Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g02674 AAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAAAAAATTCCCCCCCCTCCCCTTCCTTCCCCTAATAGATCCCATTTTTTCCCCATGGATGACCCTTCCACTAACTTCTTCTTCACAAATCTCTTCAAATTCAACTCTCCCACCACTACCAATTTCCTTCACTACCCTTCTTCTTCTTCAAACCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTCCTCCCCCTCCCAATTTCTTCCCCACTTTCCACCACCACGCGCCACCGCCATCCTCTCCGCCGCTCCGCCAAGCTCTCCCTCTCCTTAGCCTTAGCCCCACAAGATCATCATCACAAGAAAAAAACAACAAAGAGGAAGAAAAGGAAGAAACTTTAATGAGAGTTGCACTTCATATAGGGTTACCAAGCCCTAGGGTTGAAGAAGAAGAAGAAATAGAAGAAGAAGAAGATGAAGAAATAGAAGAAGAAGAAGAAGAATTAGAAGATCAAGAAGAAGAAGAAGTAGCAATTTCAGGATTGTGTTTGAGTAATAGTAGACTTAACAAAGGACAATATTGGATCCCAACTCCTTCACAAATCCTCATTGGACCTACTCAATTCTCTTGTCCTGTTTGTTACAAAACCTTCAATAGATATAACAACATGCAGATGCACATGTGGGGGCATGGGTCACAATACAGGAGAGGACCAGAATCGTTAAGAGGAACACAGCCAACAGGGATGTTGAGGCTGCCATGCTATTGCTGTTCACCAGGTTGCCGCAACAACATTGACCATCCAAGAGCAAAGCCATTAAAAGATTTCAGAACTCTTCAAACTCACTACAAACGCAAGCATGGAATCAAGCCTTTTATGTGTAGGAAATGTGGGAAAGCCTTTGCTGTTAGAGGAGATTGGAGAACTCATGAGAAGAATTGTGGAAAGCTTTGGTATTGCATTTGTGGCTCTGATTTTAAGCACAAAAGATCTCTCAAAGACCACATCAAAGCCTTTGGAAATGGCCATGCTGCTTATAATCATACTAATAATAATAATGCTAATAACAACAATAATCCCGATCATCGTCGTCATCATCATCGGCATCATCGTCTCCATGGGTTCGATGAAGAGGATGATCATGCTTATTCTGAAGTTGAGCAAGATCATGATTGATTTTGTTCTATTTCTTCTCTAATGGGAATTATTGGGTCATTAGTATGTTCTTATATATATATATATGGGGGTTCTAGGGAACAATATTCTTATGATCTATATATATATATCTTATATGTTACAAAATCCAGTTTTTTCTTTTCTTTTCTTTTTAAGCTATTTTAGCCAAAGCTTTTTTGTATATTGAATTTGCCATTTTTAATCAACTCTCTTGGT 1365 39.05 MDDPSTNFFFTNLFKFNSPTTTNFLHYPSSSSNPPPPPPPPPSPPPPNFFPTFHHHAPPPSSPPLRQALPLLSLSPTRSSSQEKNNKEEEKEETLMRVALHIGLPSPRVEEEEEIEEEEDEEIEEEEEELEDQEEEEVAISGLCLSNSRLNKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAYNHTNNNNANNNNNPDHRRHHHRHHRLHGFDEEDDHAYSEVEQDHD 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 71997724 72000710 - XM_039047796.1 Bhi11g02674 51386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g02674 353 MobiDBLite consensus disorder prediction 306 320 - -
Bhi11g02674 353 SMART c2h2final6 170 192 IPR013087 -
Bhi11g02674 353 SMART c2h2final6 254 274 IPR013087 -
Bhi11g02674 353 MobiDBLite consensus disorder prediction 334 353 - -
Bhi11g02674 353 MobiDBLite consensus disorder prediction 82 97 - -
Bhi11g02674 353 MobiDBLite consensus disorder prediction 305 353 - -
Bhi11g02674 353 MobiDBLite consensus disorder prediction 110 135 - -
Bhi11g02674 353 PANTHER ZINC FINGER PROTEIN WIP2 2 320 IPR043584 GO:0003700|GO:0010468
Bhi11g02674 353 Gene3D Classic Zinc Finger 169 192 - -
Bhi11g02674 353 SUPERFAMILY beta-beta-alpha zinc fingers 236 274 IPR036236 -
Bhi11g02674 353 MobiDBLite consensus disorder prediction 21 135 - -
Bhi11g02674 353 ProSiteProfiles Zinc finger C2H2 type domain profile. 254 274 IPR013087 -
Bhi11g02674 353 Coils Coil 108 143 - -
Bhi11g02674 353 ProSiteProfiles Zinc finger C2H2 type domain profile. 170 197 IPR013087 -
Bhi11g02674 353 ProSitePatterns Zinc finger C2H2 type domain signature. 172 192 IPR013087 -
Bhi11g02674 353 PANTHER ZINC FINGER PROTEIN WIP2 2 320 - -
Bhi11g02674 353 MobiDBLite consensus disorder prediction 30 66 - -
Bhi11g02674 353 Gene3D Classic Zinc Finger 232 311 - -
Bhi11g02674 353 SUPERFAMILY beta-beta-alpha zinc fingers 166 192 IPR036236 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02640 Bhi-Chr3:65026987 Bhi11g02674 Bhi-Chr11:71997724 1.21E-121 dispersed
Bhi08g00052 Bhi-Chr8:2362901 Bhi11g02674 Bhi-Chr11:71997724 3.29E-99 dispersed
Bhi09g00631 Bhi-Chr9:13448686 Bhi11g02674 Bhi-Chr11:71997724 1.43E-102 dispersed
Bhi11g02674 Bhi-Chr11:71997724 Bhi12g01374 Bhi-Chr12:43202260 2.32E-101 dispersed
Bhi11g02674 Bhi-Chr11:71997724 Bhi10g00326 Bhi-Chr10:7041205 1.42E-116 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2520 None None None None Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g02674 - - csv:101208110 467.233