Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g02203 AGCCCTCATTTTCGTCATTCTATTAGAAACGAAAAAACAGTTCACAAAATCAAACCCTAAAACTGATTCGTTTTTCAGATTAGGTGATCGTAAAATGCCGAGAAAAGGAATGAGGAGTCTCCTTTTCCAGTTCTCGTCGCCGTCGAATTCCATTTCTCGGTATTCGATCGCATCGCCGTCGAGAACTCCGGCCTTGACTCCACGCCGGAGCTTCAACGACGCGATGATTGAACAGAGCGTCGAATCTGCGGCGGCGATTATAATGAAATGGAATCCAGATTCTTCAACTTACGCTAAAGTTACTTCCATGTTCTATGAAGACAAAAAAGAAGCCATGCAGTTCATTAAGCGCGTGAATGATCTTCAAAAAGCGATGCATCTTATGGCTTCGGAAGATTCCGCTTCCGCTTCTGATCGCCTTGTTTACGCTCAAGGTTTGATGGAAATCGCCATGAAAAGGCTTCAGAAGGAGTTTTATCAGATTCTCTCCATGAATCGTGCTCATCTAGATCCGGAATCTGTTTCCACTAGATCCTCTCGCTGCTCCACCAGATCGAGTACTTCCGTTGATTTCGACGATGACGGAACCCTAGACGATGAAATCCAAGCCGTAGACGATTCGATCTCTGAAGTTGAACAAGTTTCATTTATTGTAATGGAGGATTTGCGAGCCATAGCCGAGTGCATGATCTCCTCTGGCTACGCTAAAGAGTGCGTTAATATGTACAAAGTGATTCGTAAATCGATTATCGATGAAGGTGTATACCGCCTCGGACTTGAGAAATTGAGCGCTTCGAGAATCAACAAGATGGATTGGGAGGTGCTTGATCTTAAAATCAAGAACTGGTTGGATGCAATTAAACTCGCAATTAGAACACTGTTCGTTGGTGAACGAATTCTCTGCGATCATGTCTTTTCCTCTTCTGAATCCATTAGAGAATCCTGTTTTGCTGATATATCCAGAGAAGGCGCTCTGCTTCTGTTTGGATTCCCCGAACTTGTTGCAAAGAGTAAAAAATCTCCGGAAAAAATGTTCCGTGTTCTTGATATGTACTCATCAATCGTCGAAAATTGGCCGGACATCGAATCGATTTTCTCATCTGAATCCTCATCTGTAGTTCGATCTCAAGCTCTAACCTCACTCGCAAAACTCGGCGAGTTAGTTCGTGCCATAGTTATGGATCTCGAATTCTCGATTCAGAAAAATTCATCCAAATCACCGGTCGCTGGCGGCGGCGTTCATTCCTTAACGCTTCTCTCGATGAACTACCTCACTTTCCTCGCCGATTACGGAAATATTTTGACGGATATTTTCGCCGATTGGACACCGCCTGAAAAATCCTCTCTCGAACAAATCTTCTTCAACACTTCAGATCAATCCGATGATTCTTCAACGGCTTCAGCAATCTCTTTACGATTGGGATGGCTAATTCTTGTCCTTCTCTGCAAACTCGACAGTAAAGCAAAACGCTACAAAGACGTTTCACTCTCGTATCTGTTCCTCGCTAACAATCTTCAACACATCGTCTCTAAAGTCCGATCGTCGAATCTTCAGTATCTTCTCGGCGATGAATGGATCGCAAAGCAGGAGGCGAAAGTAAGGCAATTCGCGGCGAAGTACGAAGCATTAGCTTGGGGAAGAGTCTTAGATTCCTTGCCGGAGAATCCAACTGAGAAATTCTCACAGGAAGAAGCCAAAGAAATCTTCAGGAACTTTAATATGGCATTCCAAGAAACTCATCGGAAACAGAAATCCTGCTTCATTCCCGATTCAAAGCTTAGAGACGAAGTTAAATTATCAATCGGAAGAAAGCTCGTTTGGTTCTATGGAGAATTTTATAGAGCGCAAAAAGCTTATGCCGGTGCTAATGAAAAGCCGTACATCAGATTCTCGCCGGAAGATATCGGTAACTACCTTTCAGATCTCTATTTTGAACCGTCCGATTGGGGGAGTGTTTCTACCTCCTCGCCGTCGTCTACCTCATCCTCTCACCGGCGGGAACCGGGACCCCGTTGATCGCTGCTCCGGCACGCGAATATTTTTATTTTTAATTTTAATTTTGTTTTTGTTTTTAACTTTACATATCTTTTATTTTCCCTCCGAATTTTGGATGCGCATGTGAAAGTTGTAACGGTAAATAATACACGGATTTAGTAATGTTTTGACATTTTGATCATAAAAGTTGAATAAATTTGCTACATAATGACTTTTTGATTTC 2219 42.81 MPRKGMRSLLFQFSSPSNSISRYSIASPSRTPALTPRRSFNDAMIEQSVESAAAIIMKWNPDSSTYAKVTSMFYEDKKEAMQFIKRVNDLQKAMHLMASEDSASASDRLVYAQGLMEIAMKRLQKEFYQILSMNRAHLDPESVSTRSSRCSTRSSTSVDFDDDGTLDDEIQAVDDSISEVEQVSFIVMEDLRAIAECMISSGYAKECVNMYKVIRKSIIDEGVYRLGLEKLSASRINKMDWEVLDLKIKNWLDAIKLAIRTLFVGERILCDHVFSSSESIRESCFADISREGALLLFGFPELVAKSKKSPEKMFRVLDMYSSIVENWPDIESIFSSESSSVVRSQALTSLAKLGELVRAIVMDLEFSIQKNSSKSPVAGGGVHSLTLLSMNYLTFLADYGNILTDIFADWTPPEKSSLEQIFFNTSDQSDDSSTASAISLRLGWLILVLLCKLDSKAKRYKDVSLSYLFLANNLQHIVSKVRSSNLQYLLGDEWIAKQEAKVRQFAAKYEALAWGRVLDSLPENPTEKFSQEEAKEIFRNFNMAFQETHRKQKSCFIPDSKLRDEVKLSIGRKLVWFYGEFYRAQKAYAGANEKPYIRFSPEDIGNYLSDLYFEPSDWGSVSTSSPSSTSSSHRREPGPR 640
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 60768926 60771144 - XM_039050228.1 Bhi11g02203 50915

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g02203 640 Pfam Exo70 exocyst complex subunit 249 610 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bhi11g02203 640 PANTHER EXOCYST COMPLEX PROTEIN EXO70 5 623 IPR004140 GO:0000145|GO:0006887
Bhi11g02203 640 MobiDBLite consensus disorder prediction 617 640 - -
Bhi11g02203 640 Gene3D Exocyst complex component Exo70 55 617 - -
Bhi11g02203 640 SUPERFAMILY Cullin repeat-like 53 612 IPR016159 -
Bhi11g02203 640 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 5 623 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g02203 K07195 EXOC7, EXO70; exocyst complex component 7 - csv:101208543 1121.3
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01623 Bhi-Chr3:34318579 Bhi11g02203 Bhi-Chr11:60768926 7.37E-173 dispersed
Bhi08g00343 Bhi-Chr8:13717469 Bhi11g02203 Bhi-Chr11:60768926 0 dispersed
Bhi11g02203 Bhi-Chr11:60768926 Bhi01g02900 Bhi-Chr1:71888657 5.70E-100 dispersed
Bhi10g00657 Bhi-Chr10:14435507 Bhi11g02203 Bhi-Chr11:60768926 0 wgd
Bhi11g02203 Bhi-Chr11:60768926 Bhi03g01622 Bhi-Chr3:34318579 8.62E-168 wgd
Bhi11g02203 Bhi-Chr11:60768926 Bhi07g00980 Bhi-Chr7:32480822 1.88E-178 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi07g00686 . 12 653 EXO70 exocyst subunit family AT5G03540 75.3 6.3e-280 960.7
Bhi03g01779 . 1 638 EXO70 exocyst subunit family AT5G03540 70.7 4.9e-264 907.9
Bhi03g01779 . 1 638 EXO70 exocyst subunit family AT5G52340 79.3 2.3e-295 1011.9
Bhi07g00686 . 14 653 EXO70 exocyst subunit family AT5G52340 74.1 7.4e-270 927.2
Bhi03g01779 . 145 631 EXO70 exocyst subunit family AT5G52350 63.5 2.2e-175 613.2
Bhi07g00686 . 149 653 EXO70 exocyst subunit family AT5G52350 58.7 1.5e-163 573.9
Bhi08g00441 . 1 623 EXO70 exocyst subunit family AT5G58430 67.2 1.3e-247 853.2
Bhi08g00441 . 1 622 EXO70 exocyst subunit family AT1G07000 52.4 2.1e-173 606.7
Bhi01g03318 . 60 673 EXO70 exocyst subunit family AT5G13150 52.8 8.4e-176 614.8
Bhi12g01225 . 105 716 EXO70 exocyst subunit family AT5G13990 54.5 3.4e-191 666.0
Bhi01g02900 . 9 609 EXO70 exocyst subunit family AT1G72470 65.0 1.6e-216 750.0
Bhi01g02900 . 9 607 EXO70 exocyst subunit family AT1G54090 62.2 2.5e-209 726.1
Bhi01g02900 . 9 608 EXO70 exocyst subunit family AT3G14090 63.9 5.0e-218 755.0
Bhi08g01486 . 18 657 EXO70 exocyst subunit family AT5G50380 62.2 9.3e-226 780.8
Bhi04g01091 . 13 682 EXO70 exocyst subunit family AT4G31540 73.9 2.5e-295 1011.9
Bhi07g00980 . 58 614 EXO70 exocyst subunit family AT3G55150 50.5 3.2e-148 523.1
Bhi07g00980 . 31 613 EXO70 exocyst subunit family AT2G39380 50.6 4.8e-152 535.8
Bhi11g02203 . 27 631 EXO70 exocyst subunit family AT3G09520 54.8 1.7e-178 623.6
Bhi10g00657 CCT 35 608 EXO70 exocyst subunit family AT5G59730 50.4 7.4e-153 538.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007378 1 1 2 1 2 1 0 1 1 1 2 1 1 1 1 1 1 2 1 1 1 1 2 1 1 1 2 2 1 1 36