Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g02375 GCAGAAGAAGATTTTGAAATTGATCCATGAACCACACGTGCTTTCTCAGATTTCCCATTATACTTTGAGTGAAGTAAATTCCCAACAAAAAGGATAACATATTTTTCTTCGAAACTCACTTCCCCGGTCGGCGATCGATGGCGACTTACCTTCATGGCAATTCTGATCAATTCCAATCTTCTGATGGCGGCCTTCAAACCCTTGTCTTAATGAATCCAAGCTATGTTCAATTCTCCGATACGCCTCCACCTCCGTCACACCCTAATCTCGTCTTCTTCAATTCTTCTTCTACTGCTGCTAATACTTTCTCTACACTGGCACAAGCCCCTCCCTCGTCTCATACTCAACAATTCGTTGGAATTCCGTTACAGACCACGGCTGCTTCCCCGACATCCCAAGACCACAATTCGCACCCTTTGAATCCCCACCATGATATCTCTGCCTTGCACGGCTTTGTTCCGCGTGTTCAGCATAACGTTTGGAGCACAATCGATCCTTCCACGGCGGCGCGTGATTCTGCACGCGCTCAGCAGGGGTTGTCTTTGAGCCTTTCTTCGCAACATCCGCAGGGTTTTGGGTCGAGAGATATTCAATCGCAGACCCAACAGGCCGCTTCTGGCGAGGAGAACATGCGAGTCTCTGGCGGATCGAGTTCTTCGGCTTCCGCTGTCACTAACGGCGTGGCTGGAATTCAGAGTGTTTTAATTAGCTCCAAATATCTTAAGGCTGCGCAAGAACTTCTAGACGAGGTTGTGAATGTCACCCAAAAAGGAATTAAAAGTGAATCATCCCCAAAGAAGGCCACCGGAAATCAATCGAAGGTGATGGGAGATGCATCCGCTGTCACAGGAACTGCAGACGGCTCGTTAGAAGGAGAAGCCGACGGTAAACGTGCTGCCGAGATAACAACCGCCGAGAGACAAGAAATTCAGATGAAGAAAGCAAAGCTTATAAGCATGCTTGACGAGGTGGAGCAGAGGTACAGACAGTACCACCACCAGATGCAGATAGTAATATCCTCATTCGAGCAGGCAGCCGGAGCCGGTTCCGCAAAAACCTACACCGCCCTCGCACTTCAGACGATTTCGAAGCAATTCCGCTGCTTAAAAGATGCAATTACCGGCCAAATCCGAGCGGCGAACAAGAGTTTGGGTGAAGAAGAATGTATGGGAAGAAAAATGGAAGGTTCCCGGTTGAAATTCGTCGATCACCATCTCCGGCAACAACGAGCTCTGCAACAATTGGGCATGATCCAACACAATGCTTGGAGACCCCAGAGAGGCTTACCGGAGAGATCCGTTTCGATTCTTCGTGCTTGGCTTTTCGAACACTTCCTCCATCCTTACCCTAAGGATTCAGATAAACACATGCTCGCTAAGCAAACCGGGCTCACCAGAAGCCAGGTTTCGAATTGGTTCATAAACGCGAGAGTTCGACTGTGGAAGCCAATGGTGGAAGAGATGTACATGGAGGAAATCAAAGAGCAAGAACAGAACGGCGGCAAATCGACACCCACGACGGAAAAAAGCAACGACGATTCGGTCGCGAAATCCATAGCTCCACCACCGGAAACAAAAAGCCCCAATTTAAAACAAGAGAACTCTCCAAACCATAACGTCCATCCTTCAATCTCAATCTCAAATTCCTCCGGCGGAAATGTTCGAAACCCATCTGGATTTACACTCATCGGAACCTCATCGGAACTCGACGGAATCACACAAGGAAGCCCCAAAAAACAAAGAGGCCCAGAAATCCTTCATTCCTCAAACAACAACAACAACGTCCCTTTCATAAACATGGACATCAAACCTCGAGAAGAAGAAGAACGTCAAAATCACAATCACAATCCCCATCACAATCATCATCTTGCAATGAAATTCGACGAAGAGAGACAAAACAGAGATGGGTATTCATTTCTAGGCCAACCCCATTTCAACATCGGCGGATTCGGCCAATACCCAATCGGTGAAATCGCCAGATTCGACGCCGATCAGTTCACTCCAAGATTCTCCGGCAACAATGGCGTCTCTTTGACTTTAGGCCTTCCCCATTGCGAAAACCTCCCCTTAAACGCAGCTACCCATCAAAGCTTCCTCCCAAACCAGAGCATCCATTTAGGAAGAAGAACAGAAATTGGAAAACCCACTGATTTTTCCGCCATTAACGCCTCTACAGCTCACTCTTCCACTGCTTTTGAGACCATCAATATCCAAAATGGAAAAAGGTTCGCTGCTCAATTACTGCCAGACTTTGTGGCCTAAACCAAAATTTCAAAACACAGAGTAAAATTCAATCCGCCATTGTCAGATTCTGAGCAAACACAGATTGGAGGAAGAGATTGTTGTAAGGTACTACTGTAAAAAAAGAACACAACAAAAAGACAAAAAAAGAAAATTAAATAAGCAAATTTTAATAGTATAGTTTTAAATTTTTTTTTTTTTTTTTCCATTTACACTTTGCATAGAATTATAAATCTCAGTCAGTGGGTTAATTAGGATTTAGGGTATATGAGTATATATATTTTTGGGGATTGTATATTGTTTTTGTAAGGGTTTCTTTTTTTAAAAACAAAAAATGGGTTAGATGGATTGTTATGATTAGATCAGTTTCGCTGGTGTAATGTGTTATTATACCCATTATGAATATTGATTTCAAATATATGTATATGGATTAAATATGTGCTAA 2685 44.32 MATYLHGNSDQFQSSDGGLQTLVLMNPSYVQFSDTPPPPSHPNLVFFNSSSTAANTFSTLAQAPPSSHTQQFVGIPLQTTAASPTSQDHNSHPLNPHHDISALHGFVPRVQHNVWSTIDPSTAARDSARAQQGLSLSLSSQHPQGFGSRDIQSQTQQAASGEENMRVSGGSSSSASAVTNGVAGIQSVLISSKYLKAAQELLDEVVNVTQKGIKSESSPKKATGNQSKVMGDASAVTGTADGSLEGEADGKRAAEITTAERQEIQMKKAKLISMLDEVEQRYRQYHHQMQIVISSFEQAAGAGSAKTYTALALQTISKQFRCLKDAITGQIRAANKSLGEEECMGRKMEGSRLKFVDHHLRQQRALQQLGMIQHNAWRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEIKEQEQNGGKSTPTTEKSNDDSVAKSIAPPPETKSPNLKQENSPNHNVHPSISISNSSGGNVRNPSGFTLIGTSSELDGITQGSPKKQRGPEILHSSNNNNNVPFINMDIKPREEEERQNHNHNPHHNHHLAMKFDEERQNRDGYSFLGQPHFNIGGFGQYPIGEIARFDADQFTPRFSGNNGVSLTLGLPHCENLPLNAATHQSFLPNQSIHLGRRTEIGKPTDFSAINASTAHSSTAFETINIQNGKRFAAQLLPDFVA 707
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 64704119 64708044 - XM_039048039.1 Bhi11g02375 51087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g02375 707 CDD homeodomain 377 438 IPR001356 GO:0003677
Bhi11g02375 707 Pfam Homeobox KN domain 394 433 IPR008422 GO:0003677|GO:0006355
Bhi11g02375 707 ProSiteProfiles 'Homeobox' domain profile. 374 437 IPR001356 GO:0003677
Bhi11g02375 707 MobiDBLite consensus disorder prediction 479 528 - -
Bhi11g02375 707 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 10 658 - -
Bhi11g02375 707 SUPERFAMILY Homeodomain-like 378 444 IPR009057 -
Bhi11g02375 707 Pfam Associated with HOX 188 328 IPR006563 -
Bhi11g02375 707 SMART prehox3 183 329 IPR006563 -
Bhi11g02375 707 MobiDBLite consensus disorder prediction 537 551 - -
Bhi11g02375 707 MobiDBLite consensus disorder prediction 212 231 - -
Bhi11g02375 707 Coils Coil 261 281 - -
Bhi11g02375 707 MobiDBLite consensus disorder prediction 126 177 - -
Bhi11g02375 707 MobiDBLite consensus disorder prediction 453 468 - -
Bhi11g02375 707 MobiDBLite consensus disorder prediction 448 551 - -
Bhi11g02375 707 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 10 658 - -
Bhi11g02375 707 MobiDBLite consensus disorder prediction 80 100 - -
Bhi11g02375 707 Gene3D - 380 458 - -
Bhi11g02375 707 SMART HOX_1 377 441 IPR001356 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00505 Bhi-Chr4:12570126 Bhi11g02375 Bhi-Chr11:64704119 1.56E-47 dispersed
Bhi04g00506 Bhi-Chr4:12570126 Bhi11g02375 Bhi-Chr11:64704119 1.56E-47 dispersed
Bhi10g00190 Bhi-Chr10:4078749 Bhi11g02375 Bhi-Chr11:64704119 1.86E-180 dispersed
Bhi10g00191 Bhi-Chr10:4078867 Bhi11g02375 Bhi-Chr11:64704119 1.86E-180 dispersed
Bhi10g01965 Bhi-Chr10:48974683 Bhi11g02375 Bhi-Chr11:64704119 2.42E-106 dispersed
Bhi10g01966 Bhi-Chr10:48974685 Bhi11g02375 Bhi-Chr11:64704119 2.42E-106 dispersed
Bhi11g02375 Bhi-Chr11:64704119 Bhi12g00294 Bhi-Chr12:8560978 4.41E-82 dispersed
Bhi11g02375 Bhi-Chr11:64704119 Bhi11g02376 Bhi-Chr11:64704119 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2499 PF07526 POX 1.30E-49 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g02375 - - csv:101208201 1223.38