Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g02012 CCATTCAAGAGGAATCCACCAGTCTGTATAAAGCCAAAACACCTTATATAGATTCTTTCTTCCAACTTTTCAATGGTCATGTCTTACTACTTTATTCTCAAGCCCCGTTCTCTATTTACGCCACTCCTGACCTAATCTGTTCCATAAATCAGCTCTTCCTCATTGATCCTCTGATACATGGTAACTATGAAGATCCTAACACCACGCTTCTTTGGAAGTTACCTTTTCTTTCTTCTGTTCTTTCGTCTCTTCTGCCATTCTCAAAAAACCTGCCCAAGCTGTGGCCCCTTTGAAGTTCCTTATCCTCTCAGTACTAATCCCAACTGTGGTGACTTAGACTATGCTCTTCGCTGCGATTCTCATTCACAGAAACTCTACTTTGATGCACTCAATGGAAGTTCATATCCTATCCTCAAAATCAATGCTTCAAGTCAACGTATGGTGATCCAACCATCTCCATGGGTTCCTGGCTCCTGTGTTACTCAAGACATGTTGGTTGGTGAAGGACTGTGGTTAAACCAATCACTCCCTTTTAACATCACTTCATCAAATACAATTTTCCTCTTGAACTGTTCTCCCCGTTTACTGGTCTCACCGCTCAATTGCACTCCTTCCAGTCTCTGTCACCACTACTTGGCAAGTTCAGGACGAGTCGATGGAGAAAGAGCATTTCAGTGTGCAAGTGTTCTTGACCCTTGTTGTACCTTCATTCCTGGTGGGATGCCCTCAGCTTATAAGATAAGGCTTCATAACTCAGGCTGTAGAGCATTCAGGAGTATCCTTCATCTGGATGTTGGAAAGCCTGCAAATCAATGGGAGGAAGGTCTGGAAATTCAATGGGCTACTCCACCTGAACCAATCTGTAGAACTCAATCTGATTGCACTGGAGCCTCAGATTGTCTTCCTACCGGCGGTTCAAACAGCCGTTATCGTTGCCTTTGCAGAAGGGACTACCATTGGGATCAGAATCTTGGAACATGCCGGAGAATGAATAGGAAGAGCACAGTTAGGCTCAGCATAAAGCTCTTGGTATGTCTCGTTTCCTTTTTCATTCTAGCTGCGGTTATAGCTCTAATTACAGTCAGGAAGTCCAGAACTTTCAGTAAACAGGAAAAGCTATGTAAAGAAAGAGAAGATATGTTGAATCTAAGCCATGGCGGCAGACCAGCTAGGATGTTTCATTTGAAAGAGATGAAGAAAGCAACAAATGAATTTTCGAAAGACAGAGTCCTAGGCAGTGGTGGCTTTGGAGAGGTTTACAAAGGTGAACTTGAAGATGGGACCGTCGTAGCCGTGAAGTCGGCTAAAATGGGTAGTCTAAAGAGCACGGAACAAATACTCAACGAAGTTGGAATACTATCTCAAGTAAATCACAGGAATCTAGTGAAACTTATAGGTTGCTGTATAGAAACTGAGCAACCATTGATGATATATGAATACATTTCCAATGGCACCCTCCATGACCATTTACATGGTAAGATTCCTACTTTCTTGGACTGGAGAAAAAGGCTAAAAATTGCTTCACAAACTGCTGAAGCATTAGCTTATCTGCATTCAGCTGCATACCCTCCCATCTATCATAGAGATGTCAAGTCGACAAATATTCTTTTAGATGATAACTTCAATGCCAAAGTCTCAGATTTTGGACTTTCTAGATTGGCTTTGCCAGGAATAAGCCATGTTTCAACTTGTGCACAGGGTACATTAGGTTACCTAGACCCAGAATACTATCGAAATTACCAATTAACGGATAAAAGTGATGTGTATAGTTTTGGAGTTGTCCTGCTTGAGCTTTTAACCTCTCAAAAGGCCATAGATTTCACAAGAGATGAAGATAGTGTCAATCTAGCAATCTTTGTGATCCAACAAGTGCAAAATGGTACATTCATTGATGCCATCGATAAACAGCTTATCAGTGACGATCCGTCCAGCAATATACTGATCAGTGTGAAGCATTTCTTGGAGCTTGCACTCGCCTGTTTGAGGGAGAGGAAAGTGGAAAGGCCTTGCATGAAGGATGTACTCCAGGAACTTGAATACATAACTCAGATATTGGAGAATCCGGAAACAGTTGCTGAAGAATAGATTTGTTGTGTTAACCTCTTTTACTCTTTGAATATTCATTATTTAAAAAAAAAAAAAAAAAAAAAAA 2152 41.22 MVTMKILTPRFFGSYLFFLLFFRLFCHSQKTCPSCGPFEVPYPLSTNPNCGDLDYALRCDSHSQKLYFDALNGSSYPILKINASSQRMVIQPSPWVPGSCVTQDMLVGEGLWLNQSLPFNITSSNTIFLLNCSPRLLVSPLNCTPSSLCHHYLASSGRVDGERAFQCASVLDPCCTFIPGGMPSAYKIRLHNSGCRAFRSILHLDVGKPANQWEEGLEIQWATPPEPICRTQSDCTGASDCLPTGGSNSRYRCLCRRDYHWDQNLGTCRRMNRKSTVRLSIKLLVCLVSFFILAAVIALITVRKSRTFSKQEKLCKEREDMLNLSHGGRPARMFHLKEMKKATNEFSKDRVLGSGGFGEVYKGELEDGTVVAVKSAKMGSLKSTEQILNEVGILSQVNHRNLVKLIGCCIETEQPLMIYEYISNGTLHDHLHGKIPTFLDWRKRLKIASQTAEALAYLHSAAYPPIYHRDVKSTNILLDDNFNAKVSDFGLSRLALPGISHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTSQKAIDFTRDEDSVNLAIFVIQQVQNGTFIDAIDKQLISDDPSSNILISVKHFLELALACLRERKVERPCMKDVLQELEYITQILENPETVAEE 635
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 57260631 57262782 + XM_039047543.1 Bhi11g02012 50724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g02012 635 Pfam Wall-associated receptor kinase galacturonan-binding 32 90 IPR025287 GO:0030247
Bhi11g02012 635 Gene3D Phosphorylase Kinase; domain 1 316 421 - -
Bhi11g02012 635 SMART serkin_6 346 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi11g02012 635 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 631 IPR045274 GO:0007166
Bhi11g02012 635 SUPERFAMILY Protein kinase-like (PK-like) 324 623 IPR011009 -
Bhi11g02012 635 Gene3D Transferase(Phosphotransferase) domain 1 422 633 - -
Bhi11g02012 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Bhi11g02012 635 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Bhi11g02012 635 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 23 631 - -
Bhi11g02012 635 CDD STKc_IRAK 352 620 - -
Bhi11g02012 635 Pfam Protein tyrosine and serine/threonine kinase 348 619 IPR001245 GO:0004672|GO:0006468
Bhi11g02012 635 ProSiteProfiles Protein kinase domain profile. 346 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01853 Bhi-Chr4:46490803 Bhi11g02012 Bhi-Chr11:57260631 5.85E-95 dispersed
Bhi04g01854 Bhi-Chr4:46523176 Bhi11g02012 Bhi-Chr11:57260631 2.52E-91 dispersed
Bhi04g02374 Bhi-Chr4:64884175 Bhi11g02012 Bhi-Chr11:57260631 0 dispersed
Bhi11g01002 Bhi-Chr11:30029160 Bhi11g02012 Bhi-Chr11:57260631 1.08E-07 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88430 PF07714 PK_Tyr_Ser-Thr 5.50E-48 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g02012 - - csv:101221284 1180.62