Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g02018 GAAAAAAGAAAAAACCCACACCGCACCGCGCGCCCTTAAACCTTAACCCCACCAAAACCTAAGTTAATCCTCCATCTTCTCCTTCCCGCAAACCGCCCAGCGAAAGCAGCCGCGCAGTCAGCTGCTGCCCACCGACGACCGCCGGCCACTTGCCAATCACCGATGGCAGATCACGCGGCTCCAGACTCTACCACCAGCGACGCGTCGGCCCCCGCTGCCGCCACCGCCACCGCCACCGACGGGTCGAGTTCTGCCCCACCTATTGTTACACCAGTGCCCAAACGAGCTTGGGGGGATGAAGAAGACGATGATGTGGGCGATACTGGAGATTCATCCTCGGCCCCTTCCGAGTACTTGGAATCCCTTAAGATCGAAGACGACGAAACAACGCTTGATGAACCCATAGACTCTAACATCACGGCGGTGACAACCGGTGGTACTCCATATACATCAGCCAGTACTTTTGAGGATTTGAATCTGTCTAAAGAGTTATTGAAGGGTTTGTATGTTGAGATGAGATTCCATAAGCCAAGTAAAATTCAAGCTATAAGTTTACCTATGATATTGACTCCTCCTTACAAAGATTTAATTGCTCAAGCACACAATGGTTCTGGGAAGACTACCTGTTTTGTGCTTGGGATGTTGAGTCGTGTTGATGTGAACCTGAAGGCTCCTCAAGCGTTTTGCATATGCCCTACAAGGGAGTTAGCCATGCAGAATATTGAGGTTCTTAAGAAAATGGGAAAATACACTGGGATAACTTCAGAATGTGCTGTTCCCGCTGACAGTGCTAACTATGTACCTATGTCAAAGCGACCACCAATAACTGCGCAAGTTGTGATCGGAACTCCTGGCACAATAAAGAAATGGATGTCATCGAGGAAGTTGGGAGTAAGTTGCGTGAGGATTCTTGTTTTTGATGAGGCTGATCACATGCTTGGCGAGGATGGCTTTCAAGATGATTCATTGAGAATCATGAAAGACATTGAGAGAAGTAGCCCTCATTGCCAGGTGCTTTTGTTCTCTGCTACATTCGATGAGAATGTTAAAAAGTTTGTCTCTAGGGTTGTCAAAGACTACAACCAGCTTTTTGTGAAGAAGGAAGAACTATCTTTGGAGAGTGTGAAGCAATTCAAGTTGATATGTCCAGATGAATTAACTAAAATTCGAGTCATAAAAGATAGAATTTTTGAACTTGCAGACAAATTGGGTCAGACAATTATATTCGTGCGCACAAGAAACAGTGCTGGCATGTTACATAAGGCACTAGTTGATCTTGGTTATGACGTGACTACCATTCAAGGGGCACTGACGAATGATATTAGAGACAAAATAATAAAAGAGTTCAAGGATGGTTTGACCAAAGTTCTTATTTCGACTGACCTTCTAGCTCGAGGCTTTGATCAGCAACAGGTCAATCTAGTTATCAATTATGATCTTCCTCTTAAACATGAACCTTCTCTACAAGCAACGAAATACAGATCTTCCTCATCGTCTGATCCTAACTATGAGGTGTACCTTCATAGAATTGGTCGGGCAGGTCGTTTTGGGCGCAAGGGAGCTGTGTTTAACTTGCTGTGTGGTGATGAGGAAATCGCGCGAATGGATAAAATTCAGAAGCATTTTGGCTCTGAAATAATAGAGGTTCGAGACTCTGATGAGGACATTCAAGCAGCCTTAAAAACTGCTGGATTGGTTTGATGTATAGTAATGAGTTTACCATGGCTTATTTCCGTTGACACCAACTACGAACTGAAGGCGATAAAACTTGAAACAGTTGGATGCAGAAAAGTGGATGGAAATGATGGTTCATAGTTTTTGTTTTGCTTTAAAGTTTAAAGGAAATTACATTTGGTTATGAGGTATCTAGTGTGTTTGAGTTGTTAATTTCTGGCATATGGTTAGGCTATTGTAAATTGTGGAGAGTTATGTTAGTTTTGCTGAAATCTCTTGATTGATGAAACCTGTTGAAATGAATAGAGTCTTTATAAACAAATGTGTTTTTATTTTTTATTTTTAATCTTTAAATGAAA 2033 42.7 MADHAAPDSTTSDASAPAAATATATDGSSSAPPIVTPVPKRAWGDEEDDDVGDTGDSSSAPSEYLESLKIEDDETTLDEPIDSNITAVTTGGTPYTSASTFEDLNLSKELLKGLYVEMRFHKPSKIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSCVRILVFDEADHMLGEDGFQDDSLRIMKDIERSSPHCQVLLFSATFDENVKKFVSRVVKDYNQLFVKKEELSLESVKQFKLICPDELTKIRVIKDRIFELADKLGQTIIFVRTRNSAGMLHKALVDLGYDVTTIQGALTNDIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKHEPSLQATKYRSSSSSDPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIARMDKIQKHFGSEIIEVRDSDEDIQAALKTAGLV 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 57436297 57439824 + XM_039050360.1 Bhi11g02018 50730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g02018 512 Gene3D - 84 315 IPR027417 -
Bhi11g02018 512 CDD SF2_C_DEAD 321 472 - -
Bhi11g02018 512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 481 IPR027417 -
Bhi11g02018 512 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 337 503 IPR001650 -
Bhi11g02018 512 SMART ultradead3 119 324 IPR014001 -
Bhi11g02018 512 Pfam DEAD/DEAH box helicase 125 298 IPR011545 GO:0003676|GO:0005524
Bhi11g02018 512 MobiDBLite consensus disorder prediction 1 65 - -
Bhi11g02018 512 MobiDBLite consensus disorder prediction 8 32 - -
Bhi11g02018 512 Pfam Helicase conserved C-terminal domain 335 463 IPR001650 -
Bhi11g02018 512 Gene3D - 316 503 IPR027417 -
Bhi11g02018 512 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 133 309 IPR014001 -
Bhi11g02018 512 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 78 494 - -
Bhi11g02018 512 SMART helicmild6 363 463 IPR001650 -
Bhi11g02018 512 CDD DEADc_DDX19_DDX25 106 309 - -
Bhi11g02018 512 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 99 128 IPR014014 GO:0003724
Bhi11g02018 512 PANTHER DEAD-BOX HELICASE DBP80 78 494 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g02018 Bhi-Chr11:57436297 Bhi12g01180 Bhi-Chr12:35064430 0 dispersed
Bhi11g02017 Bhi-Chr11:57436293 Bhi11g02018 Bhi-Chr11:57436297 0 tandem
Bhi11g02018 Bhi-Chr11:57436297 Bhi11g02019 Bhi-Chr11:57436319 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g02018 K18655 - csv:101222195 884.789