Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g02193 GTATTTTTTTTTTCTTTTAATACTAAGTTCGGTTAGTAAGATAATATTAATATTTCAGCCTAATATGCCATGAGTAAATTGGGATCCACATAAAAAGGTTTATATCTCTCTCTCTCCGAAGTGAAAGACCAATACACTCGCGAGATTCCATAATGGAAAAATTAGAACCCCCCACTGTCATTATGGCCGCCCTCTCCGCCCTCTCTCCGCCTTCTCTCTCCGATCTCTCCCACTCCATCTTCTCCGACATTCACCTCCACCGCCGCCGCCTCACCTTCATCCTCTCTTCCCCAACCCTCTTCTCCCTCACTCTCCGCCACCTCAATTCCCTCTCTCTCTCCCACAAATCTCTCCTCCTTGCCCGCTTCCTCCTCTCCACCCTCCGCCGCCTCTCCTGCCCCTTCCAGTCACAATCCAAACTCTTCCCGCACCACCCTTCCACCGCCACCATCTCCCCTCAAGACCTCGACGCCGCCGTCCTCCTCCTCCTCCTCTGCGAGGTTCGGCAGCACAATCCAGCCGCCCTCCGAACTCCGATCACCAAATGGCGTGCGACCCTCTGTAGAATCTACTCCGATTCCCTTTTAACGATCTCCGGAATCGCCACCGGGGGGGGCGGAGCTTTGATTCCGTACATTGAGACGGTTGTGAGGTGTTGGAAATTCGTGGGGTTTGTTGGGAGTTGCGGAGGGAAGGCCAGGAGAGAGGTGGCGGCGTCGCCTGTGGCGGTGGTGGAACTGCCGTCAGTGGCGGTGGGTGGTGGCGGTGCGTTGGTGGAATGTGTGATTTGTAAAGAGGAGATGGTAGAAGGAAGAGACGCGTGTAAATTGCCTTGTGACCACTTATTCCATTGGCTCTGTATTTTGCCATGGCTGAGGAAGAGGAACACGTGTCCCTGTTGCAGGTTTCAGCTTCCCACTGATGATATATTCGGAGAGATCCAACGGCTGTGGGAGATCCTCCTCAAGGTGGGCTCCACGATGTGTACATCTGATGGAGATTGACGTCCAAGATTGAGCGGTTTCATGGA 1030 53.4 MEKLEPPTVIMAALSALSPPSLSDLSHSIFSDIHLHRRRLTFILSSPTLFSLTLRHLNSLSLSHKSLLLARFLLSTLRRLSCPFQSQSKLFPHHPSTATISPQDLDAAVLLLLLCEVRQHNPAALRTPITKWRATLCRIYSDSLLTISGIATGGGGALIPYIETVVRCWKFVGFVGSCGGKARREVAASPVAVVELPSVAVGGGGALVECVICKEEMVEGRDACKLPCDHLFHWLCILPWLRKRNTCPCCRFQLPTDDIFGEIQRLWEILLKVGSTMCTSDGD 283
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 60568053 60569082 - XM_039049870.1 Bhi11g02193 50905
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g02193 283 Pfam Ring finger domain 209 251 IPR001841 -
Bhi11g02193 283 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 204 261 IPR013083 -
Bhi11g02193 283 ProSiteProfiles Zinc finger RING-type profile. 210 251 IPR001841 -
Bhi11g02193 283 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SGR9, AMYLOPLASTIC 4 279 - -
Bhi11g02193 283 SUPERFAMILY RING/U-box 209 257 - -
Bhi11g02193 283 SMART ring_2 210 250 IPR001841 -
Bhi11g02193 283 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 4 279 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g02193 Bhi-Chr11:60568053 Bhi06g00302 Bhi-Chr6:6814030 8.38E-15 dispersed
Bhi11g02193 Bhi-Chr11:60568053 Bhi06g00971 Bhi-Chr6:26605446 3.54E-13 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g02193 - - csv:101209757 465.692