Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi11g02525 | TGCCTGAAAAAATCCAGAAAGATACGTAAAAAAATTGCCAAAAAAAGTGAACTCTTTTAATCTCTCTGTAGTCTGTACCATCATCACTGAACAACAAGAGCAAGAAGAAGAAGAAAGAAGAAGAAGAAATTAAGTTAGTGCCGCCAATCCCACGGTGCCACATACATCTTCTTTTTCACATCTCAGCCGCTCGATCCGATAATCCCCAATTTTCAATTCATCTTATCCATCGATCGCCTCATCATCATCGTTGATCGATGGCGAATCAACTTCAACGCAGCTGGGTCTAAGGAAGAATACAATTTGGGGTTTATTTGAATGATATGGAATCGAGAGCTGTCGTCTGAGTCAGAGCCGCTTTCGAATTCCGTTCCAAATGAAGATGTGAATTTAGCTGATTTGACAGAGGATCCTGTTCATAGATTTGGGGAAGCTATCAGGTTTAGGACGAGACAGCGGTGGAGAAGGCGTCAAGTTCAAATTCCTTCTGAGACTCGGAATATTACAATGGAATTAAGTGAAATCATGGTCAATTCAGGCAATGGGAATTCATTACAGCCATTGCAAGCTGGTGAGGGTAGTATTACTGCTGAGGAAAGGAAAAATGAAACTGGGAAAACGTGTGAAATTAACAATGAAGCGTTGGAAGATGAAAAAACAGAGAATAAGAGTGATGTTGAAAAGAGCAGTGACTCTGATGGTAGTTTCTTTGATTGCAATATATGTCTGGATTTGGCTAGGGACCCCGTTGTAACTTGTTGTGGTCATCTATACTGCTGGCCGTGCCTTTATCGATGGTTACATCTACATTCAGAAGCCAAGGAATGTCCTGTATGTAAAGGAGAGGTTACTACAAAGAATGTGACTCCAATTTATGGGCGTGGCAGCAGTACCCCTGTGACCGAGGAGGATGCTACACTTAAGATTCCTCTAAGGCCCCATGCTCGAAAGGTTGAAAGTTTGAGGCAAACCATCCAGAGGACTGCATTTAGTTTCCCAGTGGAGGATATGATTCGACGATTGGGAAACAGATTCGATTTCAATCGTGATCTAGACCAACCGCCAGAGCCAGACAGTTCACATGAAACATTTGGTAGATCTCCAACCTTGTTGAATAGGATTTTAACATCCAGGGGCATTCGTAGAGAACAAATTTCATTGCCCCATCATGATGATGTAGGAGATTTAGCACACACTGATGTGGCTAGCATTGAGGCAGGGGAAACCCGTCTTCAGTCTCTCCCAGTGCTTCGATCATTATTACACCGGACAAGAGTTTCTTCTCTTACTTCTGCATTTAATTCCGCTGATAGGCTTCCAGATGGTTTTTTGTATACTGATCCACTCATTCCTAGAAGTCAAGAGCAGCCTCCTCCACCTGTCGAGGATAGAGATTCTTTCTCTAGCATTGCTGCTGTTATCAATTCAGAGAGTCAAATGGACACTGCTGTAGAAATTGATTCCATGGTCTCTATTTCAACATCATCCTCCAGAAGGAGAAGTGATGCTTTACAAGTTTCTGATGTAGACAGTGGAAACTCTCGGGCACCCAGACGGAGAAGATTGGCTTGAAAAGACCTCTATCTGGGTCCTAAGATTGATAAATGAATCAGGACTGCAATATTTCAACACCTATGTAAGTGCTACTTGGATCTTCTATTTACTTTTTCACTCAGCAAAAAGTAATGACTCTTGCTTCCACAATGGACTATCACATGGTCCATATTCAACGTTCTTCATTTTACTCCTTACTGTACGTGAATTGAAATGTAGGCATACTTCTTGAACATATTGAGAAGCAAATAAGTAAATCAAGTAGAGTACTGTCCTTCATCTCCCCCATTTGTAACCTTTTATGCATCAAAACCTGAGTTCAACATTTTCTTAAAAATCCATATCTATTATCTTCTTGACTTGTGTTTTCA | 1925 | 41.19 | MIWNRELSSESEPLSNSVPNEDVNLADLTEDPVHRFGEAIRFRTRQRWRRRQVQIPSETRNITMELSEIMVNSGNGNSLQPLQAGEGSITAEERKNETGKTCEINNEALEDEKTENKSDVEKSSDSDGSFFDCNICLDLARDPVVTCCGHLYCWPCLYRWLHLHSEAKECPVCKGEVTTKNVTPIYGRGSSTPVTEEDATLKIPLRPHARKVESLRQTIQRTAFSFPVEDMIRRLGNRFDFNRDLDQPPEPDSSHETFGRSPTLLNRILTSRGIRREQISLPHHDDVGDLAHTDVASIEAGETRLQSLPVLRSLLHRTRVSSLTSAFNSADRLPDGFLYTDPLIPRSQEQPPPPVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSSRRRSDALQVSDVDSGNSRAPRRRRLA | 417 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 68270915 | 68273534 | - | XM_039048933.1 | Bhi11g02525 | 51237 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi11g02525 | 417 | MobiDBLite | consensus disorder prediction | 386 | 417 | - | - | |
Bhi11g02525 | 417 | ProSiteProfiles | Zinc finger RING-type profile. | 133 | 174 | IPR001841 | - | |
Bhi11g02525 | 417 | SMART | ring_2 | 133 | 173 | IPR001841 | - | |
Bhi11g02525 | 417 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED | 9 | 408 | IPR045103 | GO:0005783|GO:0006511|GO:0061630 | |
Bhi11g02525 | 417 | MobiDBLite | consensus disorder prediction | 242 | 261 | - | - | |
Bhi11g02525 | 417 | CDD | RING-HC_AtRMA_like | 131 | 175 | - | - | |
Bhi11g02525 | 417 | ProSitePatterns | Zinc finger RING-type signature. | 148 | 157 | IPR017907 | - | |
Bhi11g02525 | 417 | PANTHER | OS01G0830200 PROTEIN | 9 | 408 | - | - | |
Bhi11g02525 | 417 | Pfam | Zinc finger, C3HC4 type (RING finger) | 133 | 178 | - | - | |
Bhi11g02525 | 417 | MobiDBLite | consensus disorder prediction | 340 | 359 | - | - | |
Bhi11g02525 | 417 | SUPERFAMILY | RING/U-box | 129 | 186 | - | - | |
Bhi11g02525 | 417 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 83 | 188 | IPR013083 | - | |
Bhi11g02525 | 417 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Bhi11g02525 | 417 | MobiDBLite | consensus disorder prediction | 386 | 406 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi01g01995 | Bhi-Chr1:45200101 | Bhi11g02525 | Bhi-Chr11:68270915 | 2.24E-07 | dispersed | |
Bhi01g01996 | Bhi-Chr1:45200104 | Bhi11g02525 | Bhi-Chr11:68270915 | 2.38E-07 | dispersed | |
Bhi11g01428 | Bhi-Chr11:41410293 | Bhi11g02525 | Bhi-Chr11:68270915 | 2.48E-41 | dispersed | |
Bhi11g02525 | Bhi-Chr11:68270915 | Bhi08g01564 | Bhi-Chr8:44902196 | 6.50E-27 | dispersed | |
Bhi11g02525 | Bhi-Chr11:68270915 | Bhi11g02526 | Bhi-Chr11:68270915 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi11g02525 | K10666 | - | csv:101220497 | 755.747 |