Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi11g02193 | GTATTTTTTTTTTCTTTTAATACTAAGTTCGGTTAGTAAGATAATATTAATATTTCAGCCTAATATGCCATGAGTAAATTGGGATCCACATAAAAAGGTTTATATCTCTCTCTCTCCGAAGTGAAAGACCAATACACTCGCGAGATTCCATAATGGAAAAATTAGAACCCCCCACTGTCATTATGGCCGCCCTCTCCGCCCTCTCTCCGCCTTCTCTCTCCGATCTCTCCCACTCCATCTTCTCCGACATTCACCTCCACCGCCGCCGCCTCACCTTCATCCTCTCTTCCCCAACCCTCTTCTCCCTCACTCTCCGCCACCTCAATTCCCTCTCTCTCTCCCACAAATCTCTCCTCCTTGCCCGCTTCCTCCTCTCCACCCTCCGCCGCCTCTCCTGCCCCTTCCAGTCACAATCCAAACTCTTCCCGCACCACCCTTCCACCGCCACCATCTCCCCTCAAGACCTCGACGCCGCCGTCCTCCTCCTCCTCCTCTGCGAGGTTCGGCAGCACAATCCAGCCGCCCTCCGAACTCCGATCACCAAATGGCGTGCGACCCTCTGTAGAATCTACTCCGATTCCCTTTTAACGATCTCCGGAATCGCCACCGGGGGGGGCGGAGCTTTGATTCCGTACATTGAGACGGTTGTGAGGTGTTGGAAATTCGTGGGGTTTGTTGGGAGTTGCGGAGGGAAGGCCAGGAGAGAGGTGGCGGCGTCGCCTGTGGCGGTGGTGGAACTGCCGTCAGTGGCGGTGGGTGGTGGCGGTGCGTTGGTGGAATGTGTGATTTGTAAAGAGGAGATGGTAGAAGGAAGAGACGCGTGTAAATTGCCTTGTGACCACTTATTCCATTGGCTCTGTATTTTGCCATGGCTGAGGAAGAGGAACACGTGTCCCTGTTGCAGGTTTCAGCTTCCCACTGATGATATATTCGGAGAGATCCAACGGCTGTGGGAGATCCTCCTCAAGGTGGGCTCCACGATGTGTACATCTGATGGAGATTGACGTCCAAGATTGAGCGGTTTCATGGA | 1030 | 53.4 | MEKLEPPTVIMAALSALSPPSLSDLSHSIFSDIHLHRRRLTFILSSPTLFSLTLRHLNSLSLSHKSLLLARFLLSTLRRLSCPFQSQSKLFPHHPSTATISPQDLDAAVLLLLLCEVRQHNPAALRTPITKWRATLCRIYSDSLLTISGIATGGGGALIPYIETVVRCWKFVGFVGSCGGKARREVAASPVAVVELPSVAVGGGGALVECVICKEEMVEGRDACKLPCDHLFHWLCILPWLRKRNTCPCCRFQLPTDDIFGEIQRLWEILLKVGSTMCTSDGD | 283 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 60568053 | 60569082 | - | XM_039049870.1 | Bhi11g02193 | 50905 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi11g02193 | 283 | Pfam | Ring finger domain | 209 | 251 | IPR001841 | - | |
| Bhi11g02193 | 283 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 204 | 261 | IPR013083 | - | |
| Bhi11g02193 | 283 | ProSiteProfiles | Zinc finger RING-type profile. | 210 | 251 | IPR001841 | - | |
| Bhi11g02193 | 283 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE SGR9, AMYLOPLASTIC | 4 | 279 | - | - | |
| Bhi11g02193 | 283 | SUPERFAMILY | RING/U-box | 209 | 257 | - | - | |
| Bhi11g02193 | 283 | SMART | ring_2 | 210 | 250 | IPR001841 | - | |
| Bhi11g02193 | 283 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 4 | 279 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi11g02193 | Bhi-Chr11:60568053 | Bhi06g00302 | Bhi-Chr6:6814030 | 8.38E-15 | dispersed | |
| Bhi11g02193 | Bhi-Chr11:60568053 | Bhi06g00971 | Bhi-Chr6:26605446 | 3.54E-13 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi11g02193 | - | - | csv:101209757 | 465.692 |