Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g02367 CTTCTCCGCCCACCCCTTTGACTTTTCTTTTCCCTTTTCCCTTCAGATTCCTCCATTTGTACTCCTTTTGACCCGTTTTTCCTTCTTTTCTCATATAACCCATCAATCCCTCTTCTGGGTTCTTCAATTCCCCTGTTTCTCAACCAACCCATTTCTCCATTTCTCCATTTCTCCATTTTCCATTTCCTCTTCTGGGTTTTCACCAATGAACGATTTATTCTCCTCTCGATCCTTTTCCCGCGACACCCATGTCGTTGAAATGGGCAACGCCTCCTTTTCCCCTACTGCTGTTAATCTCGACAAGTTCTTTGAGGATGTTGAGTCCGTTAAAGACGAGCTCAAGGAGCTTGAGCGACTCTACTCCAACCTCCATGACTCTCATGAACAGAGCAAGACGCTTCACAATGCTAAGGCCGTCAAGGACCTCCGATCTCGCATGGATTCTGATGTTTCCCTTGCTCTCAAGAAGGCCAAGCTTATTAAGGTCCGATTGGAAGCTCTTGATCGCTCCAATGCTGCCAATCGGAGCCTCCCTGGTTGCGGTCCCGGTTCTTCTTCTGACCGGACTCGGACTTCTGTAGTCAACGGTTTAAGGAAGAAATTGCAGGATTCTATGGAGAGTTTCAACAATCTCAGGCAACAGATCTCCTCTGAGTACAGGGAGACCGTTCAGCGAAGATATTACACTGTTACTGGTGAAAATCCGGACGAGAAAACCATTGATGTCTTGATATCTACAGGTGAAAGTGAGACATTCTTGCAGAAAGCCATTCAAGAACAAGGTAGAGGCAGAATCCTAGATACCATTAGTGAGATCCAGGAGAGGCATGATGCTGTAAAAGACCTGGAAAGGAACCTCAAAGAGCTGCACCAGGTTTTCTTGGACATGGCAGTCTTGGTACACGAGCAAGGCGAGAAACTTGACGATATCGAAAGCCAAGTGAACAGGGCTCATTCTTTTGTTCGAGGCGGCACGCAGGAGTTGACAACAGCCAGAGTATACCAGAAAAACACCCGGAAATGGACAATTATTGCCATCATCATTTTGCTGCTCATTGTCCTGGTAATTGTCCTCAGCCTGCAGCCTTGGAAGAAAAATAACAGTGGTTCACCCACAGCACCCTAAAACGCCTGGTTTAAGGCCTCTTTCCTATGAAGTTCGATGAGTCGTCTCCTACCGAAAAACTCTCGATCGAGTCCTCACACTATACAGCTGTATGTTACTGCCCATATTATTTGAGACATCAGGATCTTATTATCTATTTTTACCTCATCTTGTTTCCATTTTTTCATTAGTATCATTATTTCTTTAATTCTATAACAGTTTAGACATGAAGAGGTTAGATGGAGAATGGCTTAATTGATGAAAAACCTTGAGGTCTTGATGTCATTGAGGCAGGGTTGGTTCCTGTTGGGTTAGACATTGTTGTATACATCCTTTGGATTTTAGATTCTTTTGTGTAATAGATTTGATACTTTTTGGAGTGATTTAGTTTATATATTATGTTCTTTCTGTATCCCACTCA 1526 43.64 MNDLFSSRSFSRDTHVVEMGNASFSPTAVNLDKFFEDVESVKDELKELERLYSNLHDSHEQSKTLHNAKAVKDLRSRMDSDVSLALKKAKLIKVRLEALDRSNAANRSLPGCGPGSSSDRTRTSVVNGLRKKLQDSMESFNNLRQQISSEYRETVQRRYYTVTGENPDEKTIDVLISTGESETFLQKAIQEQGRGRILDTISEIQERHDAVKDLERNLKELHQVFLDMAVLVHEQGEKLDDIESQVNRAHSFVRGGTQELTTARVYQKNTRKWTIIAIIILLLIVLVIVLSLQPWKKNNSGSPTAP 306
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 64444391 64446619 - XM_039049929.1 Bhi11g02367 51079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g02367 306 MobiDBLite consensus disorder prediction 109 123 - -
Bhi11g02367 306 PANTHER SYNTAXIN 9 294 IPR045242 -
Bhi11g02367 306 SUPERFAMILY t-snare proteins 30 256 IPR010989 GO:0016020|GO:0016192
Bhi11g02367 306 Pfam SNARE domain 237 289 IPR000727 -
Bhi11g02367 306 MobiDBLite consensus disorder prediction 104 123 - -
Bhi11g02367 306 Pfam Syntaxin 33 236 IPR006011 GO:0016020
Bhi11g02367 306 PANTHER SYNTAXIN OF PLANTS 122 PROTEIN 9 294 - -
Bhi11g02367 306 ProSitePatterns Syntaxin / epimorphin family signature. 207 246 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bhi11g02367 306 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 201 263 IPR000727 -
Bhi11g02367 306 Coils Coil 31 58 - -
Bhi11g02367 306 SMART tSNARE_6 196 263 IPR000727 -
Bhi11g02367 306 Coils Coil 204 224 - -
Bhi11g02367 306 Coils Coil 126 150 - -
Bhi11g02367 306 SMART SynN_4 26 152 IPR006011 GO:0016020
Bhi11g02367 306 CDD SNARE_syntaxin1-like 200 262 - -
Bhi11g02367 306 CDD SynN 31 188 IPR006011 GO:0016020
Bhi11g02367 306 Gene3D - 197 293 - -
Bhi11g02367 306 Gene3D - 29 161 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01775 Bhi-Chr3:37339051 Bhi11g02367 Bhi-Chr11:64444391 9.88E-148 dispersed
Bhi11g01551 Bhi-Chr11:44646765 Bhi11g02367 Bhi-Chr11:64444391 5.64E-85 dispersed
Bhi11g02367 Bhi-Chr11:64444391 Bhi10g01452 Bhi-Chr10:34753599 9.31E-71 dispersed
Bhi08g01910 Bhi-Chr8:54935454 Bhi11g02367 Bhi-Chr11:64444391 1.29E-123 transposed
Bhi11g02367 Bhi-Chr11:64444391 Bhi03g01774 Bhi-Chr3:37337842 1.70E-154 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g02367 K08486 - csv:101208931 560.451