Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g02653 CAACGGCCTAACCGTTACAGCCGACGTGGACGCCAACTCATCAAATTCCCTCAATTGCAAAAACTTCGTCGTCTTCATCGCCGCAGTATTGTACGTTTTTTTGCAGGCGATTTTTTCACTCTCTACTCTTGTTCGGACAAATTCCTTTTCTCTCTGCAAGAACCAGTCGGGAACGCCTTTGTTTCGCTCTCTCTTTCTCGAAGAGAGATATCAAACTACACAGTGATTGTTTTTGGAGAAATGCTCCAACAGTGTCTGCTTACGCATTTTAGTGTTGTCATCTATTCGACGATTCTGACTTCACTGGCTTGGGCGTTCACTAATCCGCCGGATGTTATAGCTCTTCAGGATCTGTATAGTGCTATGAACTATCCACTAGAGCTTAAAGGATGGAGAAAAGAAGGTGGAGATCCTTGTGAGGAATCATGGACTGGAGTGTCTTGCTCCGGTTCGTCTGTAATATACCTTAAACTCCATGGACTAAATCTCACTGGAAATCTCGGAGGGCAGCTCAACAACCTAATCGATTTGAAGCAACTGGATGTTAGCTCTAATAGACTTACGGGTGAAATTCCACACAACTTGCCTCCTAATGCGACTCATATAAATATGGCATTCAACCATTTAAGCCAAAATATTCCACATACTTTATCTTACATGGGAAATCTCCGACATCTAAATCTGAGCCATAATACTCTATCTGGTGTGATTGGAAATGTTTTCACTGGTTTACAGAATTTGAGAGAGATGGATTTATCATATAATGACTTCGCTGGAGATTTGCCAAGTTCATTTGGTTCCCTGACAAACATCACTAGACTGTTCTTGCAGAAAAACAAATTCACTGGATCAGTTGCCTACTTGTCTCGTCTTCCATTAATTGACTTGAACATCCAAGACAATTGTTTTAGTGGCATCATTCCGGAAAATTTTAGAAATATTCCAAATTTGTGGATTGGGGGCAATAGGTTTCGTCCAGAAGTCAATTCTCCACCTTGGGACTTTCCCCTGGAAAAAGCACCGATGGAGCAGAACATCAGTGGTCCTCCAACAACCAAGTCGAACGCCATCCAGAATTATCCCTCTCGGGGTGTAGTGAGGCATGAGAAGAAAAGGCTTGGTCCGGGTGGAATTGTTCTCCTGGTAGGCGGGTTAACATTAGTAGTTACCTTTGCAGCTCTCTTTTTCGTATTTGGCATGAAGAAAGTTCATGAAAAGAAAATAAATTTGAAGATTGGCAATATGTTACCCCGTTCTCTTCCTCTGGGCAAAGCTGAAGATGGTTTGTCTACTGCAACAGAAGAGAGCTCACAAAGCTTTCCCCTGAGTTCTCTACTCATGGGTGGTCCAAGGCCTATACCTTTATTAAATCACACGAGAACCGAGAAAGTTTCTGGAAAAAAAGGTTTTTCAAAGAGATGCAGGCTCCCAGTGAGAACAAAAATTTACACTCTGGCAGAGTTTCAATCCACTACAAACAACTTTAGTCAAGAGAATCTTCTGGGAGAGGGATCTCTTGGTGCTGTTTATAGAGCTGAATTTCCTGATGGCCAAGTTTTGGCTGTGAAAAATATCAACATGGCAGAGCTCTCATTTACAGAAGAAGAGCAATTTCTGGATGTGGTATGGACGGCTTCCCGTTTGAGGCACCCAAACATTGTTACACTGCTTGGATATTGTGTAGAGCATGGACAACATATGCTCGGATATGAATATGTTCGAAATCTGTCTCTTGATGACGCTTTACACTGTGAAGCATACATGTCTCTCTCATGGACTGTCCGTCTCCAGATTGCTCTTGGAGTTGCTAGGGCTTTAGATTATCTGCATACAAGTTTTTTCCCTCCATTTGCTCACTGCAATCTGAAGGCTGCCAACGTCTTACTGGATGAAGAACTGATACCTCGTATTTGTGATTGTGGGCTGTCTGTTTTGAGGCCACTTGTGACCAATAGAGTTAAAACGAAGGCTTCTGAGATTGTCAGTGGCGATAGAGGCTACCTTGCACCTGAACATGGTCAGCCAGGATTTGATAATACCAGAAGTGACGTGTATTCTTTTGGAGTGTTGCTTTTGGAGCTCGTCACAGGGAGAAAACCATTTGACAATTCGAAACCAAGGAAAGAGAAATCGCTGGTTAAATGGGCTTCATCTCGACTTCATGACAACGAGAGTTTAGAACAGATGGTTGATCCAGGCATCAAAGGAACATTTTCCTCCAAGGCTCTCTCACGCTTTGTCGATATTATCTCCCTTTGTGTGCAGCCTGTGAAGGAATTCCGACCACCAATGTCTGAAATAGTGGAACATCTAACAAATCTTCAAAGAAAGATGGAAATGGTGAAACGTGCTACAGCAGATGGAACTGAAGTGGATCATTTTGAGAAATCTTTTCGTTCTACCAACACTGGCTTCGTAAGTTCACCAGCATACAGCTATGCTTCCACCTCATTTTAGAAGGTTAGTCGATTTTTCATCGACTAATATTCTTCCTGTGTATAGACTCTCTAGTAAGAATCTTCTCTGTCGTCTCATGTACAGACAGTTTTGACTTCATGGTTAAAGAGTAAATCAATTTTGTATTCTTTGGAGAAATTGTATATTCACTCGAGCAA 2615 42.14 MLQQCLLTHFSVVIYSTILTSLAWAFTNPPDVIALQDLYSAMNYPLELKGWRKEGGDPCEESWTGVSCSGSSVIYLKLHGLNLTGNLGGQLNNLIDLKQLDVSSNRLTGEIPHNLPPNATHINMAFNHLSQNIPHTLSYMGNLRHLNLSHNTLSGVIGNVFTGLQNLREMDLSYNDFAGDLPSSFGSLTNITRLFLQKNKFTGSVAYLSRLPLIDLNIQDNCFSGIIPENFRNIPNLWIGGNRFRPEVNSPPWDFPLEKAPMEQNISGPPTTKSNAIQNYPSRGVVRHEKKRLGPGGIVLLVGGLTLVVTFAALFFVFGMKKVHEKKINLKIGNMLPRSLPLGKAEDGLSTATEESSQSFPLSSLLMGGPRPIPLLNHTRTEKVSGKKGFSKRCRLPVRTKIYTLAEFQSTTNNFSQENLLGEGSLGAVYRAEFPDGQVLAVKNINMAELSFTEEEQFLDVVWTASRLRHPNIVTLLGYCVEHGQHMLGYEYVRNLSLDDALHCEAYMSLSWTVRLQIALGVARALDYLHTSFFPPFAHCNLKAANVLLDEELIPRICDCGLSVLRPLVTNRVKTKASEIVSGDRGYLAPEHGQPGFDNTRSDVYSFGVLLLELVTGRKPFDNSKPRKEKSLVKWASSRLHDNESLEQMVDPGIKGTFSSKALSRFVDIISLCVQPVKEFRPPMSEIVEHLTNLQRKMEMVKRATADGTEVDHFEKSFRSTNTGFVSSPAYSYASTSF 738
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 71379639 71385273 + XM_039049801.1 Bhi11g02653 51365

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g02653 738 Gene3D Ribonuclease Inhibitor 28 257 IPR032675 -
Bhi11g02653 738 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 711 - -
Bhi11g02653 738 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Bhi11g02653 738 Gene3D Transferase(Phosphotransferase) domain 1 493 718 - -
Bhi11g02653 738 SUPERFAMILY L domain-like 27 238 - -
Bhi11g02653 738 SMART LRR_typ_2 188 211 IPR003591 -
Bhi11g02653 738 SMART LRR_typ_2 94 118 IPR003591 -
Bhi11g02653 738 SMART LRR_typ_2 140 163 IPR003591 -
Bhi11g02653 738 SMART LRR_typ_2 164 187 IPR003591 -
Bhi11g02653 738 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 2 ISOFORM X1 8 711 - -
Bhi11g02653 738 Pfam Protein tyrosine and serine/threonine kinase 418 691 IPR001245 GO:0004672|GO:0006468
Bhi11g02653 738 Gene3D Phosphorylase Kinase; domain 1 378 492 - -
Bhi11g02653 738 SUPERFAMILY Protein kinase-like (PK-like) 393 692 IPR011009 -
Bhi11g02653 738 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Bhi11g02653 738 ProSiteProfiles Protein kinase domain profile. 415 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g02653 - - - csv:101204194 1275.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g02653 Bhi-Chr11:71379639 Bhi11g02655 Bhi-Chr11:71386799 0 dispersed
Bhi11g02653 Bhi-Chr11:71379639 Bhi11g02654 Bhi-Chr11:71386798 0 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi05g01832 . 34 781 Strubbelig Receptor Gene Family AT4G03390 60.8 1.1e-201 701.0
Bhi03g00471 . 17 750 Strubbelig Receptor Gene Family AT4G03390 51.0 2.2e-159 560.5
Bhi03g00470 . 17 747 Strubbelig Receptor Gene Family AT4G03390 50.8 3.6e-157 553.1
Bhi03g00472 . 1 650 Strubbelig Receptor Gene Family AT4G03390 51.4 4.8e-138 489.6
Bhi09g00253 CCT 393 687 Strubbelig Receptor Gene Family AT4G03390 57.7 2.9e-90 330.9
Bhi09g00252 . 346 640 Strubbelig Receptor Gene Family AT4G03390 57.7 2.9e-90 330.9
Bhi09g00250 . 332 626 Strubbelig Receptor Gene Family AT4G03390 57.7 2.9e-90 330.9
Bhi09g00249 . 332 626 Strubbelig Receptor Gene Family AT4G03390 57.7 2.9e-90 330.9
Bhi09g00251 . 332 626 Strubbelig Receptor Gene Family AT4G03390 57.7 2.9e-90 330.9
Bhi11g02653 . 13 735 Strubbelig Receptor Gene Family AT5G06820 54.3 3.1e-187 652.9
Bhi04g01996 . 22 701 Strubbelig Receptor Gene Family AT1G78980 61.0 3.6e-193 672.5
Bhi01g02817 . 23 719 Strubbelig Receptor Gene Family AT1G78980 51.3 2.4e-152 537.0
Bhi01g02818 CCT 63 577 Strubbelig Receptor Gene Family AT1G78980 50.3 3.1e-128 456.8
Bhi09g00253 CCT 24 690 Strubbelig Receptor Gene Family AT1G78980 50.4 6.1e-124 442.6
Bhi09g00252 . 2 643 Strubbelig Receptor Gene Family AT1G78980 50.2 1.8e-115 414.5
Bhi09g00250 . 41 629 Strubbelig Receptor Gene Family AT1G78980 50.6 7.8e-111 399.1
Bhi09g00249 . 41 629 Strubbelig Receptor Gene Family AT1G78980 50.6 7.8e-111 399.1
Bhi09g00251 . 41 629 Strubbelig Receptor Gene Family AT1G78980 50.6 7.8e-111 399.1
Bhi03g00472 . 354 650 Strubbelig Receptor Gene Family AT1G78980 52.0 5.4e-80 296.6
Bhi04g01996 . 2 679 Strubbelig Receptor Gene Family AT3G13065 52.2 4.3e-146 516.2
Bhi09g00252 . 347 638 Strubbelig Receptor Gene Family AT3G13065 59.9 2.5e-98 357.5
Bhi09g00250 . 333 624 Strubbelig Receptor Gene Family AT3G13065 59.9 2.5e-98 357.5
Bhi09g00249 . 333 624 Strubbelig Receptor Gene Family AT3G13065 59.9 2.5e-98 357.5
Bhi09g00251 . 333 624 Strubbelig Receptor Gene Family AT3G13065 59.9 2.5e-98 357.5
Bhi08g00819 . 306 597 Strubbelig Receptor Gene Family AT3G13065 53.8 9.1e-88 322.4
Bhi08g00818 . 388 681 Strubbelig Receptor Gene Family AT1G11130 53.4 9.4e-85 312.4
Bhi08g00819 . 304 597 Strubbelig Receptor Gene Family AT1G11130 53.4 9.4e-85 312.4
Bhi04g01996 . 392 679 Strubbelig Receptor Gene Family AT1G11130 50.3 7.7e-79 292.7
Bhi11g02653 . 13 735 Strubbelig Receptor Gene Family AT5G06820 54.3 3.1e-187 652.9
Bhi05g01832 . 34 781 Strubbelig Receptor Gene Family AT4G03390 60.8 1.1e-201 701.0
Bhi03g00471 . 17 750 Strubbelig Receptor Gene Family AT4G03390 51.0 2.2e-159 560.5
Bhi03g00470 . 17 747 Strubbelig Receptor Gene Family AT4G03390 50.8 3.6e-157 553.1
Bhi03g00472 . 1 650 Strubbelig Receptor Gene Family AT4G03390 51.4 4.8e-138 489.6
Bhi09g00253 CCT 393 687 Strubbelig Receptor Gene Family AT4G03390 57.7 2.9e-90 330.9
Bhi09g00252 . 346 640 Strubbelig Receptor Gene Family AT4G03390 57.7 2.9e-90 330.9
Bhi09g00250 . 332 626 Strubbelig Receptor Gene Family AT4G03390 57.7 2.9e-90 330.9
Bhi09g00249 . 332 626 Strubbelig Receptor Gene Family AT4G03390 57.7 2.9e-90 330.9
Bhi09g00251 . 332 626 Strubbelig Receptor Gene Family AT4G03390 57.7 2.9e-90 330.9
Bhi04g01996 . 2 679 Strubbelig Receptor Gene Family AT3G13065 52.2 4.3e-146 516.2
Bhi09g00252 . 347 638 Strubbelig Receptor Gene Family AT3G13065 59.9 2.5e-98 357.5
Bhi09g00250 . 333 624 Strubbelig Receptor Gene Family AT3G13065 59.9 2.5e-98 357.5
Bhi09g00249 . 333 624 Strubbelig Receptor Gene Family AT3G13065 59.9 2.5e-98 357.5
Bhi09g00251 . 333 624 Strubbelig Receptor Gene Family AT3G13065 59.9 2.5e-98 357.5
Bhi08g00819 . 306 597 Strubbelig Receptor Gene Family AT3G13065 53.8 9.1e-88 322.4
Bhi04g01996 . 22 701 Strubbelig Receptor Gene Family AT1G78980 61.0 3.6e-193 672.5
Bhi01g02817 . 23 719 Strubbelig Receptor Gene Family AT1G78980 51.3 2.4e-152 537.0
Bhi01g02818 CCT 63 577 Strubbelig Receptor Gene Family AT1G78980 50.3 3.1e-128 456.8
Bhi09g00253 CCT 24 690 Strubbelig Receptor Gene Family AT1G78980 50.4 6.1e-124 442.6
Bhi09g00252 . 2 643 Strubbelig Receptor Gene Family AT1G78980 50.2 1.8e-115 414.5
Bhi09g00250 . 41 629 Strubbelig Receptor Gene Family AT1G78980 50.6 7.8e-111 399.1
Bhi09g00249 . 41 629 Strubbelig Receptor Gene Family AT1G78980 50.6 7.8e-111 399.1
Bhi09g00251 . 41 629 Strubbelig Receptor Gene Family AT1G78980 50.6 7.8e-111 399.1
Bhi03g00472 . 354 650 Strubbelig Receptor Gene Family AT1G78980 52.0 5.4e-80 296.6
Bhi01g02817 . 13 719 Strubbelig Receptor Gene Family AT1G53730 60.6 3.0e-211 732.6
Bhi09g00253 CCT 1 712 Strubbelig Receptor Gene Family AT1G53730 60.0 1.4e-184 644.0
Bhi01g02818 CCT 63 577 Strubbelig Receptor Gene Family AT1G53730 62.3 1.0e-174 611.3
Bhi09g00252 . 2 665 Strubbelig Receptor Gene Family AT1G53730 61.6 3.3e-173 606.3
Bhi09g00250 . 41 651 Strubbelig Receptor Gene Family AT1G53730 65.0 1.4e-171 600.9
Bhi09g00249 . 41 651 Strubbelig Receptor Gene Family AT1G53730 65.0 1.4e-171 600.9
Bhi09g00251 . 41 651 Strubbelig Receptor Gene Family AT1G53730 65.0 1.4e-171 600.9
Bhi04g01996 . 20 687 Strubbelig Receptor Gene Family AT1G53730 51.4 1.5e-154 544.3
Bhi08g00818 . 4 689 Strubbelig Receptor Gene Family AT1G53730 51.4 1.3e-148 524.6
Bhi08g00819 . 2 605 Strubbelig Receptor Gene Family AT1G53730 54.2 8.8e-126 448.7
Bhi01g02817 . 11 714 Strubbelig Receptor Gene Family AT3G14350 51.9 1.5e-183 640.6
Bhi09g00253 CCT 6 702 Strubbelig Receptor Gene Family AT3G14350 55.4 5.8e-167 585.5
Bhi09g00252 . 2 655 Strubbelig Receptor Gene Family AT3G14350 55.9 6.2e-153 538.9
Bhi09g00250 . 41 641 Strubbelig Receptor Gene Family AT3G14350 58.9 1.7e-150 530.8
Bhi09g00249 . 41 641 Strubbelig Receptor Gene Family AT3G14350 58.9 1.7e-150 530.8
Bhi09g00251 . 41 641 Strubbelig Receptor Gene Family AT3G14350 58.9 1.7e-150 530.8
Bhi01g02818 CCT 1 572 Strubbelig Receptor Gene Family AT3G14350 52.2 3.6e-145 513.1
Bhi08g00818 . 201 711 Strubbelig Receptor Gene Family AT4G22130 68.2 1.3e-177 620.5
Bhi08g00819 . 118 627 Strubbelig Receptor Gene Family AT4G22130 68.1 6.5e-177 618.2
Bhi01g02817 . 398 719 Strubbelig Receptor Gene Family AT4G22130 65.7 2.1e-122 437.2
Bhi01g02818 CCT 256 577 Strubbelig Receptor Gene Family AT4G22130 65.7 2.1e-122 437.2
Bhi09g00253 CCT 391 704 Strubbelig Receptor Gene Family AT4G22130 65.5 7.6e-117 418.7
Bhi09g00252 . 344 657 Strubbelig Receptor Gene Family AT4G22130 65.5 7.6e-117 418.7
Bhi09g00250 . 330 643 Strubbelig Receptor Gene Family AT4G22130 65.5 7.6e-117 418.7
Bhi09g00249 . 330 643 Strubbelig Receptor Gene Family AT4G22130 65.5 7.6e-117 418.7
Bhi09g00251 . 330 643 Strubbelig Receptor Gene Family AT4G22130 65.5 7.6e-117 418.7
Bhi05g01832 . 478 773 Strubbelig Receptor Gene Family AT4G22130 62.3 8.4e-108 388.7
Bhi04g01996 . 367 701 Strubbelig Receptor Gene Family AT4G22130 53.9 1.4e-99 361.3
Bhi03g00471 . 464 750 Strubbelig Receptor Gene Family AT4G22130 59.8 1.1e-96 351.7
Bhi03g00470 . 461 747 Strubbelig Receptor Gene Family AT4G22130 59.8 1.1e-96 351.7
Bhi03g00472 . 364 650 Strubbelig Receptor Gene Family AT4G22130 59.8 1.1e-96 351.7
Bhi11g02653 . 387 718 Strubbelig Receptor Gene Family AT4G22130 51.0 1.1e-94 345.1
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003013 1 3 1 1 1 1 2 1 1 2 1 0 3 2 1 2 1 1 3 1 2 2 2 1 2 2 2 1 0 1 44
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88461 PF07714 PK_Tyr_Ser-Thr 4.60E-35 CL0016 Bhi PK