Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g02525 TGCCTGAAAAAATCCAGAAAGATACGTAAAAAAATTGCCAAAAAAAGTGAACTCTTTTAATCTCTCTGTAGTCTGTACCATCATCACTGAACAACAAGAGCAAGAAGAAGAAGAAAGAAGAAGAAGAAATTAAGTTAGTGCCGCCAATCCCACGGTGCCACATACATCTTCTTTTTCACATCTCAGCCGCTCGATCCGATAATCCCCAATTTTCAATTCATCTTATCCATCGATCGCCTCATCATCATCGTTGATCGATGGCGAATCAACTTCAACGCAGCTGGGTCTAAGGAAGAATACAATTTGGGGTTTATTTGAATGATATGGAATCGAGAGCTGTCGTCTGAGTCAGAGCCGCTTTCGAATTCCGTTCCAAATGAAGATGTGAATTTAGCTGATTTGACAGAGGATCCTGTTCATAGATTTGGGGAAGCTATCAGGTTTAGGACGAGACAGCGGTGGAGAAGGCGTCAAGTTCAAATTCCTTCTGAGACTCGGAATATTACAATGGAATTAAGTGAAATCATGGTCAATTCAGGCAATGGGAATTCATTACAGCCATTGCAAGCTGGTGAGGGTAGTATTACTGCTGAGGAAAGGAAAAATGAAACTGGGAAAACGTGTGAAATTAACAATGAAGCGTTGGAAGATGAAAAAACAGAGAATAAGAGTGATGTTGAAAAGAGCAGTGACTCTGATGGTAGTTTCTTTGATTGCAATATATGTCTGGATTTGGCTAGGGACCCCGTTGTAACTTGTTGTGGTCATCTATACTGCTGGCCGTGCCTTTATCGATGGTTACATCTACATTCAGAAGCCAAGGAATGTCCTGTATGTAAAGGAGAGGTTACTACAAAGAATGTGACTCCAATTTATGGGCGTGGCAGCAGTACCCCTGTGACCGAGGAGGATGCTACACTTAAGATTCCTCTAAGGCCCCATGCTCGAAAGGTTGAAAGTTTGAGGCAAACCATCCAGAGGACTGCATTTAGTTTCCCAGTGGAGGATATGATTCGACGATTGGGAAACAGATTCGATTTCAATCGTGATCTAGACCAACCGCCAGAGCCAGACAGTTCACATGAAACATTTGGTAGATCTCCAACCTTGTTGAATAGGATTTTAACATCCAGGGGCATTCGTAGAGAACAAATTTCATTGCCCCATCATGATGATGTAGGAGATTTAGCACACACTGATGTGGCTAGCATTGAGGCAGGGGAAACCCGTCTTCAGTCTCTCCCAGTGCTTCGATCATTATTACACCGGACAAGAGTTTCTTCTCTTACTTCTGCATTTAATTCCGCTGATAGGCTTCCAGATGGTTTTTTGTATACTGATCCACTCATTCCTAGAAGTCAAGAGCAGCCTCCTCCACCTGTCGAGGATAGAGATTCTTTCTCTAGCATTGCTGCTGTTATCAATTCAGAGAGTCAAATGGACACTGCTGTAGAAATTGATTCCATGGTCTCTATTTCAACATCATCCTCCAGAAGGAGAAGTGATGCTTTACAAGTTTCTGATGTAGACAGTGGAAACTCTCGGGCACCCAGACGGAGAAGATTGGCTTGAAAAGACCTCTATCTGGGTCCTAAGATTGATAAATGAATCAGGACTGCAATATTTCAACACCTATGTAAGTGCTACTTGGATCTTCTATTTACTTTTTCACTCAGCAAAAAGTAATGACTCTTGCTTCCACAATGGACTATCACATGGTCCATATTCAACGTTCTTCATTTTACTCCTTACTGTACGTGAATTGAAATGTAGGCATACTTCTTGAACATATTGAGAAGCAAATAAGTAAATCAAGTAGAGTACTGTCCTTCATCTCCCCCATTTGTAACCTTTTATGCATCAAAACCTGAGTTCAACATTTTCTTAAAAATCCATATCTATTATCTTCTTGACTTGTGTTTTCA 1925 41.19 MIWNRELSSESEPLSNSVPNEDVNLADLTEDPVHRFGEAIRFRTRQRWRRRQVQIPSETRNITMELSEIMVNSGNGNSLQPLQAGEGSITAEERKNETGKTCEINNEALEDEKTENKSDVEKSSDSDGSFFDCNICLDLARDPVVTCCGHLYCWPCLYRWLHLHSEAKECPVCKGEVTTKNVTPIYGRGSSTPVTEEDATLKIPLRPHARKVESLRQTIQRTAFSFPVEDMIRRLGNRFDFNRDLDQPPEPDSSHETFGRSPTLLNRILTSRGIRREQISLPHHDDVGDLAHTDVASIEAGETRLQSLPVLRSLLHRTRVSSLTSAFNSADRLPDGFLYTDPLIPRSQEQPPPPVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSSRRRSDALQVSDVDSGNSRAPRRRRLA 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 68270915 68273534 - XM_039048933.1 Bhi11g02525 51237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g02525 417 MobiDBLite consensus disorder prediction 386 417 - -
Bhi11g02525 417 ProSiteProfiles Zinc finger RING-type profile. 133 174 IPR001841 -
Bhi11g02525 417 SMART ring_2 133 173 IPR001841 -
Bhi11g02525 417 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 9 408 IPR045103 GO:0005783|GO:0006511|GO:0061630
Bhi11g02525 417 MobiDBLite consensus disorder prediction 242 261 - -
Bhi11g02525 417 CDD RING-HC_AtRMA_like 131 175 - -
Bhi11g02525 417 ProSitePatterns Zinc finger RING-type signature. 148 157 IPR017907 -
Bhi11g02525 417 PANTHER OS01G0830200 PROTEIN 9 408 - -
Bhi11g02525 417 Pfam Zinc finger, C3HC4 type (RING finger) 133 178 - -
Bhi11g02525 417 MobiDBLite consensus disorder prediction 340 359 - -
Bhi11g02525 417 SUPERFAMILY RING/U-box 129 186 - -
Bhi11g02525 417 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 188 IPR013083 -
Bhi11g02525 417 MobiDBLite consensus disorder prediction 1 22 - -
Bhi11g02525 417 MobiDBLite consensus disorder prediction 386 406 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01995 Bhi-Chr1:45200101 Bhi11g02525 Bhi-Chr11:68270915 2.24E-07 dispersed
Bhi01g01996 Bhi-Chr1:45200104 Bhi11g02525 Bhi-Chr11:68270915 2.38E-07 dispersed
Bhi11g01428 Bhi-Chr11:41410293 Bhi11g02525 Bhi-Chr11:68270915 2.48E-41 dispersed
Bhi11g02525 Bhi-Chr11:68270915 Bhi08g01564 Bhi-Chr8:44902196 6.50E-27 dispersed
Bhi11g02525 Bhi-Chr11:68270915 Bhi11g02526 Bhi-Chr11:68270915 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g02525 K10666 - csv:101220497 755.747