Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g02097 ATAAAGAAAGAGAAAGAACAGCTCAGTTTTAAGAAGAGTCATGACCTTCCATCCTCAAATGGATGGTTTTTCATTTTCTGGGTGGAGCTTTACGCAATCCCCATTATACCCGCCACCCAACCTCCATTCCCCTTTCTCTCTCTTCTTCTCCCTCTCTCTCTCCTCTGTTCTTTTCCCCTTTTCCCCTTTTTCTTATCTTTTTCCTCTGTCATTTCATTCCAATTTCACCATCCCTTTCGTATATATCTTCTTCGTCTTGTATTTCCTTCATCTGGGTTTGTTTCTTTTCCGATTTTGACCCCAGATTCATTTCCATGGGTAACATTGGTAGTAGCGGTTCCAGTGGCCGGAGAAGGCACGGTAGTCGCCGGAGTCACCCAACTCCACCACCAGCAGCGCCACCCCAGCCTGAAATTACAAGTAATCGCTACGTTTTCGCTGCTGCTACGCCTTACCCAACGCAATACCCGAACCATCCGAATCATCCGCCCCCGTATTACCAGTATCCTGGTTACTTTCCACCGCCACCTGGTCCGCCGCCGTCGATGCCGATGCCTTTGCCGGCGCCTTACGATCACCACCACCGTGGAGGTCATCCCCAGATGGATCCCGCGCATTGGGTCGGTGGGAGATACCCTTATGGCCCTCCTATGCCGCCCCAAACGCCCTATGTTGAGCACCAGAAGGCGGTTACCATACGAAATGATGTTAATCTCAAGAAGGAAACTCTTAGAGTCGAACCTGATGAAGAAAATCCCGGCCAATTCCTTGTATCATTCACGTTTGATGCCACCGTTGCTGGGAGTATCACAATCTTCTTCTTTGCGAAAGAAGGTGAAGATTGCAACTTGACCGCTGTAAAAGAAGACATTTTTCAACCAGTAACTGTCCATTTCAAACAAGGGCTTGGACAGAAGTTCAGACAACCTTCTGGAACCGGAATAGATTTCTCAAAGTTTGAAGAGTCAGAGTTTCTGAAAGTGAATGACACAGATGTCTATCCTTTAGTTGTAAAAGCTGAGGCTTCCACCGACAGTCAAACTGGCCCTGATGGTACCGCGGTACCTGACCCCATGAATTCTCAGATAACACAAGCAATATTTGAGAAAGATAGAGGTGAATATCAGGTAAGAGTGTTGAAACAAATCCTGTGGGTCAATGGTATGAGATATGAGCTACAGGAGATATATGGCATTGGCAATTCAGTCGAGGGCGATGTGGATGGAAATGACCCTGGAAAGGAATGTGTCATTTGCTTGTCAGAGCCACGGGATACGACTGTCCTTCCCTGCCGACACATGTGTATGTGTAGTGGTTGTGCTAAGGTGCTAAGGTTCCAGACGAATCGATGCCCGATTTGTAGACAACCCGTCGATAGGCTCTTAGAGATAAGGGTCAGCAATGGGCCAGAAGAATAAAGAACAACGGTTCTACCATCGTCTCGCAGTTGAAGCAAACTCTGTACAGCACTGCGTTTATTGCATTTCTTTTTGCATCATCTGAATTGATTCCCTTTCGCCCTGAATTTTCTACCTGTTCTAAATAATCAAGAAAGGAAAGCGTTTAAGCTTATATCCAGCACATTGTGATATTGTGCCAGGGAAAAAGAAAAAGAAGGAAATTGTAAACAGTTGTACTTGTATTCTCATGATCAAAAGTGTCTGTAGAATTTATCTCTATTATATATACTTAAGCCGAGCCATGTTTTGTTTGTAATCAAATCCTTTGCCATTTCTTTGGTTTAATCATTTCTAACATC 1759 45.03 MVFHFLGGALRNPHYTRHPTSIPLSLSSSPSLSPLFFSPFPLFLIFFLCHFIPISPSLSYISSSSCISFIWVCFFSDFDPRFISMGNIGSSGSSGRRRHGSRRSHPTPPPAAPPQPEITSNRYVFAAATPYPTQYPNHPNHPPPYYQYPGYFPPPPGPPPSMPMPLPAPYDHHHRGGHPQMDPAHWVGGRYPYGPPMPPQTPYVEHQKAVTIRNDVNLKKETLRVEPDEENPGQFLVSFTFDATVAGSITIFFFAKEGEDCNLTAVKEDIFQPVTVHFKQGLGQKFRQPSGTGIDFSKFEESEFLKVNDTDVYPLVVKAEASTDSQTGPDGTAVPDPMNSQITQAIFEKDRGEYQVRVLKQILWVNGMRYELQEIYGIGNSVEGDVDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVDRLLEIRVSNGPEE 451
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 59421059 59424350 - XM_039048166.1 Bhi11g02097 50809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g02097 451 PANTHER MAHOGUNIN 85 451 IPR045194 GO:0061630
Bhi11g02097 451 CDD mRING-HC-C3HC5_MGRN1_like---blasttree 394 434 IPR045195 -
Bhi11g02097 451 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 380 444 IPR013083 -
Bhi11g02097 451 PANTHER RING/U-BOX SUPERFAMILY PROTEIN-RELATED 85 451 - -
Bhi11g02097 451 SMART ring_2 395 433 IPR001841 -
Bhi11g02097 451 SUPERFAMILY RING/U-box 394 440 - -
Bhi11g02097 451 Pfam Zinc finger, C3HC4 type (RING finger) 393 439 - -
Bhi11g02097 451 MobiDBLite consensus disorder prediction 87 118 - -
Bhi11g02097 451 ProSiteProfiles Zinc finger RING-type profile. 395 434 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00859 Bhi-Chr1:16256077 Bhi11g02097 Bhi-Chr11:59421059 5.05E-94 dispersed
Bhi11g02097 Bhi-Chr11:59421059 Bhi12g01615 Bhi-Chr12:52195931 7.55E-06 dispersed
Bhi11g02097 Bhi-Chr11:59421059 Bhi05g01797 Bhi-Chr5:57058970 1.96E-06 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g02097 - - csv:101216150 617.461