Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g02110 ACATGTTGGTTTTTGGTGTTTTCTTAAAAGCAAACAAAAGAGGGAAAAATCACACCTCAGATCTCCATTAGAAGAAAACACACACTCTCTTCTCTTCTTCTCTTCTCTTCTCATCATCATATATAAATTTTTTTTTTCTCTTCCAAAGGTCTTTTGTTCAGATTCAAAGTCTTCAAAACTTTGGTTTTTACTGTCTTTTGGCAGAACCCTAACAATTAGTCTCTTCCTCTCTTTTCCTTTGTCAACAGATCATCATCATCATCATTTTAACACAACCAAAATCCCTTCCCTCAAGTTTTTTTAGTTGTTTGTTTGCAGATTAAGAAAAATTTAAAAATCCCTTGGTCTTTTCTTGTTTGTTCTTGTCTAAACCATCTTCAATCACCTCCAAAATAAGAACCCAAAAACCAAAAAATTATGTCAACTAATCCCTTTTCTCTTCTCTCTTCTACTACAACTGCCTTTGCTCATCAGCACGACGATGCCAACCCTAACCCTAACCCTAAACCGAAACCCTCCGCTGCTACAAAGAAGAAGAGAAACCTCCCTGGAACCCCAGATCCCGATGCGGAAGTTATTGCTTTGTCGCCGAAATCGCTCATGGCAACGAATAGATTCATATGTGAAATTTGTAACAAGGGTTTTCAGAGAGACCAGAATCTGCAACTTCATCGACGAGGGCATAACTTACCATGGAAGTTGCGACAACGAACAAACAAGGAGCCGATCAAGAAGAAGGTGTATATTTGTCCAGAGAAGACCTGCGTACACCACGATCCGTCGCGAGCCCTCGGCGACCTCACCGGAATAAAGAAGCATTTCAGCCGGAAACACGGCGAGAAGAAGTGGAAATGTGACAAGTGTTCTAAGAAATATGCAGTTCAATCTGATTGGAAAGCTCACTCCAAAACTTGTGGGACTAGAGAATATAAGTGTGATTGTGGAACCCTTTTTTCCAGGAAAGATAGCTTCATAACCCACAGAGCATTTTGTGATGCTTTAGCTGAAGAAAGTGCAAGAATCACAACAGTTTCAGCTACAAATATTCTCAATAATCTTAGAAATGATTCAAATATTCTTCTTCACCAACAAGATCAATCTTTGATTGATCATCATACCAATAATACTCTTCAATCTCTTGGAGATATTTCTGGGCTTTCCCAATTCAATCATTCAGATCATTTCTTGAGAGATTTTGAAGATCATCAACACAAGAACAGATCTCCATTATCACTTTGGTTGAACCAAGCTTCAGCTGAAACTGCAATGAACAATCACAACAATAACAATAATAATATTTCCAACCTTTTTGGAGCTTCTTCTTCTTCTTCCAATCTTTTCGGATCCATAACCGAAAACGGGCTTTCGATGTTGCCAGTAATCGAGAAGGAAGATGTTGAGAATAAGGGAGGTAATAATTTGTCGAAAGCTACATCATCGTCGGCAGCGGCACTGTTGTCGGGTCAGTCTTCTCAGTCTGTTGTTTCGTCTTCTCCGATGTCGGCCACCGCCCTTCTGCAAAAGGCTGCTCTTATGGGCTCAACTAGAAGCAACAACAATAATAATTCCCCGCTCTTCGGTGCGGGTGCTTTTGGAGTAATGAGCTCTTCATCGTCGTCATCATCGTCTTCCAATGCAGTAAGCTTGAACTCTCTTAATAAATCTAGAAGCTTGACAATGGCTGACTCGGTTCAGATGATCGGTACCAACTCCGACTTAAGCTCGAATTGTCTCAGCCAGCTTCTAATACCACAGAACGGTAACAACGTTATGATTAGAAGTAGCGGTCAAACGAGGGACTTCCTCGGAGTTGGAGGAGGAGAAGCACCCCGACCGCCATTCCTTCCGCCGGAGCTAGCAAAATTTGCCACCATAAACTCAACAGTGGGATTAAGCCAATTCGCCGCCAACCACTAAAATCCCATCATCAAAGCCATCAAACTTAATCAAATCGGAAGGGCGGCGGAAACGGTCAGAAGGGGCCGACGGCGGGGGCCACCGGTGGATGTTTAAAGTTTGACAGTTCCAAAAAGCAGTAAAAATGGCCATGCATGTAAAACCTTTTTTTCTTTTTCTTCTTTTGCCTTTTGTTATTTTCTATGTTGTCGTTTGAACTTTTAAAATTTTTCTTTTTCCTTTCTTTTTGTAATTTCGCTTTCAAATTATTGCATTTGCCAGAGAAAACTATTTCTATATATAAATAAATATAAATATATATATGACTACTGGTCAAATTAATCT 2241 40.21 MSTNPFSLLSSTTTAFAHQHDDANPNPNPKPKPSAATKKKRNLPGTPDPDAEVIALSPKSLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKEPIKKKVYICPEKTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRKDSFITHRAFCDALAEESARITTVSATNILNNLRNDSNILLHQQDQSLIDHHTNNTLQSLGDISGLSQFNHSDHFLRDFEDHQHKNRSPLSLWLNQASAETAMNNHNNNNNNISNLFGASSSSSNLFGSITENGLSMLPVIEKEDVENKGGNNLSKATSSSAAALLSGQSSQSVVSSSPMSATALLQKAALMGSTRSNNNNNSPLFGAGAFGVMSSSSSSSSSSNAVSLNSLNKSRSLTMADSVQMIGTNSDLSSNCLSQLLIPQNGNNVMIRSSGQTRDFLGVGGGEAPRPPFLPPELAKFATINSTVGLSQFAANH 499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 59738075 59741397 - XM_039047264.1 Bhi11g02110 50822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g02110 499 MobiDBLite consensus disorder prediction 1 51 - -
Bhi11g02110 499 PANTHER ZINC FINGER PROTEIN JACKDAW 5 487 IPR033243 GO:0003700
Bhi11g02110 499 Pfam Zinc-finger double-stranded RNA-binding 67 89 IPR022755 -
Bhi11g02110 499 ProSitePatterns Zinc finger C2H2 type domain signature. 69 89 IPR013087 -
Bhi11g02110 499 ProSiteProfiles Zinc finger C2H2 type domain profile. 67 89 IPR013087 -
Bhi11g02110 499 Gene3D Classic Zinc Finger 119 201 - -
Bhi11g02110 499 Gene3D Classic Zinc Finger 46 118 - -
Bhi11g02110 499 MobiDBLite consensus disorder prediction 1 21 - -
Bhi11g02110 499 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 5 487 - -
Bhi11g02110 499 SUPERFAMILY beta-beta-alpha zinc fingers 66 164 IPR036236 -
Bhi11g02110 499 SMART c2h2final6 67 89 IPR013087 -
Bhi11g02110 499 SMART c2h2final6 144 164 IPR013087 -
Bhi11g02110 499 SMART c2h2final6 109 139 IPR013087 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi03g01682 Bhi11g02110 CCT
Bhi03g01682 Bhi11g02110 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g01105 Bhi-Chr9:25648364 Bhi11g02110 Bhi-Chr11:59738075 5.30E-108 dispersed
Bhi11g02110 Bhi-Chr11:59738075 Bhi11g02111 Bhi-Chr11:59738079 0 tandem
Bhi03g01276 Bhi-Chr3:26369233 Bhi11g02110 Bhi-Chr11:59738075 1.38E-112 transposed
Bhi08g01320 Bhi-Chr8:40147620 Bhi11g02110 Bhi-Chr11:59738075 1.42E-71 transposed
Bhi12g00981 Bhi-Chr12:29828061 Bhi11g02110 Bhi-Chr11:59738075 3.03E-73 transposed
Bhi11g02110 Bhi-Chr11:59738075 Bhi03g01682 Bhi-Chr3:35372763 1.13E-121 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2454 PF12171 zf-C2H2_jaz 7.30E-05 CL0361 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g02110 K25870 - csv:101213422 790.415