Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g02146 AATAAAAAGCGCTTTGGTTTTTGCCCTTTTCCTCTTCTGAATTTGCCCTGAAAAAGGGAAAAACAAAAACGAACGGTGCTGATAAACTTGATTCTCTCATCTCAGTCGTCTCCTTGCTCCTATCTTCACCATCGTCCGATTCCATTCCACCACTCCATTTCCACCCGATCTAATTCCTTCTCTCTCGCGCCCAAATTACAAATCTTCCGTTTTCTCCCACCAGGGTTTTGGTTTGAAAATGGCTGATGCTCCGGCGAGTCCCGGCGGAGGAAGCCATGAGAGCGGTGAGCAGAGTCCGAGGTCTAATGTTCGTGAACAGGATAGGTTTCTTCCTATTGCGAATATTAGCAGGATCATGAAGAAGGCTCTTCCTGCTAATGGAAAGATTGCCAAGGATGCTAAAGAAACCGTACAAGAATGTGTATCGGAGTTTATCAGTTTTATTACCAGCGAGGCAAGTGATAAATGTCAAAGAGAGAAACGGAAGACGATTAATGGAGATGATTTACTTTGGGCCATGGCCACTCTTGGATTTGAGGATTATATCGATCCACTTAAAACCTACTTGACGAAATACAGAGAGACGGAGGGTGACACTAAGGGGTCTGCTAAAGGTGGTGATGCGTCAGCTAAGAAAGAAGCTCATCCAACCTCTATTTCCCAGATTGCTCATCAAGGGTCGTTTTCCCAAGGAGTTAATTATGCAAGTTCTCAATCACAAGCCCAGCATCTGATGGTACCTATGCAAGGTACTGAATGAATTTGCCTCGAATCGACCATGTAAACTGTTGAATTTGGAGATCTTTGCTCAGCATAACAGCAAAATTTGAGTCTATTTATTTGAAGTTTGGGTGGTTTTGATACTGTTATTGTAGAAACAGTTGAAACTTTGTATATTATTATGGCTGTCTATTGGATTGGAGTTAGGACGCTGTATTTAATAGAGGTTCCAAGTCCTGGGGATCCCATTTATTCATGACTTGTAAACCTTACAACCTTTGGCAGGGTCTTGAAGATCTTGAAAAAGACTTAGTAGCAGTAGCACCCTTTGGATTTTTTTCCCCTTTTTTTTGTTCAGAATCATTTTCCTAATCAAAACAATAAATTGTGCCAGGAATGATTTGCTTCTAGAA 1133 41.57 MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDTKGSAKGGDASAKKEAHPTSISQIAHQGSFSQGVNYASSQSQAQHLMVPMQGTE 173
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 60103939 60107726 - XM_039050162.1 Bhi11g02146 50858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g02146 173 PRINTS CCAAT-binding transcription factor subunit A signature 58 76 - -
Bhi11g02146 173 PRINTS CCAAT-binding transcription factor subunit A signature 77 95 - -
Bhi11g02146 173 PRINTS CCAAT-binding transcription factor subunit A signature 96 114 - -
Bhi11g02146 173 SUPERFAMILY Histone-fold 27 131 IPR009072 GO:0046982
Bhi11g02146 173 Gene3D Histone, subunit A 17 162 IPR009072 GO:0046982
Bhi11g02146 173 MobiDBLite consensus disorder prediction 117 173 - -
Bhi11g02146 173 ProSitePatterns NF-YB/HAP3 subunit signature. 61 77 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bhi11g02146 173 MobiDBLite consensus disorder prediction 135 173 - -
Bhi11g02146 173 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 30 94 IPR003958 -
Bhi11g02146 173 MobiDBLite consensus disorder prediction 1 28 - -
Bhi11g02146 173 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 158 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bhi11g02146 173 MobiDBLite consensus disorder prediction 117 132 - -
Bhi11g02146 173 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED 1 158 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g02146 Bhi-Chr11:60103939 Bhi11g02147 Bhi-Chr11:60104399 3.64E-118 tandem
Bhi01g02444 Bhi-Chr1:60200847 Bhi11g02146 Bhi-Chr11:60103939 5.71E-59 transposed
Bhi02g02094 Bhi-Chr2:56760236 Bhi11g02146 Bhi-Chr11:60103939 4.44E-35 transposed
Bhi11g00447 Bhi-Chr11:10813050 Bhi11g02146 Bhi-Chr11:60103939 8.39E-57 transposed
Bhi11g00479 Bhi-Chr11:11348114 Bhi11g02146 Bhi-Chr11:60103939 1.81E-46 transposed
Bhi11g02146 Bhi-Chr11:60103939 Bhi07g01026 Bhi-Chr7:33549773 1.55E-83 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2457 PF00808 CBFD_NFYB_HMF 7.80E-28 CL0012 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g02146 K08065 - csv:101212699 330.487