Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g02033 CCAAATGACATAAATTTCTTCCTTCTAAGACTCATGAGGATCAAAACAAACTTCTTCTTTTGGCTCTATACTCTTGTCATTGTAGCTCTTTCCATCACCATTGCCCTGTGCTCATTCTCACTTCCGTTGACCGCCATTGTCGCCACTGTAGGTCCTCACGACGGTGCTTTTGAGCTTGGCATTTTCAGCAGTCTAGTGAAAGAGAGTGGTTTGGATGAGCTTTTATCTCTTATGACTCAATTTGTGTCCAAACACCACGATCAATGGAAGCATAAAAAGAGTTGTGATGAGAAGAAATGGAACTTTGATTTGATATCTTTGTACAATGTTTCACTTACTTTGACTGTTGATTTAAAGGGATGTGCAAATTTTAGTAGTGTGCAAAAGGCAGTGGATGCTGTTCCTGAATATGGCTCTTCAAGGACCCTTATCCTAATTGACTCTGGAATCTACAGGGAGAAGGTAGTGATAGAAGCCAACAAAACAAACTTGATAATTCAAGGTCAAAGTTATCTCAACACTGCAATAGAATGGAATGACACAGCCAATTCCACAGGAGGCACCACTTACAGCTCTTCGGTCACCATCTTTGCTTCGAACTTCATTGCCTACAACATCAGCTTCAAAAACACAGCTCCTGAGGCAACTCCAGGGATTGTTGGAGGACAAGCAGTTGCACTTCGAATTGCAGGAGATGAAGCTGCTTTCTATGGATGTGGATTTTATGGAGCTCAAGACACACTTTATGATGACAAAGGGAGACATTACTTCAAAGAATGTTTCATTCAAGGATCCATCGATTTCATCTTTGGCAATGCTCGAACGCTCTACGATGGCTGTAGGATCAAGTCAATAGCAAAAGAAGTGTTGGAGGGTGGGGTGAGTGGAGCCATCACAGCTCAAGGAAGGCAAACAAGAAATGAGGAAACTGGTTTTGCTTTCATCAATTGCACCATCAATGGCTCTGGGAAGGTGTGGCTTGGTCGTGCCTGGGGCGCTTGTGCCACCGTTGTCTTCTCTAAAACATACATGACCGACATCGTAGCTGCCGATGGATGGAATGACTGGAGAGACCCTTCGAGAGATCAGAGTGTGTTGTTTGGGGAATACGAATGCTTTGGAGATGGAGCAAATTACAGTTCGAGAGTGCCATATTCAAAGCAGCTGAATCAAGTGGAAGCTCAACCCTACTTGGATGTTTCATATGTTGATGGAAATCAATGGCTCATCAATCAACAAATCACCACTTTGTCTACCATTTAATTTCAAATAAATCCTCAACTTAGTTTTCACCACATGGTTATTTGGATACAGTATATTATAATGAGGTTTCCAAACTCTTTACACATTTATGCCTTATAGTTTCAAAACTCCTCTAAAGTTATGGGTTGGATTTTTTTCT 1402 41.65 MRIKTNFFFWLYTLVIVALSITIALCSFSLPLTAIVATVGPHDGAFELGIFSSLVKESGLDELLSLMTQFVSKHHDQWKHKKSCDEKKWNFDLISLYNVSLTLTVDLKGCANFSSVQKAVDAVPEYGSSRTLILIDSGIYREKVVIEANKTNLIIQGQSYLNTAIEWNDTANSTGGTTYSSSVTIFASNFIAYNISFKNTAPEATPGIVGGQAVALRIAGDEAAFYGCGFYGAQDTLYDDKGRHYFKECFIQGSIDFIFGNARTLYDGCRIKSIAKEVLEGGVSGAITAQGRQTRNEETGFAFINCTINGSGKVWLGRAWGACATVVFSKTYMTDIVAADGWNDWRDPSRDQSVLFGEYECFGDGANYSSRVPYSKQLNQVEAQPYLDVSYVDGNQWLINQQITTLSTI 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 57665942 57668590 + XM_039049888.1 Bhi11g02033 50745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g02033 409 Pfam Pectinesterase 104 394 IPR000070 GO:0030599|GO:0042545
Bhi11g02033 409 PANTHER PECTINESTERASE 14-RELATED 14 403 - -
Bhi11g02033 409 Gene3D - 96 408 IPR012334 -
Bhi11g02033 409 SUPERFAMILY Pectin lyase-like 99 398 IPR011050 -
Bhi11g02033 409 ProSitePatterns Pectinesterase signature 2. 251 260 IPR033131 -
Bhi11g02033 409 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 14 403 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01093 Bhi-Chr1:20700152 Bhi11g02033 Bhi-Chr11:57665942 2.06E-80 dispersed
Bhi01g03027 Bhi-Chr1:75600407 Bhi11g02033 Bhi-Chr11:57665942 6.50E-132 dispersed
Bhi02g01951 Bhi-Chr2:52641539 Bhi11g02033 Bhi-Chr11:57665942 2.05E-99 dispersed
Bhi09g01744 Bhi-Chr9:47470445 Bhi11g02033 Bhi-Chr11:57665942 1.00E-81 dispersed
Bhi10g02000 Bhi-Chr10:50011460 Bhi11g02033 Bhi-Chr11:57665942 1.91E-79 dispersed
Bhi11g02033 Bhi-Chr11:57665942 Bhi12g00460 Bhi-Chr12:14785338 3.02E-81 dispersed
Bhi12g01504 Bhi-Chr12:48491337 Bhi11g02033 Bhi-Chr11:57665942 1.37E-71 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g02033 - - csv:101219157 730.709