Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g02352 TGTACATAAAATCCTCACTCACTTCTTCTAAATAAAAAAGAAAAAGAAAAATGTCCATAAAAAACATCTCTCCTGACTTCCATCAACCTCTCTTCTCTACTCCCCAACTTCCCATCATGCTTAACCAAAAGTCCTCCCTCTCCGTCGCCGCCGCCGCCGCCGCCGACCACCTCCCCATGTTTGAAAAACCCTTAACACCCAGCGACGTTGGCAAGCTCAACCGTCTCGTCATCCCCAAGCAATACGCCGAAAAATACTTCCCCCTCTCCCCCTCCGCCGCGGTCGTCGCCGCAGCCGCCGGCGACTCTGCCGATAAAGGGTTACTCCTCAGCTTCGAAGATGAGTCCGGCAAGATATGGCGGTTCCGTTACTCTTATTGGAATAGTAGTCAGAGCTATGTGCTGACGAAGGGGTGGAGCCGATTTGTCAAAGAGAAGCGCCTTGACGCCGGAGATGTCGTCGTTTTTGAACGCCACCGCCGTGATGGTGATAGGTTGTTTATTGGGTGGAAGAAGAGGTCGGCGCCGTCTCCAGCAGACACTGCCCAGGCTGCTGCGAGTGGCGGTGTTGGCGGTGGTGGAGGTTGGACTAAAATGTTCTGTTCTGCAAATCCATATTCTTCTTCTCATCATCATCATCATCATCATTTTCCTTCTCCGCCATACCAATCTTCTTCTGATTCTCCTCATGCAGAGTCCTCTGTTCAGAGTCAAACAATGTCGGTTGGGAATTCAAAGATACTGCGGCTGTTCGGAGTGGACTTGGAGTGCCAAACCGACATGTCCGAACCCGAACCACCGTCGACGCTCAATGTCGGGTCAAATTTAAGTTTATCGGTTCGAGATCCAACCCGCCACACCTTCTATACACATTATTCTTCTCCTCTTCCTCATCACATGGATTTCACTTTCTCACAAGATGTCAAGCAGACGAAATATCAAGGATAGAGATGGGTGGATGTGACGTCCCTGTACTGCAAAACCCACTTTTTTTTAAAAAAAAAAAAAAAAATTATTTAATCAAAATCCCCACCACTTCAGTTCAAAATGTCGCCCCATTAAAGAAGGGGAAAACAGAGGGCAAAAAAAAAAAAAAAAAAAAAA 1103 47.6 MSIKNISPDFHQPLFSTPQLPIMLNQKSSLSVAAAAAADHLPMFEKPLTPSDVGKLNRLVIPKQYAEKYFPLSPSAAVVAAAAGDSADKGLLLSFEDESGKIWRFRYSYWNSSQSYVLTKGWSRFVKEKRLDAGDVVVFERHRRDGDRLFIGWKKRSAPSPADTAQAAASGGVGGGGGWTKMFCSANPYSSSHHHHHHHFPSPPYQSSSDSPHAESSVQSQTMSVGNSKILRLFGVDLECQTDMSEPEPPSTLNVGSNLSLSVRDPTRHTFYTHYSSPLPHHMDFTFSQDVKQTKYQG 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 63753416 63756845 - XM_039049931.1 Bhi11g02352 51064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g02352 298 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 37 250 IPR044800 GO:0003700
Bhi11g02352 298 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0156000 37 250 - -
Bhi11g02352 298 Gene3D - 33 166 IPR015300 -
Bhi11g02352 298 ProSiteProfiles B3 DNA-binding domain profile. 44 157 IPR003340 GO:0003677
Bhi11g02352 298 MobiDBLite consensus disorder prediction 202 223 - -
Bhi11g02352 298 CDD B3_DNA 42 146 IPR003340 GO:0003677
Bhi11g02352 298 Pfam B3 DNA binding domain 44 156 IPR003340 GO:0003677
Bhi11g02352 298 SUPERFAMILY DNA-binding pseudobarrel domain 40 156 IPR015300 -
Bhi11g02352 298 MobiDBLite consensus disorder prediction 193 223 - -
Bhi11g02352 298 SMART B3_2 44 157 IPR003340 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g02352 Bhi-Chr11:63753416 Bhi12g00059 Bhi-Chr12:1680180 1.29E-48 dispersed
Bhi11g02351 Bhi-Chr11:63751937 Bhi11g02352 Bhi-Chr11:63753416 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2494 PF02362 B3 3.20E-30 CL0405 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g02352 - - bhj:120091802 506.908