Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g02374 TTCCATTAACATTTCCCCAAATTCACACAACAAACGAACGAACAATCAATCTACAGAAGCTCCAACAATGGAAGATGAAATCGAAGTCCCCCACTACTTCCTCTGCCCCATCTCCCTCCAAATCATGAAAGACCCTGTAATTCTCCCCTCCGGCATCACCTACGACCGCCACTCCATTGAAACCTGGCTCTTCTCCAACAAAAACTCCTTCTGTCCCGTCACCAAACTCCCCATCTCCGATTCCGATTCCGATTTCCTCACCCCCAACCACACCCTCCGCCGTCTAATCCAAGCTTGGTGCACTTTAAACTCCTCCCATGGCGTCGAACGCTTCCCCACTCCCAAACCCCCCATTCATAAATCCCAAATCCTCCACCTCATTTCCTCTGCCAACACTTCCCCTTCTTCCTTAATCTCCTCCATTCATCGTCTCCGCTCTATCTCCGATGAATCTGAAACCAATCGCCGCTGTGTTGAATCCGCCGGAGCGCCAGAGTTTTTAGCCTCTGTTATTGTTGACACCGACTCCTCTGCTTCTTATGAAGCTCTCTCCACTCTCCATAACCTCCGTCTCTCCGATTCAACGTTCAAACGCTTGGCTACCCATTCCGAGTTTCTTGATTCTTTGACGAATTTCATGAAATTACGGGGTACCCAAGAATCGTCGAGAGCGTATGCCGTCTTGATTTTGAAATCTATTGTAGAAGTCGCTGACCCAATTCAACTAAGCTTCTTGAAATCCGATTTGTTTGTGCAAATTGTTGAGATTTTGAAGGATCGGTCATCGTCTCAGCAGATTTTCAAGGCAGCATTGGGGATTTTGATTGCGGTATGTCCATGGGGAAGGAACAGGGTGAAGGCGGTGGAAGCAGGTGGGGTTGGGGTTTTGGTTGAGATTTTACTAGCGACGCCGGAAAGGAGAGTGTGTGAGATGACATTGATGGCGATGGATTTGCTCTGTGGGTGTGCGGAAGGAAGGGCGGCGCTGCTGGGACACGGCGGAGGGATGGCGGTGGTTTCGAAGAAGATATTGAGAGTATCGCAAGTGGGGAGTGAAAGGGCGGTGAGGATTCTGTATTGGGTGGCGAAATTCTCGGGGAGTCCGGCGGTTTTAATGGAAATGGCGCAATTGGGGATTGTGGCGAAGCTTTGTTTGGTTCTGCAAATCGAAAATGGAAGCAAGACGAAGGAGAAAGCTAAAGAGATTTTGAAAATGCATGCTCGTGTTTGGAAGAATTCGCCTTGTATTCCTTCTAAATTGGCTTCTTCATATCCTACAAATTAAGGAATTTCATCAAACAAAACCCCATCCATTTTAACTCATTTCTCTTTTTCTTCTCATTTTTGTGTATATATATTATTCACTACAATTGTAAACTGTGAATTTAGAACAATTATTCAAATGAAAATCAATACACATTGTCTCTTTGCAAAAGTTTGT 1441 45.94 MEDEIEVPHYFLCPISLQIMKDPVILPSGITYDRHSIETWLFSNKNSFCPVTKLPISDSDSDFLTPNHTLRRLIQAWCTLNSSHGVERFPTPKPPIHKSQILHLISSANTSPSSLISSIHRLRSISDESETNRRCVESAGAPEFLASVIVDTDSSASYEALSTLHNLRLSDSTFKRLATHSEFLDSLTNFMKLRGTQESSRAYAVLILKSIVEVADPIQLSFLKSDLFVQIVEILKDRSSSQQIFKAALGILIAVCPWGRNRVKAVEAGGVGVLVEILLATPERRVCEMTLMAMDLLCGCAEGRAALLGHGGGMAVVSKKILRVSQVGSERAVRILYWVAKFSGSPAVLMEMAQLGIVAKLCLVLQIENGSKTKEKAKEILKMHARVWKNSPCIPSKLASSYPTN 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 64661842 64663282 - XM_039047362.1 Bhi11g02374 51086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g02374 405 Gene3D - 97 389 IPR011989 -
Bhi11g02374 405 SUPERFAMILY ARM repeat 101 371 IPR016024 -
Bhi11g02374 405 Pfam U-box domain 7 81 IPR003613 GO:0004842|GO:0016567
Bhi11g02374 405 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PUB23 3 403 - -
Bhi11g02374 405 SUPERFAMILY RING/U-box 4 85 - -
Bhi11g02374 405 ProSiteProfiles U-box domain profile. 6 84 IPR003613 GO:0004842|GO:0016567
Bhi11g02374 405 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 88 IPR013083 -
Bhi11g02374 405 PANTHER WDSAM1 PROTEIN 3 403 IPR045185 GO:0061630
Bhi11g02374 405 SMART Ubox_2 10 77 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02276 Bhi-Chr3:50123179 Bhi11g02374 Bhi-Chr11:64661842 8.19E-149 dispersed
Bhi07g00411 Bhi-Chr7:18495586 Bhi11g02374 Bhi-Chr11:64661842 1.94E-56 dispersed
Bhi10g00192 Bhi-Chr10:4173822 Bhi11g02374 Bhi-Chr11:64661842 9.12E-142 dispersed
Bhi11g02374 Bhi-Chr11:64661842 Bhi01g00112 Bhi-Chr1:2316857 4.52E-69 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g02374 - - csv:101208445 672.159