Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi11g02142 | TTTCCCGCCAAAATTGGACGAACACTTTGTTGAGACGAAACTGCCCGGAGATCATACGAAGAGAAGATAGGCATGGAGCAAACGTTTTCAGACTTCAACATTGCTGGAGATATCTTGGATTTATACTTTCCCCGAACTGTCTTCACTGTCGAAAATGGATGGCTTAACCTCATTTCTCAGCTCATTTTCTTTTTCTCTTCTCCGGCAGGTCGACATCTCTCTTCACAGGCTATCGATGATGGTCGTGGCATCTTTATTTTGTCAATTGACTTTCAACAGTTCCGGAAGATTTGCGATCGACGTGAGTTTTACATAATGCTAGAGGAAAATCCTAAAGTTGCTCTCAAATGTATGAGTGCTGCAATTCATCAGGTAATGAGGACCAAGTGGGTGCACAATTTAGAAGATGTCACAAAAATTCTAGTCCGATTGCACAACTATTCGGAATCTATGCTTGCTTTGAAGAACTTGAAGGCCGCATATATTGACAAGCTTGTATCAGTGCGTGGTACTGTTGTTAAAGTTAGCACTGTGAAGCCCTTGGTGGTGCAAATGAGCTTTGATTGTGCAAAGTGTAAAAGCAATATTACACGCATCTTTCCTGATGGTAAGTTTTCGCCTCCATCGTTTTGTGAGTTGGATGGGTGTAAAAGCAAAACATTCAATCCTATTCGATCGACCGCTGAAGCAATCGACTTTCAAAAAATACGATTGCAAGAACTCACTAAACCTGATGATCATGAAGAAGGCAGGGTGCCTCGAACTGTAGAATGTGAACTGACTGAAGACCTAGTTGACGCATGCATCCCTGGAGATGTTGTCACTGTTACTGGGATTATAAGAGTAATTAATAATTACATGGATATTGGAGGAGGAAAATCGAAGAGCAAAAACCAAGGATTTTACTATTTGTATCTGGAGGCCGTTTCAATAAAAAATTCCAAGTCACAGTCTACACCTGAGGAGTTGCAAGATTCCAATTCTAATGCAAGAGCAACCGAGTTGCTCGATTTATTCTCATTCTCCCCAAGAGATTTGGAATTTATTGTGAAATTCTCTGGGGAATGTGGTCCGGATGTCTTCCGTCAAATACTTCAATCCATTTGCCCATCCATCTATGGACATGAACTTGTTAAAGGTGATCCTGGACTTGGCAAAAGTCAACTACTGCAAGCGGCTGCAGCTGTTTCTCCACGTGGTATTTATGTTTGTGGTAATGCAACAACCAAGGCCGGCCTAACTGTAGCTGTTGTGAGGGATTCCATGACAAATGACTATGCTTTTGAGGCTGGGGCTATGGTACTTGCAGATGGTGGATTATGTTGCATAGATGAGTTCGATAAAATGTCTGCAGAACATCAGGCCCTACTGGAAGCCATGGAACAACAATGTGTATCAATTGCAAAAGCTGGACTGGTAGCAAGTCTATCAGCACGCACTTCTATTTTAGCTGCAGCTAACCCTGTTGGGGGTCATTACAACCGGGCGAAAACTGTGAATGAAAACTTGAAGATGAGTGCCGCTCTTCTCTCGAGATTTGATTTAGTTTTTATATTGCTGGACAAACCTGACGAATTTCTGGATAAGAGAGTCTCGGAGCACATCATATCGCTTCATGGTGGATGTGGGGAACGTGCGTCTGCAGCAAAAAGACTACGTAAAGATATATCTCCTTTGGCTTTAAAGAATGTAGTAACGGAGAATGACGGAAAAGGAGATGTTGGGTCAAAACGTGAGTCTTTAGTTTCAAGACTGAGATTGGACAAAGCGAAAGACGGCGATTTTGTACCATTACCTGGTCAACTTCTGCGCAAATATATAGCATATGCAAGAACTTTTGTGTTCCCCAGGATGTCAAAGCCCGCAGCAGACATCTTGCAGAAATTTTATTTAAAACTGCGTGACGAGAATACATCAGGGGATGGTACGCCAATTACAGCTAGACAGCTGGAAAGTTTGGTGAGGCTGGCAGAAGCTCGAGCACGGGTCGACCTCAGGGAAGAAATTACAGTACAAGATGCCATGGATGTGGTGGAAATAATGAAGGAATCCCTTTATGACAAGTACGTAGATGAACATGGGGTCCTGGATTTTGGTCGAAGTGGGGGAATGAGTAAACAGAAAGAAGCCAAGCGATTTCTGAGTGCACTCAACAAGCAATCAGAGTTGCAGCAGAAAGACTGTTTCTCTATCTCGGAAATATATAGCTTAGCAGATAAAATTGGCCTACGAGTACCTGACATTGATACCTTCATAGAAAATCTTAACAGTGTTGGATATCTGCTTAAGAAGGGGCCAAAGACATTCCAGGTTCTGTCCTCATCGTACACCAGTCAATCGACAAGGTCAAGAGGATAAAAATTGGGCGATAAGAGAGGGCCATCGTCCGGTGAAGCGGCGAGGCGGCTGACGACGGCGCTCCACGCTTTCACGTGGGGAAGGTAACCGGAACGAAGCATGGACTTAATGACAGAACAGGCGTAAAGAGTGTGTCCAGCCTTGGCGGCTGC | 2510 | 43.63 | MEQTFSDFNIAGDILDLYFPRTVFTVENGWLNLISQLIFFFSSPAGRHLSSQAIDDGRGIFILSIDFQQFRKICDRREFYIMLEENPKVALKCMSAAIHQVMRTKWVHNLEDVTKILVRLHNYSESMLALKNLKAAYIDKLVSVRGTVVKVSTVKPLVVQMSFDCAKCKSNITRIFPDGKFSPPSFCELDGCKSKTFNPIRSTAEAIDFQKIRLQELTKPDDHEEGRVPRTVECELTEDLVDACIPGDVVTVTGIIRVINNYMDIGGGKSKSKNQGFYYLYLEAVSIKNSKSQSTPEELQDSNSNARATELLDLFSFSPRDLEFIVKFSGECGPDVFRQILQSICPSIYGHELVKGDPGLGKSQLLQAAAAVSPRGIYVCGNATTKAGLTVAVVRDSMTNDYAFEAGAMVLADGGLCCIDEFDKMSAEHQALLEAMEQQCVSIAKAGLVASLSARTSILAAANPVGGHYNRAKTVNENLKMSAALLSRFDLVFILLDKPDEFLDKRVSEHIISLHGGCGERASAAKRLRKDISPLALKNVVTENDGKGDVGSKRESLVSRLRLDKAKDGDFVPLPGQLLRKYIAYARTFVFPRMSKPAADILQKFYLKLRDENTSGDGTPITARQLESLVRLAEARARVDLREEITVQDAMDVVEIMKESLYDKYVDEHGVLDFGRSGGMSKQKEAKRFLSALNKQSELQQKDCFSISEIYSLADKIGLRVPDIDTFIENLNSVGYLLKKGPKTFQVLSSSYTSQSTRSRG | 761 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 60070667 | 60079490 | + | XM_039048051.1 | Bhi11g02142 | 50854 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi11g02142 | 761 | Coils | Coil | 419 | 439 | - | - | |
| Bhi11g02142 | 761 | Pfam | MCM AAA-lid domain | 578 | 661 | IPR041562 | - | |
| Bhi11g02142 | 761 | Pfam | MCM P-loop domain | 354 | 515 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Bhi11g02142 | 761 | Gene3D | - | 130 | 260 | IPR012340 | - | |
| Bhi11g02142 | 761 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 347 | 362 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Bhi11g02142 | 761 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 407 | 421 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Bhi11g02142 | 761 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 434 | 447 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Bhi11g02142 | 761 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 458 | 470 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Bhi11g02142 | 761 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 485 | 493 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Bhi11g02142 | 761 | SMART | mcm | 126 | 662 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
| Bhi11g02142 | 761 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER | 356 | 756 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
| Bhi11g02142 | 761 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER | 7 | 355 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
| Bhi11g02142 | 761 | Gene3D | - | 314 | 670 | IPR027417 | - | |
| Bhi11g02142 | 761 | PANTHER | DNA HELICASE MCM8 | 356 | 756 | - | - | |
| Bhi11g02142 | 761 | PANTHER | DNA HELICASE MCM8 | 7 | 355 | - | - | |
| Bhi11g02142 | 761 | Pfam | MCM OB domain | 130 | 259 | IPR033762 | - | |
| Bhi11g02142 | 761 | ProSiteProfiles | MCM family domain profile. | 353 | 511 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Bhi11g02142 | 761 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 335 | 667 | IPR027417 | - | |
| Bhi11g02142 | 761 | Gene3D | - | 157 | 207 | - | - | |
| Bhi11g02142 | 761 | SUPERFAMILY | Nucleic acid-binding proteins | 59 | 260 | IPR012340 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi11g02142 | Bhi-Chr11:60070667 | Bhi05g00892 | Bhi-Chr5:30690289 | 1.19E-61 | dispersed | |
| Bhi11g02141 | Bhi-Chr11:60070667 | Bhi11g02142 | Bhi-Chr11:60070667 | 0 | tandem | |
| Bhi11g02142 | Bhi-Chr11:60070667 | Bhi11g02143 | Bhi-Chr11:60071411 | 0 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi11g02142 | K10737 | - | csv:101211972 | 1394.79 |