCCAAAGAGTTTTTGACTGATATTGCCAAAGCAGCATTTTCGCCTGAATATGGACTTTTCTCTCAAACCTCTACTCCAGACAGGCATCTTATCCCTAATGCATCTGCACGATATCTCGACAATGGTATCCAGATGATCGAGTTTCTAGGTAGAGTTGTTGGAAAGGCTCTCTATGAAGGAATTTTGCTTGACTACTCATTTTCGCATGTTTTTGTCCACAAGCTTTTAGGGCGATATAGCTTCCTTGATGAGCTATCAACACTTGATCCTGAGCTCTACAGGAATCTCATGTATGTCAAGTCTTACGAGGGTGATGTCAAAGAACTCTCGCTGGATTTCACTGTAACTGAAGAATCATTTGGTAAACGACATGTTATTGAGCTTAAACATGGTGGCAAGGATATTTCTGTTACAAATGAGAATAAGATGCAGTATGTTCACGCCATTGCTGATTATAAACTTAATCGACAGATATTGCCTTTTTCAAACGCGTTTTATAGGGGTTTAACTGATCTTATATCACCATCTTGGTTGAAGTTATTTAATGCAAGTGAATTCAATCAGTTGCTTTCAGGTGGAAACCATGATATTGACGTCAATGATTTGAGAAAGAATACACGATATACAGGTGGTTACACAGAGGGCAGCCGAACAATTAGTATTTTCTGGGAGGTTATTAAAGGATTTGAACCAAAAGATCGTTGTTTGCTTCTTAAATTTGTCACCAGTTGTTCTCGAGCCCCATTACTTGGATTCAAATACCTGCAACCAGCATTTACCATTCATAAGGTTTCGTGTGATGTACCTATATGGGCTTCAATAGGAGGACAGGATGTCGAGCGGCTTCCAACTGCTTCCACTTGCTATAATACTCTCAAGCTTCCTACATATAAACGTTCGAGTACTTTGAGATCAAAACTTCTCTATGCGATCAATTCCAATTCAGGATTTGAACTTTCTTGATGTATCTGACATCAGGCATGCAGCTGATTGGTCCAAACTTACATCTAATTATTTTCTAGTCGGTACACAATGTGAGTGATAATTGTTCTTATTTACTAGTCTGTGTCACATCAAAGGCGGTTGTTTTTTGATCTTATCCCATCTTAGGCAATGCCACAGTTTCATCTTGTTGTAAGGAAACGTTTGAAAAAATATACACAATAATTTCTGTGGAACTGCCAGTCCTAAATGATTCGACTTGTTTTTGTTTTTCTTGAGCATTTCGTGACAGCTTTTGTAGAAACAGTATATGAGATCAGATTCATCCATCACAAACTTCAGGTGA 4220 40.07 MDKGSKHQVSLRGASAKEISRDALVQKVIQEREQRQYARKVAAAALFIQRVWRRFRVTKIAALQLQVEWEDLMNSHSGAQGGTFIACNILRPFLFFISSLLKRPQNIKTRDTDCMKNCFKILFESISSTESKNNFCSLATGTSEERRIWTYQSKKLISVCLFILVHFDKLQVKEQEIIVTTSLAMRLIVVLTDLHGWKSVNENSRAVADAALKNLVHYLGTSESGLYISVRQYLYKLSVLQSTQTSSTIQANDLLVITVSAITLALRPFHLMIFDTIGTTSWEGHHVAEQFCLFLLTIPGLVQHLPQVLVPAVKHRSILLPCFWTLLAKKETILLGMSDLDQLSVECGSKVVPAVGWALANIICFVAGSEIKARDSGWFSQSLDYVLYVRVVVTLAESFLALNGDSGCGKKEKQDIQSVNVTSYEPSDAAVLKNEMTSMSITTSFIDMLRPICEQRHLTDLLKIVNTDVYSEVSTAQSNNMECMKSLKLLDISYFYMYMLRIFSLLNPPVGSLPILNMLSFTPGFLVDLWGVLESSLFPNDADEAEDHFPGSSKLSSKKKDEVFGKKQNQVGKDGSSRWVTVFHKFTSKSQPDSDHLDPIEVQSSSRQGDDNLCDLWDIKSLSCGPQGISKDLSCLLYLFSATYAHLLLVLDDIEFYEKQVPFRLEQQRKLASMLNTLVYNGLSHGTDQQNTYLMESAIRCLHLMYERDCRHQFCPPPLWLSPARTSRPPVAVAARTHEALSANLGADDPLTVPSIGSIITTTPHVFPFEERVEMFREFVKMDKVSRKMAGEVGGPGSRSFEIVVRRSHVVEDGFRQLNSLGSRLKSAIHVSFVSECGLPEAGQDCGGLSKEFLTDIAKAAFSPEYGLFSQTSTPDRHLIPNASARYLDNGIQMIEFLGRVVGKALYEGILLDYSFSHVFVHKLLGRYSFLDELSTLDPELYRNLMYVKSYEGDVKELSLDFTVTEESFGKRHVIELKHGGKDISVTNENKMQYVHAIADYKLNRQILPFSNAFYRGLTDLISPSWLKLFNASEFNQLLSGGNHDIDVNDLRKNTRYTGGYTEGSRTISIFWEVIKGFEPKDRCLLLKFVTSCSRAPLLGFKYLQPAFTIHKVSCDVPIWASIGGQDVERLPTASTCYNTLKLPTYKRSSTLRSKLLYAINSNSGFELS 1169
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 57236707 57251545 + XM_039048936.1 Bhi11g02008 50720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g02008 1169 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 5 1169 - -
Bhi11g02008 1169 CDD HECTc 801 1167 IPR000569 GO:0004842
Bhi11g02008 1169 Gene3D Hect, E3 ligase catalytic domain 927 1006 - -
Bhi11g02008 1169 SMART hect_3 819 1169 IPR000569 GO:0004842
Bhi11g02008 1169 Pfam HECT-domain (ubiquitin-transferase) 856 1169 IPR000569 GO:0004842
Bhi11g02008 1169 Gene3D Hect, E3 ligase catalytic domains 803 1041 - -
Bhi11g02008 1169 ProSiteProfiles HECT domain profile. 825 1169 IPR000569 GO:0004842
Bhi11g02008 1169 MobiDBLite consensus disorder prediction 589 608 - -
Bhi11g02008 1169 Gene3D Hect, E3 ligase catalytic domain 1044 1168 - -
Bhi11g02008 1169 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 5 1169 IPR044611 GO:0000209|GO:0061630
Bhi11g02008 1169 SUPERFAMILY Hect, E3 ligase catalytic domain 800 1162 IPR035983 GO:0004842
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g02008 Bhi-Chr11:57236707 Bhi12g01956 Bhi-Chr12:62171605 2.15E-103 dispersed
Bhi11g02007 Bhi-Chr11:57236707 Bhi11g02008 Bhi-Chr11:57236707 0 tandem
Bhi11g02008 Bhi-Chr11:57236707 Bhi11g02009 Bhi-Chr11:57236707 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g02008 K10588 - csv:101205886 2131.29