Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g02111 CATGTTGGTTTTTGGTGTTTTCTTAAAAGCAAACAAAAGAGGGAAAAATCACACCTCAGATCTCCATTAGAAGAAAACACACACTCTCTTCTCTTCTTCTCTTCTCTTCTCATCATCATATATAAATTTTTTTTTTCTCTTCCAAAGGTCTTTTGTTCAGATTCAAAGTCTTCAAAACTTTGGTTTTTACTGTCTTTTGGCAGAACCCTAACAATTAGTCTCTTCCTCTCTTTTCCTTTGTCAACAGATCATCATCATCATCATTTTAACACAACCAAAATCCCTTCCCTCAAGTTTTTTTAGTTGTTTGTTTGCAGATTAAGAAAAATTTAAAAATCCCTTGGTCTTTTCTTGTTTGTTCTTGTCTAAACCATCTTCAATCACCTCCAAAATAAGAACCCAAAAACCAAAAAATTATGTCAACTAATCCCTTTTCTCTTCTCTCTTCTACTACAACTGCCTTTGCTCATCAGCACGACGATGCCAACCCTAACCCTAACCCTAAACCGAAACCCTCCGCTGCTACAAAGAAGAAGAGAAACCTCCCTGGAACCCCAGATCCCGATGCGGAAGTTATTGCTTTGTCGCCGAAATCGCTCATGGCAACGAATAGATTCATATGTGAAATTTGTAACAAGGGTTTTCAGAGAGACCAGAATCTGCAACTTCATCGACGAGGGCATAACTTACCATGGAAGTTGCGACAACGAACAAACAAGGAGCCGATCAAGAAGAAGGTGTATATTTGTCCAGAGAAGACCTGCGTACACCACGATCCGTCGCGAGCCCTCGGCGACCTCACCGGAATAAAGAAGCATTTCAGCCGGAAACACGGCGAGAAGAAGTGGAAATGTGACAAGTGTTCTAAGAAATATGCAGTTCAATCTGATTGGAAAGCTCACTCCAAAACTTGTGGGACTAGAGAATATAAGTGTGATTGTGGAACCCTTTTTTCCAGGAAAGATAGCTTCATAACCCACAGAGCATTTTGTGATGCTTTAGCTGAAGAAAGTGCAAGAATCACAACAGTTTCAGCTACAAATATTCTCAATAATCTTAGAAATGATTCAAATATTCTTCTTCACCAACAAGATCAATCTTTGATTGATCATCATACCAATAATACTCTTCAATCTCTTGGAGATATTTCTGGGCTTTCCCAATTCAATCATTCAGATCATTTCTTGAGAGATTTTGAAGATCATCAACACAAGAACAGATCTCCATTATCACTTTGGTTGAACCAAGCTTCAGCTGAAACTGCAATGAACAATCACAACAATAACAATAATAATATTTCCAACCTTTTTGGAGCTTCTTCTTCTTCTTCCAATCTTTTCGGATCCATAACCGAAAACGGGCTTTCGATGTTGCCAGTAATCGAGAAGGAAGATGTTGAGAATAAGGGAGGTAATAATTTGTCGAAAGCTACATCATCGTCGGCAGCGGCACTGTTGTCGGGTCAGTCTTCTCAGTCTGTTGTTTCGTCTTCTCCGATGTCGGCCACCGCCCTTCTGCAAAAGGCTGCTCTTATGGGCTCAACTAGAAGCAACAACAATAATAATTCCCCGCTCTTCGGTGCGGGTGCTTTTGGAGTAATGAGCTCTTCATCGTCGTCATCATCGTCTTCCAATGCAGTAAGCTTGAACTCTCTTAATAAATCTAGAAGCTTGACAATGGCTGACTCGGTTCAGATGATCGGTACCAACTCCGACTTAAGCTCGAATTGTCTCAGCCAGCTTCTAATACCACAGAACGGTAACAACGTTATGATTAGAAGTAGCGGTCAAACGAGGGACTTCCTCGGAGTTGGAGGAGGAGAAGCACCCCGACCGCCATTCCTTCCGCCGGAGCTAGCAAAATTTGCCACCATAAACTCAACAGTGGGATTAAGCCAATTCGCCGCCAACCACTAAAATCCCATCATCAAAGCCATCAAACTTAATCAAATCGGAAGTGCAGGGCGGCGGAAACGGTCAGAAGGGGCCGACGGCGGGGGCCACCGGTGGATGTTTAAAGTTTGACAGTTCCAAAAAGCAGTAAAAATGGCCATGCATGTAAAACCTTTTTTTCTTTTTCTTCTTTTGCCTTTTGTTATTTTCTATGTTGTCGTTTGAACTTTTAAAATTTTTCTTTTTCCTTTCTTTTTGTAATTTCGCTTTCAAATTATTGCATTTGCCAGAGAAAACTATTTCTATATATAAATAAATATAAATATATATATGACTACTGGTCAAATTA 2241 40.29 MSTNPFSLLSSTTTAFAHQHDDANPNPNPKPKPSAATKKKRNLPGTPDPDAEVIALSPKSLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKEPIKKKVYICPEKTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRKDSFITHRAFCDALAEESARITTVSATNILNNLRNDSNILLHQQDQSLIDHHTNNTLQSLGDISGLSQFNHSDHFLRDFEDHQHKNRSPLSLWLNQASAETAMNNHNNNNNNISNLFGASSSSSNLFGSITENGLSMLPVIEKEDVENKGGNNLSKATSSSAAALLSGQSSQSVVSSSPMSATALLQKAALMGSTRSNNNNNSPLFGAGAFGVMSSSSSSSSSSNAVSLNSLNKSRSLTMADSVQMIGTNSDLSSNCLSQLLIPQNGNNVMIRSSGQTRDFLGVGGGEAPRPPFLPPELAKFATINSTVGLSQFAANH 499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 59738079 59741396 - XM_039047263.1 Bhi11g02111 50823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g02111 499 MobiDBLite consensus disorder prediction 1 51 - -
Bhi11g02111 499 PANTHER ZINC FINGER PROTEIN JACKDAW 5 487 IPR033243 GO:0003700
Bhi11g02111 499 Pfam Zinc-finger double-stranded RNA-binding 67 89 IPR022755 -
Bhi11g02111 499 ProSitePatterns Zinc finger C2H2 type domain signature. 69 89 IPR013087 -
Bhi11g02111 499 ProSiteProfiles Zinc finger C2H2 type domain profile. 67 89 IPR013087 -
Bhi11g02111 499 Gene3D Classic Zinc Finger 119 201 - -
Bhi11g02111 499 Gene3D Classic Zinc Finger 46 118 - -
Bhi11g02111 499 MobiDBLite consensus disorder prediction 1 21 - -
Bhi11g02111 499 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 5 487 - -
Bhi11g02111 499 SUPERFAMILY beta-beta-alpha zinc fingers 66 164 IPR036236 -
Bhi11g02111 499 SMART c2h2final6 67 89 IPR013087 -
Bhi11g02111 499 SMART c2h2final6 144 164 IPR013087 -
Bhi11g02111 499 SMART c2h2final6 109 139 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01682 Bhi-Chr3:35372763 Bhi11g02111 Bhi-Chr11:59738079 2.39E-119 dispersed
Bhi11g02111 Bhi-Chr11:59738079 Bhi10g01366 Bhi-Chr10:32807749 5.11E-113 dispersed
Bhi11g02110 Bhi-Chr11:59738075 Bhi11g02111 Bhi-Chr11:59738079 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2455 PF12171 zf-C2H2_jaz 7.30E-05 CL0361 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g02111 K25870 - csv:101213422 790.415